RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 HHIPL1Q96JK4 782 aa22.02■■□□□ 1.12
NPHP4-210ENST00000506941 PLCG2P16885 1265 aa22.01■■□□□ 1.11
NPHP4-210ENST00000506941 PDE4AP27815 886 aa22.01■■□□□ 1.11
NPHP4-210ENST00000506941 VEGFBP49765 207 aa22.01■■□□□ 1.11
NPHP4-210ENST00000506941 RIOK1Q9BRS2 568 aaKnown RBP22.01■■□□□ 1.11
NPHP4-210ENST00000506941 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.01■■□□□ 1.11
NPHP4-210ENST00000506941 ANGEL1Q9UNK9 670 aaKnown RBP22.01■■□□□ 1.11
NPHP4-210ENST00000506941 COL2A1P02458 1487 aaPredicted RBP22.01■■□□□ 1.11
NPHP4-210ENST00000506941 ATRNL1Q5VV63 1379 aa22■■□□□ 1.11
NPHP4-210ENST00000506941 NPM3O75607 178 aaKnown RBP22■■□□□ 1.11
NPHP4-210ENST00000506941 NEFLP07196 543 aa22■■□□□ 1.11
NPHP4-210ENST00000506941 CYP4F22Q6NT55 531 aa22■■□□□ 1.11
NPHP4-210ENST00000506941 DDTLA6NHG4 134 aaPredicted RBP21.99■■□□□ 1.11
NPHP4-210ENST00000506941 USP2O75604 605 aaPredicted RBP21.99■■□□□ 1.11
NPHP4-210ENST00000506941 MAP3K11Q16584 847 aa21.99■■□□□ 1.11
NPHP4-210ENST00000506941 TGFBRAP1Q8WUH2 860 aa21.99■■□□□ 1.11
NPHP4-210ENST00000506941 MYH8P13535 1937 aa21.99■■□□□ 1.11
NPHP4-210ENST00000506941 DOCK1Q14185 1865 aa21.98■■□□□ 1.11
NPHP4-210ENST00000506941 MAGEB6P1A0A0J9YX57 407 aa21.98■■□□□ 1.11
NPHP4-210ENST00000506941 PPP1R12BO60237 982 aaPredicted RBP21.98■■□□□ 1.11
NPHP4-210ENST00000506941 UBE3CQ15386 1083 aa21.98■■□□□ 1.11
NPHP4-210ENST00000506941 LDLRAD1Q5T700 205 aa21.98■■□□□ 1.11
NPHP4-210ENST00000506941 PAXIP1Q6ZW49 1069 aaPredicted RBP21.98■■□□□ 1.11
NPHP4-210ENST00000506941 ARMC9Q7Z3E5 817 aa21.98■■□□□ 1.11
NPHP4-210ENST00000506941 CAPNS2Q96L46 248 aa21.98■■□□□ 1.11
NPHP4-210ENST00000506941 OSBPL5Q9H0X9 879 aaPredicted RBP21.98■■□□□ 1.11
NPHP4-210ENST00000506941 OSBPL3Q9H4L5 887 aa21.98■■□□□ 1.11
NPHP4-210ENST00000506941 FLT1P17948 1338 aa21.98■■□□□ 1.11
NPHP4-210ENST00000506941 ZSCAN25Q6NSZ9 544 aa21.97■■□□□ 1.11
NPHP4-210ENST00000506941 RGMBQ6NW40 437 aa21.97■■□□□ 1.11
NPHP4-210ENST00000506941 MAPKAPK5Q8IW41 473 aa21.97■■□□□ 1.11
NPHP4-210ENST00000506941 LCORLQ8N3X6 602 aa21.97■■□□□ 1.11
NPHP4-210ENST00000506941 WDR33Q9C0J8 1336 aaKnown RBP21.97■■□□□ 1.11
NPHP4-210ENST00000506941 PHIPQ8WWQ0 1821 aa21.96■■□□□ 1.11
NPHP4-210ENST00000506941 FAM155AB1AL88 458 aaPredicted RBP21.96■■□□□ 1.11
NPHP4-210ENST00000506941 SLURP2P0DP57 97 aa21.96■■□□□ 1.11
NPHP4-210ENST00000506941 GRM1Q13255 1194 aa21.96■■□□□ 1.11
NPHP4-210ENST00000506941 MIGA2Q7L4E1 593 aa21.96■■□□□ 1.11
NPHP4-210ENST00000506941 CERS3Q8IU89 383 aa21.96■■□□□ 1.11
NPHP4-210ENST00000506941 CLMNQ96JQ2 1002 aa21.96■■□□□ 1.11
NPHP4-210ENST00000506941 CSRNP1Q96S65 589 aa21.96■■□□□ 1.11
NPHP4-210ENST00000506941 RNF113AO15541 343 aaKnown RBP21.95■■□□□ 1.1
NPHP4-210ENST00000506941 MBD4O95243 580 aa21.95■■□□□ 1.1
NPHP4-210ENST00000506941 IREB2P48200 963 aaKnown RBP21.95■■□□□ 1.1
NPHP4-210ENST00000506941 ZNF157P51786 506 aaPredicted RBP21.95■■□□□ 1.1
NPHP4-210ENST00000506941 RASAL3Q86YV0 1011 aa21.95■■□□□ 1.1
NPHP4-210ENST00000506941 ZSCAN29Q8IWY8 852 aaPredicted RBP21.95■■□□□ 1.1
NPHP4-210ENST00000506941 FSD1Q9BTV5 496 aa21.95■■□□□ 1.1
NPHP4-210ENST00000506941 PUS7LQ9H0K6 701 aaKnown RBP21.95■■□□□ 1.1
NPHP4-210ENST00000506941 ARMT1Q9H993 441 aa21.95■■□□□ 1.1
NPHP4-210ENST00000506941 AOC2O75106 756 aa21.94■■□□□ 1.1
NPHP4-210ENST00000506941 CENPQQ7L2Z9 268 aaPredicted RBP21.94■■□□□ 1.1
NPHP4-210ENST00000506941 JMYQ8N9B5 988 aa21.94■■□□□ 1.1
NPHP4-210ENST00000506941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.94■■□□□ 1.1
NPHP4-210ENST00000506941 HOOK2Q96ED9 719 aa21.94■■□□□ 1.1
NPHP4-210ENST00000506941 SLC10A3P09131 477 aa21.93■■□□□ 1.1
NPHP4-210ENST00000506941 ECE1P42892 770 aa21.93■■□□□ 1.1
NPHP4-210ENST00000506941 DCAF15Q66K64 600 aa21.93■■□□□ 1.1
NPHP4-210ENST00000506941 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.93■■□□□ 1.1
NPHP4-210ENST00000506941 OSBP2Q969R2 916 aa21.93■■□□□ 1.1
NPHP4-210ENST00000506941 EVI5LQ96CN4 794 aa21.93■■□□□ 1.1
NPHP4-210ENST00000506941 SAP30BPQ9UHR5 308 aaKnown RBP21.93■■□□□ 1.1
NPHP4-210ENST00000506941 PTPRFP10586 1907 aa21.92■■□□□ 1.1
NPHP4-210ENST00000506941 ZFYP08048 801 aaPredicted RBP21.92■■□□□ 1.1
NPHP4-210ENST00000506941 USP5P45974 858 aa21.92■■□□□ 1.1
NPHP4-210ENST00000506941 MAP3K10Q02779 954 aa21.92■■□□□ 1.1
NPHP4-210ENST00000506941 APPBP2Q92624 585 aa21.92■■□□□ 1.1
NPHP4-210ENST00000506941 ZIC5Q96T25 663 aa21.92■■□□□ 1.1
NPHP4-210ENST00000506941 ZNF341Q9BYN7 854 aa21.92■■□□□ 1.1
NPHP4-210ENST00000506941 CRNKL1Q9BZJ0 848 aaKnown RBP21.92■■□□□ 1.1
NPHP4-210ENST00000506941 PALD1Q9ULE6 856 aa21.92■■□□□ 1.1
NPHP4-210ENST00000506941 M0R2C6 588 aa21.91■■□□□ 1.1
NPHP4-210ENST00000506941 PRKAB2O43741 272 aa21.91■■□□□ 1.1
NPHP4-210ENST00000506941 VGLL4Q14135 290 aa21.91■■□□□ 1.1
NPHP4-210ENST00000506941 ANKRD13AQ8IZ07 590 aa21.91■■□□□ 1.1
NPHP4-210ENST00000506941 SDR42E1Q8WUS8 393 aa21.91■■□□□ 1.1
NPHP4-210ENST00000506941 CCDC136Q96JN2 1154 aa21.91■■□□□ 1.1
NPHP4-210ENST00000506941 WRNIP1Q96S55 665 aa21.91■■□□□ 1.1
NPHP4-210ENST00000506941 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.91■■□□□ 1.1
NPHP4-210ENST00000506941 ZNF112Q9UJU3 913 aa21.91■■□□□ 1.1
NPHP4-210ENST00000506941 UNCXA6NJT0 531 aa21.9■■□□□ 1.1
NPHP4-210ENST00000506941 FAM196BA6NMK8 535 aa21.9■■□□□ 1.1
NPHP4-210ENST00000506941 TRIM6-TRIM34B2RNG4 842 aa21.9■■□□□ 1.1
NPHP4-210ENST00000506941 MAP3K9P80192 1104 aa21.9■■□□□ 1.1
NPHP4-210ENST00000506941 SLC4A8Q2Y0W8 1093 aa21.9■■□□□ 1.1
NPHP4-210ENST00000506941 ZMYM1Q5SVZ6 1142 aa21.9■■□□□ 1.1
NPHP4-210ENST00000506941 ZKSCAN4Q969J2 545 aaPredicted RBP21.9■■□□□ 1.1
NPHP4-210ENST00000506941 CCDC102AQ96A19 550 aa21.9■■□□□ 1.1
NPHP4-210ENST00000506941 AIDAQ96BJ3 306 aa21.9■■□□□ 1.1
NPHP4-210ENST00000506941 SEC62Q99442 399 aaKnown RBP21.9■■□□□ 1.1
NPHP4-210ENST00000506941 PHF20L1A8MW92 1017 aa21.89■■□□□ 1.09
NPHP4-210ENST00000506941 INPP5BP32019 993 aa21.89■■□□□ 1.09
NPHP4-210ENST00000506941 LRRFIP1Q32MZ4 808 aaKnown RBP21.89■■□□□ 1.09
NPHP4-210ENST00000506941 SKAP1Q86WV1 359 aa21.89■■□□□ 1.09
NPHP4-210ENST00000506941 DHX36Q9H2U1 1008 aaKnown RBP21.89■■□□□ 1.09
NPHP4-210ENST00000506941 ELP3Q9H9T3 547 aa21.89■■□□□ 1.09
NPHP4-210ENST00000506941 DCP1AQ9NPI6 582 aaPredicted RBP21.89■■□□□ 1.09
NPHP4-210ENST00000506941 SNCAIPQ9Y6H5 919 aa21.89■■□□□ 1.09
NPHP4-210ENST00000506941 GSPT1P15170 499 aaKnown RBP21.88■■□□□ 1.09
NPHP4-210ENST00000506941 NOGQ13253 232 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms