RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 SCYL3Q8IZE3 742 aa17.35■□□□□ 0.37
HMGCR-208ENST00000509431 USP38Q8NB14 1042 aa17.35■□□□□ 0.37
HMGCR-208ENST00000509431 ADAMTS19Q8TE59 1207 aa17.35■□□□□ 0.37
HMGCR-208ENST00000509431 SUGT1Q9Y2Z0 365 aa17.35■□□□□ 0.37
HMGCR-208ENST00000509431 AFG3L2Q9Y4W6 797 aa17.35■□□□□ 0.37
HMGCR-208ENST00000509431 PLIN1O60240 522 aa17.34■□□□□ 0.37
HMGCR-208ENST00000509431 PTPRAP18433 802 aa17.34■□□□□ 0.37
HMGCR-208ENST00000509431 GYG1P46976 350 aa17.34■□□□□ 0.37
HMGCR-208ENST00000509431 GRIK5Q16478 980 aa17.34■□□□□ 0.37
HMGCR-208ENST00000509431 HHIPL2Q6UWX4 724 aa17.34■□□□□ 0.37
HMGCR-208ENST00000509431 FAM84BQ96KN1 310 aaPredicted RBP17.34■□□□□ 0.37
HMGCR-208ENST00000509431 UHRF1Q96T88 793 aaPredicted RBP17.34■□□□□ 0.37
HMGCR-208ENST00000509431 MYH16Q9H6N6 1097 aa17.34■□□□□ 0.37
HMGCR-208ENST00000509431 XRCC5P13010 732 aaKnown RBP17.33■□□□□ 0.36
HMGCR-208ENST00000509431 LDHAL6AQ6ZMR3 332 aa17.33■□□□□ 0.36
HMGCR-208ENST00000509431 ASB2Q96Q27 587 aa17.33■□□□□ 0.36
HMGCR-208ENST00000509431 CDH23Q9H251 3354 aa17.33■□□□□ 0.36
HMGCR-208ENST00000509431 PLXNB2O15031 1838 aa17.33■□□□□ 0.36
HMGCR-208ENST00000509431 ELL2O00472 640 aaPredicted RBP17.32■□□□□ 0.36
HMGCR-208ENST00000509431 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
HMGCR-208ENST00000509431 LHX8Q68G74 356 aa17.32■□□□□ 0.36
HMGCR-208ENST00000509431 IL27Q8NEV9 243 aa17.32■□□□□ 0.36
HMGCR-208ENST00000509431 PCGF6Q9BYE7 350 aa17.32■□□□□ 0.36
HMGCR-208ENST00000509431 CNNM1Q9NRU3 951 aa17.32■□□□□ 0.36
HMGCR-208ENST00000509431 THEGQ9P2T0 379 aa17.32■□□□□ 0.36
HMGCR-208ENST00000509431 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
HMGCR-208ENST00000509431 TAF7LQ5H9L4 462 aa17.31■□□□□ 0.36
HMGCR-208ENST00000509431 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
HMGCR-208ENST00000509431 SOCS4Q8WXH5 440 aa17.31■□□□□ 0.36
HMGCR-208ENST00000509431 SENP6Q9GZR1 1112 aaPredicted RBP17.31■□□□□ 0.36
HMGCR-208ENST00000509431 FRMPD3Q5JV73 1810 aa17.31■□□□□ 0.36
HMGCR-208ENST00000509431 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
HMGCR-208ENST00000509431 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
HMGCR-208ENST00000509431 MRPS5P82675 430 aaKnown RBP17.3■□□□□ 0.36
HMGCR-208ENST00000509431 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
HMGCR-208ENST00000509431 NUDT12Q9BQG2 462 aa17.3■□□□□ 0.36
HMGCR-208ENST00000509431 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
HMGCR-208ENST00000509431 CHMP3Q9Y3E7 222 aa17.3■□□□□ 0.36
HMGCR-208ENST00000509431 PHF20L1A8MW92 1017 aa17.29■□□□□ 0.36
HMGCR-208ENST00000509431 ZKSCAN1P17029 563 aaPredicted RBP17.29■□□□□ 0.36
HMGCR-208ENST00000509431 CYP2B6P20813 491 aa17.29■□□□□ 0.36
HMGCR-208ENST00000509431 CACNB2Q08289 660 aaPredicted RBP17.29■□□□□ 0.36
HMGCR-208ENST00000509431 TCP10Q12799 353 aa17.29■□□□□ 0.36
HMGCR-208ENST00000509431 PABPC4Q13310 644 aaKnown RBP eCLIP17.29■□□□□ 0.36
HMGCR-208ENST00000509431 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
HMGCR-208ENST00000509431 FBXO33Q7Z6M2 555 aa17.29■□□□□ 0.36
HMGCR-208ENST00000509431 PROCA1Q8NCQ7 364 aaPredicted RBP17.29■□□□□ 0.36
HMGCR-208ENST00000509431 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
HMGCR-208ENST00000509431 SNX27Q96L92 541 aa17.29■□□□□ 0.36
HMGCR-208ENST00000509431 IFT57Q9NWB7 429 aa17.29■□□□□ 0.36
HMGCR-208ENST00000509431 DOCK1Q14185 1865 aa17.29■□□□□ 0.36
HMGCR-208ENST00000509431 DOCK2Q92608 1830 aa17.28■□□□□ 0.36
HMGCR-208ENST00000509431 RTP1P59025 263 aa17.28■□□□□ 0.36
HMGCR-208ENST00000509431 GNAI1P63096 354 aa17.28■□□□□ 0.36
HMGCR-208ENST00000509431 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
HMGCR-208ENST00000509431 GRIN2CQ14957 1233 aa17.28■□□□□ 0.36
HMGCR-208ENST00000509431 BDP1A6H8Y1 2624 aa17.27■□□□□ 0.36
HMGCR-208ENST00000509431 TRIM75PA6NK02 468 aa17.27■□□□□ 0.36
HMGCR-208ENST00000509431 FOXO4P98177 505 aa17.27■□□□□ 0.36
HMGCR-208ENST00000509431 AKNAD1Q5T1N1 836 aa17.27■□□□□ 0.36
HMGCR-208ENST00000509431 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
HMGCR-208ENST00000509431 STK31Q9BXU1 1019 aa17.27■□□□□ 0.36
HMGCR-208ENST00000509431 CTNND1O60716 968 aaKnown RBP17.26■□□□□ 0.35
HMGCR-208ENST00000509431 CCND3P30281 292 aaPredicted RBP17.26■□□□□ 0.35
HMGCR-208ENST00000509431 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
HMGCR-208ENST00000509431 CAVIN4Q5BKX8 364 aa17.26■□□□□ 0.35
HMGCR-208ENST00000509431 TREML2Q5T2D2 321 aa17.26■□□□□ 0.35
HMGCR-208ENST00000509431 C8orf58Q8NAV2 365 aa17.26■□□□□ 0.35
HMGCR-208ENST00000509431 LINS1Q8NG48 757 aa17.26■□□□□ 0.35
HMGCR-208ENST00000509431 GAS2L1Q99501 681 aaPredicted RBP17.26■□□□□ 0.35
HMGCR-208ENST00000509431 MORF4L1Q9UBU8 362 aa17.26■□□□□ 0.35
HMGCR-208ENST00000509431 IQSEC3Q9UPP2 1182 aaPredicted RBP17.26■□□□□ 0.35
HMGCR-208ENST00000509431 LRRFIP2Q9Y608 721 aaKnown RBP17.26■□□□□ 0.35
HMGCR-208ENST00000509431 ATRNL1Q5VV63 1379 aa17.26■□□□□ 0.35
HMGCR-208ENST00000509431 LOC285556D6RIA3 1793 aa17.25■□□□□ 0.35
HMGCR-208ENST00000509431 MSCO60682 206 aa17.25■□□□□ 0.35
HMGCR-208ENST00000509431 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
HMGCR-208ENST00000509431 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
HMGCR-208ENST00000509431 CDC42EP5Q6NZY7 148 aa17.25■□□□□ 0.35
HMGCR-208ENST00000509431 BADQ92934 168 aa17.25■□□□□ 0.35
HMGCR-208ENST00000509431 ZNF594Q96JF6 807 aaPredicted RBP17.25■□□□□ 0.35
HMGCR-208ENST00000509431 DNAH12Q6ZR08 3092 aa17.24■□□□□ 0.35
HMGCR-208ENST00000509431 MYO9BQ13459 2157 aa17.24■□□□□ 0.35
HMGCR-208ENST00000509431 DNM1LO00429 736 aa17.24■□□□□ 0.35
HMGCR-208ENST00000509431 MAP3K10Q02779 954 aa17.24■□□□□ 0.35
HMGCR-208ENST00000509431 NFIAQ12857 509 aa17.24■□□□□ 0.35
HMGCR-208ENST00000509431 LMBR1LQ6UX01 489 aa17.24■□□□□ 0.35
HMGCR-208ENST00000509431 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
HMGCR-208ENST00000509431 FAM198AQ9UFP1 575 aa17.24■□□□□ 0.35
HMGCR-208ENST00000509431 RLFQ13129 1914 aa17.23■□□□□ 0.35
HMGCR-208ENST00000509431 DNAJB2P25686 324 aa17.23■□□□□ 0.35
HMGCR-208ENST00000509431 RGS2P41220 211 aa17.23■□□□□ 0.35
HMGCR-208ENST00000509431 LRFN3Q9BTN0 628 aa17.23■□□□□ 0.35
HMGCR-208ENST00000509431 TBC1D2Q9BYX2 928 aa17.23■□□□□ 0.35
HMGCR-208ENST00000509431 ZNF576Q9H609 170 aa17.23■□□□□ 0.35
HMGCR-208ENST00000509431 ATP11BQ9Y2G3 1177 aa17.23■□□□□ 0.35
HMGCR-208ENST00000509431 MAPK4P31152 587 aa17.22■□□□□ 0.35
HMGCR-208ENST00000509431 LPAR1Q92633 364 aa17.22■□□□□ 0.35
HMGCR-208ENST00000509431 ASCC2Q9H1I8 757 aaPredicted RBP17.22■□□□□ 0.35
HMGCR-208ENST00000509431 PRDM5Q9NQX1 630 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms