RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 MANSC4A6NHS7 340 aaPredicted RBP19.68■□□□□ 0.74
PDLIM5-212ENST00000509333 BAG3O95817 575 aa19.68■□□□□ 0.74
PDLIM5-212ENST00000509333 ATP5JP18859 108 aa19.68■□□□□ 0.74
PDLIM5-212ENST00000509333 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
PDLIM5-212ENST00000509333 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
PDLIM5-212ENST00000509333 IDH1O75874 414 aaKnown RBP19.67■□□□□ 0.74
PDLIM5-212ENST00000509333 CYP7A1P22680 504 aa19.67■□□□□ 0.74
PDLIM5-212ENST00000509333 SH3RF3Q8TEJ3 882 aaPredicted RBP19.67■□□□□ 0.74
PDLIM5-212ENST00000509333 OPTNQ96CV9 577 aa19.67■□□□□ 0.74
PDLIM5-212ENST00000509333 MS4A4AQ96JQ5 239 aa19.67■□□□□ 0.74
PDLIM5-212ENST00000509333 WRNIP1Q96S55 665 aa19.67■□□□□ 0.74
PDLIM5-212ENST00000509333 AATFQ9NY61 560 aaKnown RBP eCLIP19.67■□□□□ 0.74
PDLIM5-212ENST00000509333 CSADQ9Y600 493 aa19.67■□□□□ 0.74
PDLIM5-212ENST00000509333 PHF20L1A8MW92 1017 aa19.66■□□□□ 0.74
PDLIM5-212ENST00000509333 INPP5BP32019 993 aa19.66■□□□□ 0.74
PDLIM5-212ENST00000509333 SREBF2Q12772 1141 aa19.66■□□□□ 0.74
PDLIM5-212ENST00000509333 MAP3K12Q12852 859 aa19.66■□□□□ 0.74
PDLIM5-212ENST00000509333 PICALMQ13492 652 aa19.66■□□□□ 0.74
PDLIM5-212ENST00000509333 PTPN18Q99952 460 aa19.66■□□□□ 0.74
PDLIM5-212ENST00000509333 SNCAIPQ9Y6H5 919 aa19.66■□□□□ 0.74
PDLIM5-212ENST00000509333 RFX7Q2KHR2 1363 aa19.66■□□□□ 0.74
PDLIM5-212ENST00000509333 SLURP2P0DP57 97 aa19.65■□□□□ 0.74
PDLIM5-212ENST00000509333 TMED8Q6PL24 325 aaPredicted RBP19.65■□□□□ 0.74
PDLIM5-212ENST00000509333 ERO1BQ86YB8 467 aa19.65■□□□□ 0.74
PDLIM5-212ENST00000509333 ZSCAN29Q8IWY8 852 aaPredicted RBP19.65■□□□□ 0.74
PDLIM5-212ENST00000509333 TEX11Q8IYF3 940 aa19.65■□□□□ 0.74
PDLIM5-212ENST00000509333 TNS4Q8IZW8 715 aa19.65■□□□□ 0.74
PDLIM5-212ENST00000509333 MAGEB6Q8N7X4 407 aa19.65■□□□□ 0.74
PDLIM5-212ENST00000509333 BOLA2Q9H3K6 86 aa19.65■□□□□ 0.74
PDLIM5-212ENST00000509333 SPDYE5A6NIY4 337 aa19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 TBC1D12O60347 775 aa19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 TBC1D8O95759 1140 aa19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 PLCG2P16885 1265 aa19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 DYNLL1P63167 89 aaKnown RBP19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 TTF1Q15361 905 aaPredicted RBP19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 IFFO2Q5TF58 517 aa19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 IFNL1Q8IU54 200 aa19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 NOL10Q9BSC4 688 aaKnown RBP19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 R3HDMLQ9H3Y0 253 aa19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 ATRNL1Q5VV63 1379 aa19.64■□□□□ 0.73
PDLIM5-212ENST00000509333 TGFBRAP1Q8WUH2 860 aa19.63■□□□□ 0.73
PDLIM5-212ENST00000509333 EDC3Q96F86 508 aaKnown RBP19.63■□□□□ 0.73
PDLIM5-212ENST00000509333 HAUS7Q99871 368 aa19.63■□□□□ 0.73
PDLIM5-212ENST00000509333 CFHR5Q9BXR6 569 aa19.63■□□□□ 0.73
PDLIM5-212ENST00000509333 OSBPL5Q9H0X9 879 aaPredicted RBP19.63■□□□□ 0.73
PDLIM5-212ENST00000509333 AK9Q5TCS8 1911 aa19.63■□□□□ 0.73
PDLIM5-212ENST00000509333 IGF2BP3O00425 579 aaKnown RBP eCLIP19.62■□□□□ 0.73
PDLIM5-212ENST00000509333 GOLIM4O00461 696 aa19.62■□□□□ 0.73
PDLIM5-212ENST00000509333 NOL9Q5SY16 702 aaKnown RBP19.62■□□□□ 0.73
PDLIM5-212ENST00000509333 DNAJC2Q99543 621 aaKnown RBP19.62■□□□□ 0.73
PDLIM5-212ENST00000509333 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
PDLIM5-212ENST00000509333 CASP8AP2Q9UKL3 1982 aa19.62■□□□□ 0.73
PDLIM5-212ENST00000509333 MYO5AQ9Y4I1 1855 aaKnown RBP19.62■□□□□ 0.73
PDLIM5-212ENST00000509333 IRF6O14896 467 aa19.61■□□□□ 0.73
PDLIM5-212ENST00000509333 ALDH1A1P00352 501 aa19.61■□□□□ 0.73
PDLIM5-212ENST00000509333 GTF2A2P52657 109 aa19.61■□□□□ 0.73
PDLIM5-212ENST00000509333 PPATQ06203 517 aa19.61■□□□□ 0.73
PDLIM5-212ENST00000509333 AAMPQ13685 434 aa19.61■□□□□ 0.73
PDLIM5-212ENST00000509333 SLC9C2Q5TAH2 1124 aa19.61■□□□□ 0.73
PDLIM5-212ENST00000509333 OTUD5Q96G74 571 aa19.61■□□□□ 0.73
PDLIM5-212ENST00000509333 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
PDLIM5-212ENST00000509333 PAG1Q9NWQ8 432 aa19.61■□□□□ 0.73
PDLIM5-212ENST00000509333 PPIL2Q13356 520 aa19.6■□□□□ 0.73
PDLIM5-212ENST00000509333 FOXP4Q8IVH2 680 aaPredicted RBP19.6■□□□□ 0.73
PDLIM5-212ENST00000509333 MAPKAPK5Q8IW41 473 aa19.6■□□□□ 0.73
PDLIM5-212ENST00000509333 MIGA1Q8NAN2 632 aa19.6■□□□□ 0.73
PDLIM5-212ENST00000509333 BRI3BPQ8WY22 251 aa19.6■□□□□ 0.73
PDLIM5-212ENST00000509333 PI4KBQ9UBF8 816 aa19.6■□□□□ 0.73
PDLIM5-212ENST00000509333 TCRBV5S4A2TA0A5A2 114 aa19.59■□□□□ 0.73
PDLIM5-212ENST00000509333 CTNND1O60716 968 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-212ENST00000509333 PDE6AP16499 860 aa19.59■□□□□ 0.73
PDLIM5-212ENST00000509333 HDAC1Q13547 482 aaPredicted RBP19.59■□□□□ 0.73
PDLIM5-212ENST00000509333 NOM1Q5C9Z4 860 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-212ENST00000509333 OTUD7BQ6GQQ9 843 aa19.59■□□□□ 0.73
PDLIM5-212ENST00000509333 METTL16Q86W50 562 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-212ENST00000509333 RIOK1Q9BRS2 568 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-212ENST00000509333 DHX36Q9H2U1 1008 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-212ENST00000509333 GPR25O00155 361 aa19.58■□□□□ 0.72
PDLIM5-212ENST00000509333 CERS3Q8IU89 383 aa19.58■□□□□ 0.72
PDLIM5-212ENST00000509333 EXOC6Q8TAG9 804 aa19.58■□□□□ 0.72
PDLIM5-212ENST00000509333 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.58■□□□□ 0.72
PDLIM5-212ENST00000509333 PALD1Q9ULE6 856 aa19.58■□□□□ 0.72
PDLIM5-212ENST00000509333 ZNF532Q9HCE3 1301 aa19.57■□□□□ 0.72
PDLIM5-212ENST00000509333 CCL15-CCL14A0A0B4J2E2 113 aa19.57■□□□□ 0.72
PDLIM5-212ENST00000509333 RRP1BQ14684 758 aaKnown RBP19.57■□□□□ 0.72
PDLIM5-212ENST00000509333 CCL15Q16663 113 aa19.57■□□□□ 0.72
PDLIM5-212ENST00000509333 SCYL3Q8IZE3 742 aa19.57■□□□□ 0.72
PDLIM5-212ENST00000509333 KCNH4Q9UQ05 1017 aa19.57■□□□□ 0.72
PDLIM5-212ENST00000509333 FAM196BA6NMK8 535 aa19.56■□□□□ 0.72
PDLIM5-212ENST00000509333 CETPP11597 493 aa19.56■□□□□ 0.72
PDLIM5-212ENST00000509333 PTPRAP18433 802 aa19.56■□□□□ 0.72
PDLIM5-212ENST00000509333 SNAPC2Q13487 334 aa19.56■□□□□ 0.72
PDLIM5-212ENST00000509333 SLFNL1Q499Z3 407 aa19.56■□□□□ 0.72
PDLIM5-212ENST00000509333 FAM43AQ8N2R8 423 aa19.56■□□□□ 0.72
PDLIM5-212ENST00000509333 ZNF296Q8WUU4 475 aaPredicted RBP19.56■□□□□ 0.72
PDLIM5-212ENST00000509333 ZHX2Q9Y6X8 837 aa19.56■□□□□ 0.72
PDLIM5-212ENST00000509333 FLT1P17948 1338 aa19.55■□□□□ 0.72
PDLIM5-212ENST00000509333 MAGEB6P1A0A0J9YX57 407 aa19.55■□□□□ 0.72
PDLIM5-212ENST00000509333 CXCL11O14625 94 aa19.55■□□□□ 0.72
PDLIM5-212ENST00000509333 ADD2P35612 726 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms