RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 MROH7-TTC4A0A0A0MT08 1334 aa15.41■□□□□ 0.06
PDPN-208ENST00000509009 ATRNL1Q5VV63 1379 aa15.4■□□□□ 0.06
PDPN-208ENST00000509009 SURF6O75683 361 aaKnown RBP15.4■□□□□ 0.06
PDPN-208ENST00000509009 UQCRFS1P1P0C7P4 283 aa15.4■□□□□ 0.06
PDPN-208ENST00000509009 MCAMP43121 646 aa15.4■□□□□ 0.06
PDPN-208ENST00000509009 MOGSQ13724 837 aa15.4■□□□□ 0.06
PDPN-208ENST00000509009 ARHGEF6Q15052 776 aa15.4■□□□□ 0.06
PDPN-208ENST00000509009 ZSCAN29Q8IWY8 852 aaPredicted RBP15.4■□□□□ 0.06
PDPN-208ENST00000509009 C1orf115Q9H7X2 142 aa15.4■□□□□ 0.06
PDPN-208ENST00000509009 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
PDPN-208ENST00000509009 HTTP42858 3142 aa15.4■□□□□ 0.06
PDPN-208ENST00000509009 CXCL11O14625 94 aa15.39■□□□□ 0.05
PDPN-208ENST00000509009 NPM3O75607 178 aaKnown RBP15.39■□□□□ 0.05
PDPN-208ENST00000509009 SLURP2P0DP57 97 aa15.39■□□□□ 0.05
PDPN-208ENST00000509009 GSTO1P78417 241 aa15.39■□□□□ 0.05
PDPN-208ENST00000509009 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
PDPN-208ENST00000509009 ANKRD23Q86SG2 305 aa15.39■□□□□ 0.05
PDPN-208ENST00000509009 FTSJ3Q8IY81 847 aaKnown RBP15.39■□□□□ 0.05
PDPN-208ENST00000509009 RAI14Q9P0K7 980 aa15.39■□□□□ 0.05
PDPN-208ENST00000509009 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
PDPN-208ENST00000509009 RFX7Q2KHR2 1363 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 MAP4K4O95819 1239 aaPredicted RBP15.38■□□□□ 0.05
PDPN-208ENST00000509009 OS9Q13438 667 aaPredicted RBP15.38■□□□□ 0.05
PDPN-208ENST00000509009 PICALMQ13492 652 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 C17orf99Q6UX52 265 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 ITPRIPQ8IWB1 547 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 ARMC5Q96C12 935 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 DBNDD2Q9BQY9 259 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 SNRKQ9NRH2 765 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 LRP2BPQ9P2M1 347 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 ZHX2Q9Y6X8 837 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 MYH2Q9UKX2 1941 aa15.38■□□□□ 0.05
PDPN-208ENST00000509009 AK9Q5TCS8 1911 aa15.37■□□□□ 0.05
PDPN-208ENST00000509009 PDHXO00330 501 aa15.37■□□□□ 0.05
PDPN-208ENST00000509009 PTPRAP18433 802 aa15.37■□□□□ 0.05
PDPN-208ENST00000509009 CCDC158Q5M9N0 1113 aa15.37■□□□□ 0.05
PDPN-208ENST00000509009 GPAT2Q6NUI2 795 aa15.37■□□□□ 0.05
PDPN-208ENST00000509009 SCYL3Q8IZE3 742 aa15.37■□□□□ 0.05
PDPN-208ENST00000509009 ARHGAP39Q9C0H5 1083 aa15.37■□□□□ 0.05
PDPN-208ENST00000509009 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
PDPN-208ENST00000509009 KIAA0100Q14667 2235 aaKnown RBP15.36■□□□□ 0.05
PDPN-208ENST00000509009 POTEFA5A3E0 1075 aa15.36■□□□□ 0.05
PDPN-208ENST00000509009 TBC1D12O60347 775 aa15.36■□□□□ 0.05
PDPN-208ENST00000509009 CTNND1O60716 968 aaKnown RBP15.36■□□□□ 0.05
PDPN-208ENST00000509009 LACTBP83111 547 aaPredicted RBP15.36■□□□□ 0.05
PDPN-208ENST00000509009 KIF22Q14807 665 aa15.36■□□□□ 0.05
PDPN-208ENST00000509009 TTC39AQ5SRH9 613 aa15.36■□□□□ 0.05
PDPN-208ENST00000509009 ZNF512BQ96KM6 892 aaPredicted RBP15.36■□□□□ 0.05
PDPN-208ENST00000509009 PICK1Q9NRD5 415 aa15.36■□□□□ 0.05
PDPN-208ENST00000509009 CPA4Q9UI42 421 aa15.36■□□□□ 0.05
PDPN-208ENST00000509009 AFG3L2Q9Y4W6 797 aa15.36■□□□□ 0.05
PDPN-208ENST00000509009 CYP2E1P05181 493 aaPredicted RBP15.35■□□□□ 0.05
PDPN-208ENST00000509009 PANK1Q8TE04 598 aa15.35■□□□□ 0.05
PDPN-208ENST00000509009 PTCH2Q9Y6C5 1203 aa15.35■□□□□ 0.05
PDPN-208ENST00000509009 PPP4CP60510 307 aa15.34■□□□□ 0.05
PDPN-208ENST00000509009 CEP85Q6P2H3 762 aa15.34■□□□□ 0.05
PDPN-208ENST00000509009 FASTKD5Q7L8L6 764 aaKnown RBP15.34■□□□□ 0.05
PDPN-208ENST00000509009 TEX11Q8IYF3 940 aa15.34■□□□□ 0.05
PDPN-208ENST00000509009 EAF2Q96CJ1 260 aaPredicted RBP15.34■□□□□ 0.05
PDPN-208ENST00000509009 CCDC8Q9H0W5 538 aaPredicted RBP15.34■□□□□ 0.05
PDPN-208ENST00000509009 ADGRA2Q96PE1 1338 aa15.34■□□□□ 0.05
PDPN-208ENST00000509009 A0A0G2JLL6 359 aaPredicted RBP15.33■□□□□ 0.04
PDPN-208ENST00000509009 GNRH1P01148 92 aa15.33■□□□□ 0.04
PDPN-208ENST00000509009 CTGFP29279 349 aa15.33■□□□□ 0.04
PDPN-208ENST00000509009 ZAP70P43403 619 aa15.33■□□□□ 0.04
PDPN-208ENST00000509009 NAA16Q6N069 864 aaPredicted RBP15.33■□□□□ 0.04
PDPN-208ENST00000509009 PRRT2Q7Z6L0 340 aaPredicted RBP15.33■□□□□ 0.04
PDPN-208ENST00000509009 NBPF11Q86T75 865 aa15.33■□□□□ 0.04
PDPN-208ENST00000509009 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.04
PDPN-208ENST00000509009 ZNF333Q96JL9 665 aa15.33■□□□□ 0.04
PDPN-208ENST00000509009 OSBPL5Q9H0X9 879 aaPredicted RBP15.33■□□□□ 0.04
PDPN-208ENST00000509009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.33■□□□□ 0.04
PDPN-208ENST00000509009 DBNLQ9UJU6 430 aaKnown RBP15.33■□□□□ 0.04
PDPN-208ENST00000509009 CENPFP49454 3210 aa15.33■□□□□ 0.04
PDPN-208ENST00000509009 FAM196BA6NMK8 535 aa15.32■□□□□ 0.04
PDPN-208ENST00000509009 IGSF3O75054 1194 aa15.32■□□□□ 0.04
PDPN-208ENST00000509009 BAG3O95817 575 aa15.32■□□□□ 0.04
PDPN-208ENST00000509009 CYP2C8P10632 490 aa15.32■□□□□ 0.04
PDPN-208ENST00000509009 EN2P19622 333 aaPredicted RBP15.32■□□□□ 0.04
PDPN-208ENST00000509009 PSMC4P43686 418 aa15.32■□□□□ 0.04
PDPN-208ENST00000509009 PRMT2P55345 433 aa15.32■□□□□ 0.04
PDPN-208ENST00000509009 SLC9C1Q4G0N8 1177 aa15.32■□□□□ 0.04
PDPN-208ENST00000509009 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
PDPN-208ENST00000509009 TRIM47Q96LD4 638 aa15.32■□□□□ 0.04
PDPN-208ENST00000509009 NOL10Q9BSC4 688 aaKnown RBP15.32■□□□□ 0.04
PDPN-208ENST00000509009 PIH1D3Q9NQM4 214 aaKnown RBP15.32■□□□□ 0.04
PDPN-208ENST00000509009 AATFQ9NY61 560 aaKnown RBP eCLIP15.32■□□□□ 0.04
PDPN-208ENST00000509009 TLR7Q9NYK1 1049 aaKnown RBP15.32■□□□□ 0.04
PDPN-208ENST00000509009 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.32■□□□□ 0.04
PDPN-208ENST00000509009 ECM2O94769 699 aaPredicted RBP15.31■□□□□ 0.04
PDPN-208ENST00000509009 BCRP11274 1271 aa15.31■□□□□ 0.04
PDPN-208ENST00000509009 RRP1BQ14684 758 aaKnown RBP15.31■□□□□ 0.04
PDPN-208ENST00000509009 GADL1Q6ZQY3 521 aa15.31■□□□□ 0.04
PDPN-208ENST00000509009 ADGRA1Q86SQ6 560 aa15.31■□□□□ 0.04
PDPN-208ENST00000509009 PARK7Q99497 189 aaKnown RBP15.31■□□□□ 0.04
PDPN-208ENST00000509009 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
PDPN-208ENST00000509009 TRIM75PA6NK02 468 aa15.3■□□□□ 0.04
PDPN-208ENST00000509009 FMNL1O95466 1100 aaPredicted RBP15.3■□□□□ 0.04
PDPN-208ENST00000509009 MS4A1P11836 297 aa15.3■□□□□ 0.04
PDPN-208ENST00000509009 PLCG2P16885 1265 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms