RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 HNRNPUQ00839 825 aaKnown RBP eCLIP30.44■■■□□ 2.46
HERC4-212ENST00000505760 SLC9C1Q4G0N8 1177 aa30.44■■■□□ 2.46
HERC4-212ENST00000505760 NBPF11Q86T75 865 aa30.44■■■□□ 2.46
HERC4-212ENST00000505760 PDHXO00330 501 aa30.43■■■□□ 2.46
HERC4-212ENST00000505760 SLC34A2O95436 690 aa30.43■■■□□ 2.46
HERC4-212ENST00000505760 PI16Q6UXB8 463 aa30.43■■■□□ 2.46
HERC4-212ENST00000505760 ARHGAP39Q9C0H5 1083 aa30.43■■■□□ 2.46
HERC4-212ENST00000505760 PICK1Q9NRD5 415 aa30.43■■■□□ 2.46
HERC4-212ENST00000505760 ZSWIM8A7E2V4 1837 aa30.43■■■□□ 2.46
HERC4-212ENST00000505760 PHF20L1A8MW92 1017 aa30.42■■■□□ 2.46
HERC4-212ENST00000505760 SH3BP5LQ7L8J4 393 aa30.42■■■□□ 2.46
HERC4-212ENST00000505760 DDX4Q9NQI0 724 aaKnown RBP30.42■■■□□ 2.46
HERC4-212ENST00000505760 GPR75-ASB3A0A0A6YYF3 556 aa30.41■■■□□ 2.46
HERC4-212ENST00000505760 ARID4AP29374 1257 aaPredicted RBP30.41■■■□□ 2.46
HERC4-212ENST00000505760 GSTO1P78417 241 aa30.41■■■□□ 2.46
HERC4-212ENST00000505760 TBC1D9Q6ZT07 1266 aa30.41■■■□□ 2.46
HERC4-212ENST00000505760 SCYL3Q8IZE3 742 aa30.41■■■□□ 2.46
HERC4-212ENST00000505760 CPA4Q9UI42 421 aa30.41■■■□□ 2.46
HERC4-212ENST00000505760 DDTLA6NHG4 134 aaPredicted RBP30.4■■■□□ 2.46
HERC4-212ENST00000505760 CXCL11O14625 94 aa30.4■■■□□ 2.46
HERC4-212ENST00000505760 GNRH1P01148 92 aa30.4■■■□□ 2.46
HERC4-212ENST00000505760 LDHCP07864 332 aa30.4■■■□□ 2.46
HERC4-212ENST00000505760 C17orf99Q6UX52 265 aa30.4■■■□□ 2.46
HERC4-212ENST00000505760 ZNF333Q96JL9 665 aa30.4■■■□□ 2.46
HERC4-212ENST00000505760 TMEM106CQ9BVX2 250 aa30.4■■■□□ 2.46
HERC4-212ENST00000505760 RAI14Q9P0K7 980 aa30.4■■■□□ 2.46
HERC4-212ENST00000505760 ZHX2Q9Y6X8 837 aa30.4■■■□□ 2.46
HERC4-212ENST00000505760 OS9Q13438 667 aaPredicted RBP30.39■■■□□ 2.46
HERC4-212ENST00000505760 FTSJ3Q8IY81 847 aaKnown RBP30.39■■■□□ 2.46
HERC4-212ENST00000505760 ZNF384Q8TF68 577 aa30.39■■■□□ 2.46
HERC4-212ENST00000505760 ECM2O94769 699 aaPredicted RBP30.38■■■□□ 2.45
HERC4-212ENST00000505760 UQCRFS1P1P0C7P4 283 aa30.38■■■□□ 2.45
HERC4-212ENST00000505760 MAP3K10Q02779 954 aa30.38■■■□□ 2.45
HERC4-212ENST00000505760 MOGSQ13724 837 aa30.38■■■□□ 2.45
HERC4-212ENST00000505760 NSUN4Q96CB9 384 aaKnown RBP30.38■■■□□ 2.45
HERC4-212ENST00000505760 PTPRAP18433 802 aa30.37■■■□□ 2.45
HERC4-212ENST00000505760 MCAMP43121 646 aa30.37■■■□□ 2.45
HERC4-212ENST00000505760 RHBDL3P58872 404 aa30.37■■■□□ 2.45
HERC4-212ENST00000505760 MIER1Q8N108 512 aa30.37■■■□□ 2.45
HERC4-212ENST00000505760 PARK7Q99497 189 aaKnown RBP30.37■■■□□ 2.45
HERC4-212ENST00000505760 LRP2BPQ9P2M1 347 aa30.37■■■□□ 2.45
HERC4-212ENST00000505760 DOCK1Q14185 1865 aa30.37■■■□□ 2.45
HERC4-212ENST00000505760 CTNND1O60716 968 aaKnown RBP30.36■■■□□ 2.45
HERC4-212ENST00000505760 EN2P19622 333 aaPredicted RBP30.36■■■□□ 2.45
HERC4-212ENST00000505760 POLA2Q14181 598 aa30.36■■■□□ 2.45
HERC4-212ENST00000505760 FASTKD5Q7L8L6 764 aaKnown RBP30.36■■■□□ 2.45
HERC4-212ENST00000505760 NPM3O75607 178 aaKnown RBP30.35■■■□□ 2.45
HERC4-212ENST00000505760 MAP4K4O95819 1239 aaPredicted RBP30.35■■■□□ 2.45
HERC4-212ENST00000505760 PRMT2P55345 433 aa30.35■■■□□ 2.45
HERC4-212ENST00000505760 SSH3Q8TE77 659 aa30.35■■■□□ 2.45
HERC4-212ENST00000505760 ADGRA2Q96PE1 1338 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 A0A0G2JLL6 359 aaPredicted RBP30.34■■■□□ 2.45
HERC4-212ENST00000505760 SLURP2P0DP57 97 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 PSMC4P43686 418 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 ATP8B2P98198 1209 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 SLC4A8Q2Y0W8 1093 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 TTC39AQ5SRH9 613 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 GPAT2Q6NUI2 795 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 PRRT2Q7Z6L0 340 aaPredicted RBP30.34■■■□□ 2.45
HERC4-212ENST00000505760 ITPRIPQ8IWB1 547 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 C1orf115Q9H7X2 142 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 GPR108Q9NPR9 543 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 AFG3L2Q9Y4W6 797 aa30.34■■■□□ 2.45
HERC4-212ENST00000505760 SURF6O75683 361 aaKnown RBP30.33■■■□□ 2.45
HERC4-212ENST00000505760 MYCP01106 439 aaPredicted RBP30.33■■■□□ 2.45
HERC4-212ENST00000505760 TNNI3KQ59H18 835 aa30.33■■■□□ 2.45
HERC4-212ENST00000505760 CCDC158Q5M9N0 1113 aa30.33■■■□□ 2.45
HERC4-212ENST00000505760 GADL1Q6ZQY3 521 aa30.33■■■□□ 2.45
HERC4-212ENST00000505760 SH3TC2Q8TF17 1288 aa30.33■■■□□ 2.45
HERC4-212ENST00000505760 NOL10Q9BSC4 688 aaKnown RBP30.33■■■□□ 2.45
HERC4-212ENST00000505760 FPGT-TNNI3KV9GXZ4 949 aa30.33■■■□□ 2.45
HERC4-212ENST00000505760 PTPRFP10586 1907 aa30.32■■■□□ 2.44
HERC4-212ENST00000505760 FMNL1O95466 1100 aaPredicted RBP30.32■■■□□ 2.44
HERC4-212ENST00000505760 CYP2C8P10632 490 aa30.32■■■□□ 2.44
HERC4-212ENST00000505760 TRIM47Q96LD4 638 aa30.32■■■□□ 2.44
HERC4-212ENST00000505760 SNRKQ9NRH2 765 aa30.32■■■□□ 2.44
HERC4-212ENST00000505760 PHIPQ8WWQ0 1821 aa30.31■■■□□ 2.44
HERC4-212ENST00000505760 TBC1D12O60347 775 aa30.31■■■□□ 2.44
HERC4-212ENST00000505760 HOXD10P28358 340 aa30.31■■■□□ 2.44
HERC4-212ENST00000505760 DIEXFQ68CQ4 756 aaKnown RBP30.31■■■□□ 2.44
HERC4-212ENST00000505760 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.31■■■□□ 2.44
HERC4-212ENST00000505760 SRRDQ9UH36 339 aa30.31■■■□□ 2.44
HERC4-212ENST00000505760 CTGFP29279 349 aa30.3■■■□□ 2.44
HERC4-212ENST00000505760 TEX11Q8IYF3 940 aa30.3■■■□□ 2.44
HERC4-212ENST00000505760 DBNDD2Q9BQY9 259 aa30.3■■■□□ 2.44
HERC4-212ENST00000505760 OSBPL5Q9H0X9 879 aaPredicted RBP30.3■■■□□ 2.44
HERC4-212ENST00000505760 TRIM75PA6NK02 468 aa30.29■■■□□ 2.44
HERC4-212ENST00000505760 FAM196BA6NMK8 535 aa30.29■■■□□ 2.44
HERC4-212ENST00000505760 NAA16Q6N069 864 aaPredicted RBP30.29■■■□□ 2.44
HERC4-212ENST00000505760 COL2A1P02458 1487 aaPredicted RBP30.29■■■□□ 2.44
HERC4-212ENST00000505760 MAST2Q6P0Q8 1798 aa30.28■■■□□ 2.44
HERC4-212ENST00000505760 BCRP11274 1271 aa30.28■■■□□ 2.44
HERC4-212ENST00000505760 RLBP1P12271 317 aa30.28■■■□□ 2.44
HERC4-212ENST00000505760 OSBPP22059 807 aa30.28■■■□□ 2.44
HERC4-212ENST00000505760 RAET1EQ8TD07 263 aa30.28■■■□□ 2.44
HERC4-212ENST00000505760 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.28■■■□□ 2.44
HERC4-212ENST00000505760 MGAMO43451 1857 aa30.27■■■□□ 2.44
HERC4-212ENST00000505760 ZBTB7BO15156 539 aaPredicted RBP30.27■■■□□ 2.44
HERC4-212ENST00000505760 BAG3O95817 575 aa30.27■■■□□ 2.44
HERC4-212ENST00000505760 SH3RF3Q8TEJ3 882 aaPredicted RBP30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms