RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 FCGRTP55899 365 aa11.83□□□□□ -0.52
NEDD9-211ENST00000508546 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-211ENST00000508546 METTL24Q5JXM2 366 aa11.83□□□□□ -0.52
NEDD9-211ENST00000508546 WDR63Q8IWG1 891 aa11.83□□□□□ -0.52
NEDD9-211ENST00000508546 MAFAQ8NHW3 353 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-211ENST00000508546 DEFB118Q96PH6 123 aa11.83□□□□□ -0.52
NEDD9-211ENST00000508546 UBE2OQ9C0C9 1292 aaKnown RBP11.83□□□□□ -0.52
NEDD9-211ENST00000508546 SRCIN1Q9C0H9 1055 aa11.83□□□□□ -0.52
NEDD9-211ENST00000508546 UTYO14607 1347 aa11.83□□□□□ -0.52
NEDD9-211ENST00000508546 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
NEDD9-211ENST00000508546 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
NEDD9-211ENST00000508546 FAM109BQ6ICB4 259 aaPredicted RBP11.82□□□□□ -0.52
NEDD9-211ENST00000508546 GPAT2Q6NUI2 795 aa11.82□□□□□ -0.52
NEDD9-211ENST00000508546 DOCK1Q14185 1865 aa11.82□□□□□ -0.52
NEDD9-211ENST00000508546 TMEM265A0A087WTH1 108 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 INHAP05111 366 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 NBPF7P0C2Y1 421 aaPredicted RBP11.81□□□□□ -0.52
NEDD9-211ENST00000508546 ELNP15502 786 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 FGFR2P21802 821 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 SLC4A10Q6U841 1118 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 WDR66Q8TBY9 1149 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 PXYLP1Q8TE99 480 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
NEDD9-211ENST00000508546 GABRQQ9UN88 632 aa11.81□□□□□ -0.52
NEDD9-211ENST00000508546 ADCY3O60266 1144 aa11.8□□□□□ -0.52
NEDD9-211ENST00000508546 TFRCP02786 760 aaKnown RBP11.8□□□□□ -0.52
NEDD9-211ENST00000508546 IFIT1P09914 478 aaKnown RBP11.8□□□□□ -0.52
NEDD9-211ENST00000508546 CYP2C8P10632 490 aa11.8□□□□□ -0.52
NEDD9-211ENST00000508546 TCP10Q12799 353 aa11.8□□□□□ -0.52
NEDD9-211ENST00000508546 IRF5Q13568 498 aa11.8□□□□□ -0.52
NEDD9-211ENST00000508546 CDC42EP5Q6NZY7 148 aa11.8□□□□□ -0.52
NEDD9-211ENST00000508546 FASTKD5Q7L8L6 764 aaKnown RBP11.8□□□□□ -0.52
NEDD9-211ENST00000508546 NECAB2Q7Z6G3 386 aa11.8□□□□□ -0.52
NEDD9-211ENST00000508546 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
NEDD9-211ENST00000508546 SLC45A1Q9Y2W3 748 aa11.8□□□□□ -0.52
NEDD9-211ENST00000508546 DAGLAQ9Y4D2 1042 aa11.8□□□□□ -0.52
NEDD9-211ENST00000508546 A0A0G2JLL6 359 aaPredicted RBP11.79□□□□□ -0.52
NEDD9-211ENST00000508546 TNFRSF10AO00220 468 aa11.79□□□□□ -0.52
NEDD9-211ENST00000508546 FLT3LGP49771 235 aa11.79□□□□□ -0.52
NEDD9-211ENST00000508546 NFIAQ12857 509 aa11.79□□□□□ -0.52
NEDD9-211ENST00000508546 PUM3Q15397 648 aaKnown RBP11.79□□□□□ -0.52
NEDD9-211ENST00000508546 PRRT2Q7Z6L0 340 aaPredicted RBP11.79□□□□□ -0.52
NEDD9-211ENST00000508546 ANKRD44Q8N8A2 993 aa11.79□□□□□ -0.52
NEDD9-211ENST00000508546 SYMPKQ92797 1274 aaKnown RBP11.79□□□□□ -0.52
NEDD9-211ENST00000508546 CDX2Q99626 313 aaPredicted RBP11.79□□□□□ -0.52
NEDD9-211ENST00000508546 FAM198AQ9UFP1 575 aa11.79□□□□□ -0.52
NEDD9-211ENST00000508546 ATRNL1Q5VV63 1379 aa11.79□□□□□ -0.52
NEDD9-211ENST00000508546 PHF20L1A8MW92 1017 aa11.78□□□□□ -0.52
NEDD9-211ENST00000508546 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
NEDD9-211ENST00000508546 SCYL3Q8IZE3 742 aa11.78□□□□□ -0.52
NEDD9-211ENST00000508546 MAST2Q6P0Q8 1798 aa11.77□□□□□ -0.52
NEDD9-211ENST00000508546 NCOR1O75376 2440 aa11.77□□□□□ -0.52
NEDD9-211ENST00000508546 ATAD5Q96QE3 1844 aa11.77□□□□□ -0.52
NEDD9-211ENST00000508546 SLC5A1P13866 664 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 PTPRAP18433 802 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 MAP3K10Q02779 954 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 DIXDC1Q155Q3 683 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 LPIN2Q92539 896 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
NEDD9-211ENST00000508546 PICK1Q9NRD5 415 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 AFG3L2Q9Y4W6 797 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 ZHX2Q9Y6X8 837 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 LOC285556D6RIA3 1793 aa11.77□□□□□ -0.53
NEDD9-211ENST00000508546 PIEZO1Q92508 2521 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 TNPO2O14787 897 aaKnown RBP11.76□□□□□ -0.53
NEDD9-211ENST00000508546 ENTPD3O75355 529 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 PRDX5P30044 214 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 MAP3K12Q12852 859 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 ZFPM1Q8IX07 1006 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 ANKLE1Q8NAG6 615 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 MYLIPQ8WY64 445 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 IDI2Q9BXS1 227 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 USP40Q9NVE5 1235 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 SALL1Q9NSC2 1324 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 LTBP2Q14767 1821 aa11.76□□□□□ -0.53
NEDD9-211ENST00000508546 PLXNB2O15031 1838 aa11.75□□□□□ -0.53
NEDD9-211ENST00000508546 EYA2O00167 538 aa11.75□□□□□ -0.53
NEDD9-211ENST00000508546 ZBTB22O15209 634 aa11.75□□□□□ -0.53
NEDD9-211ENST00000508546 LDHBP07195 334 aaKnown RBP11.75□□□□□ -0.53
NEDD9-211ENST00000508546 MDM2Q00987 491 aaPredicted RBP11.75□□□□□ -0.53
NEDD9-211ENST00000508546 TJAP1Q5JTD0 557 aa11.75□□□□□ -0.53
NEDD9-211ENST00000508546 GADL1Q6ZQY3 521 aa11.75□□□□□ -0.53
NEDD9-211ENST00000508546 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
NEDD9-211ENST00000508546 COA7Q96BR5 231 aa11.75□□□□□ -0.53
NEDD9-211ENST00000508546 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.75□□□□□ -0.53
NEDD9-211ENST00000508546 PFASO15067 1338 aa11.75□□□□□ -0.53
NEDD9-211ENST00000508546 RFX7Q2KHR2 1363 aa11.75□□□□□ -0.53
NEDD9-211ENST00000508546 CTNND1O60716 968 aaKnown RBP11.74□□□□□ -0.53
NEDD9-211ENST00000508546 RFX5P48382 616 aaPredicted RBP11.74□□□□□ -0.53
NEDD9-211ENST00000508546 FAM110CQ1W6H9 321 aa11.74□□□□□ -0.53
NEDD9-211ENST00000508546 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
NEDD9-211ENST00000508546 AGTPBP1Q9UPW5 1226 aa11.74□□□□□ -0.53
NEDD9-211ENST00000508546 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
NEDD9-211ENST00000508546 GAKO14976 1311 aa11.74□□□□□ -0.53
NEDD9-211ENST00000508546 SEMA3EO15041 775 aa11.73□□□□□ -0.53
NEDD9-211ENST00000508546 RGS3P49796 1198 aa11.73□□□□□ -0.53
NEDD9-211ENST00000508546 SH3BP5LQ7L8J4 393 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms