RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 AATFQ9NY61 560 aaKnown RBP eCLIP10.58□□□□□ -0.72
CTSB-205ENST00000505496 STAP2Q9UGK3 403 aa10.58□□□□□ -0.72
CTSB-205ENST00000505496 MYH2Q9UKX2 1941 aa10.58□□□□□ -0.72
CTSB-205ENST00000505496 MAST2Q6P0Q8 1798 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 DDTLA6NHG4 134 aaPredicted RBP10.57□□□□□ -0.72
CTSB-205ENST00000505496 ZBTB48P10074 688 aaPredicted RBP10.57□□□□□ -0.72
CTSB-205ENST00000505496 MX1P20591 662 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 ADD2P35612 726 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 MAP3K9P80192 1104 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 NUCB1Q02818 461 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 UBE3CQ15386 1083 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 SPRYD7Q5W111 196 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 TSHZ3Q63HK5 1081 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 METTL16Q86W50 562 aaKnown RBP10.57□□□□□ -0.72
CTSB-205ENST00000505496 TEX11Q8IYF3 940 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 REM2Q8IYK8 340 aaPredicted RBP10.57□□□□□ -0.72
CTSB-205ENST00000505496 CLMNQ96JQ2 1002 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 CSRNP1Q96S65 589 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 NOL10Q9BSC4 688 aaKnown RBP10.57□□□□□ -0.72
CTSB-205ENST00000505496 ZNF532Q9HCE3 1301 aa10.57□□□□□ -0.72
CTSB-205ENST00000505496 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 PHF20L1A8MW92 1017 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 ERC2O15083 957 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 TBC1D12O60347 775 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 GLRX3O76003 335 aaKnown RBP10.56□□□□□ -0.72
CTSB-205ENST00000505496 HSPA1AP0DMV8 641 aaKnown RBP10.56□□□□□ -0.72
CTSB-205ENST00000505496 HSPA1BP0DMV9 641 aaKnown RBP10.56□□□□□ -0.72
CTSB-205ENST00000505496 DYNLL1P63167 89 aaKnown RBP10.56□□□□□ -0.72
CTSB-205ENST00000505496 IRX6P78412 446 aaPredicted RBP10.56□□□□□ -0.72
CTSB-205ENST00000505496 KIF23Q02241 960 aaPredicted RBP10.56□□□□□ -0.72
CTSB-205ENST00000505496 GRM1Q13255 1194 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 PICALMQ13492 652 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 VGLL4Q14135 290 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 MIGA2Q7L4E1 593 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 KBTBD3Q8NAB2 608 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 MIGA1Q8NAN2 632 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 SLC10A4Q96EP9 437 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 ZNF341Q9BYN7 854 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.56□□□□□ -0.725e-7■□□□□ 10.3
CTSB-205ENST00000505496 BCL11AQ9H165 835 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 FLT1P17948 1338 aa10.56□□□□□ -0.72
CTSB-205ENST00000505496 CA12O43570 354 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 GJA5P36382 358 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 TM4SF4P48230 202 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 PDE1AP54750 535 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 NOL9Q5SY16 702 aaKnown RBP10.55□□□□□ -0.72
CTSB-205ENST00000505496 CHD1LQ86WJ1 897 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 TGFBRAP1Q8WUH2 860 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 WNK4Q96J92 1243 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 WRNIP1Q96S55 665 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 DHX36Q9H2U1 1008 aaKnown RBP10.55□□□□□ -0.72
CTSB-205ENST00000505496 OSBPL3Q9H4L5 887 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 SNCAIPQ9Y6H5 919 aa10.55□□□□□ -0.72
CTSB-205ENST00000505496 MAGEB6P1A0A0J9YX57 407 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 SPDYE5A6NIY4 337 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 FOXN1O15353 648 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 CHGBP05060 677 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 ZSCAN25Q6NSZ9 544 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 TICAM2Q86XR7 235 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 ZKSCAN4Q969J2 545 aaPredicted RBP10.54□□□□□ -0.72
CTSB-205ENST00000505496 LNPKQ9C0E8 428 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 SAGE1Q9NXZ1 904 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 PI4KBQ9UBF8 816 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 ZBTB47Q9UFB7 747 aaPredicted RBP10.54□□□□□ -0.72
CTSB-205ENST00000505496 CSADQ9Y600 493 aa10.54□□□□□ -0.72
CTSB-205ENST00000505496 MYO5AQ9Y4I1 1855 aaKnown RBP10.53□□□□□ -0.72
CTSB-205ENST00000505496 TESPA1A2RU30 521 aaPredicted RBP10.53□□□□□ -0.72
CTSB-205ENST00000505496 MANSC4A6NHS7 340 aaPredicted RBP10.53□□□□□ -0.72
CTSB-205ENST00000505496 ZFYP08048 801 aaPredicted RBP10.53□□□□□ -0.72
CTSB-205ENST00000505496 INPP5BP32019 993 aa10.53□□□□□ -0.72
CTSB-205ENST00000505496 INHBEP58166 350 aa10.53□□□□□ -0.72
CTSB-205ENST00000505496 SLFNL1Q499Z3 407 aa10.53□□□□□ -0.72
CTSB-205ENST00000505496 ERO1BQ86YB8 467 aa10.53□□□□□ -0.72
CTSB-205ENST00000505496 MAPKAPK5Q8IW41 473 aa10.53□□□□□ -0.72
CTSB-205ENST00000505496 PLEKHM2Q8IWE5 1019 aa10.53□□□□□ -0.72
CTSB-205ENST00000505496 ZSCAN29Q8IWY8 852 aaPredicted RBP10.53□□□□□ -0.72
CTSB-205ENST00000505496 OPTNQ96CV9 577 aa10.53□□□□□ -0.72
CTSB-205ENST00000505496 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
CTSB-205ENST00000505496 ELP3Q9H9T3 547 aa10.53□□□□□ -0.72
CTSB-205ENST00000505496 HERC5Q9UII4 1024 aaKnown RBP10.53□□□□□ -0.72
CTSB-205ENST00000505496 RNF113AO15541 343 aaKnown RBP10.52□□□□□ -0.73
CTSB-205ENST00000505496 CTNND1O60716 968 aaKnown RBP10.52□□□□□ -0.73
CTSB-205ENST00000505496 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 CTCFP49711 727 aaPredicted RBP10.52□□□□□ -0.73
CTSB-205ENST00000505496 PPATQ06203 517 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 SREBF2Q12772 1141 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 B4GALNT3Q6L9W6 998 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 FOXP4Q8IVH2 680 aaPredicted RBP10.52□□□□□ -0.73
CTSB-205ENST00000505496 LCORLQ8N3X6 602 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 CNKSR2Q8WXI2 1034 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 OSBP2Q969R2 916 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 AIDAQ96BJ3 306 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 CRNKL1Q9BZJ0 848 aaKnown RBP10.52□□□□□ -0.73
CTSB-205ENST00000505496 PUS7LQ9H0K6 701 aaKnown RBP10.52□□□□□ -0.73
CTSB-205ENST00000505496 EHD4Q9H223 541 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 DNAJC18Q9H819 358 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 DCP1AQ9NPI6 582 aaPredicted RBP10.52□□□□□ -0.73
CTSB-205ENST00000505496 PALD1Q9ULE6 856 aa10.52□□□□□ -0.73
CTSB-205ENST00000505496 KCNH4Q9UQ05 1017 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms