RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 STYK1Q6J9G0 422 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 C7orf43Q8WVR3 580 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 PNNQ9H307 717 aaKnown RBP6.34□□□□□ -1.39
CDH9-203ENST00000505045 MBIPQ9NS73 344 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 CHPF2Q9P2E5 772 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 HRH3Q9Y5N1 445 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 IBTKQ9P2D0 1353 aaPredicted RBP6.34□□□□□ -1.39
CDH9-203ENST00000505045 LTBP1Q14766 1721 aa6.34□□□□□ -1.39
CDH9-203ENST00000505045 ERVV-1B6SEH8 477 aa6.34□□□□□ -1.4
CDH9-203ENST00000505045 HTRA3P83110 453 aa6.34□□□□□ -1.4
CDH9-203ENST00000505045 CRY2Q49AN0 593 aa6.34□□□□□ -1.4
CDH9-203ENST00000505045 KIF6Q6ZMV9 814 aa6.34□□□□□ -1.4
CDH9-203ENST00000505045 ZNF34Q8IZ26 560 aa6.34□□□□□ -1.4
CDH9-203ENST00000505045 SYNE4Q8N205 404 aa6.34□□□□□ -1.4
CDH9-203ENST00000505045 XAGE3Q8WTP9 111 aa6.34□□□□□ -1.4
CDH9-203ENST00000505045 MASTLQ96GX5 879 aa6.34□□□□□ -1.4
CDH9-203ENST00000505045 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.4
CDH9-203ENST00000505045 CUEDC1Q9NWM3 386 aaPredicted RBP6.34□□□□□ -1.4
CDH9-203ENST00000505045 SPATA31C2B4DYI2 1134 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 FURINP09958 794 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 ZNF853P0CG23 659 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 HSPA6P17066 643 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 VAC14Q08AM6 782 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 AIMP1Q12904 312 aaKnown RBP6.33□□□□□ -1.4
CDH9-203ENST00000505045 COPS6Q7L5N1 327 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 VWA5B2Q8N398 1253 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 TAOK3Q9H2K8 898 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 ADAMTSL1Q8N6G6 1762 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 ZNF541Q9H0D2 1346 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 LTBP3Q9NS15 1303 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 SPEF2Q9C093 1822 aa6.33□□□□□ -1.4
CDH9-203ENST00000505045 MEN1O00255 615 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 NPR1P16066 1061 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 RHOQP17081 205 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 WASHC4Q2M389 1173 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 RNFT1Q5M7Z0 435 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 HDGFL1Q5TGJ6 251 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 TPTE2Q6XPS3 522 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 PRICKLE2Q7Z3G6 844 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 CNKSR1Q969H4 720 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 COL25A1Q9BXS0 654 aaPredicted RBP6.32□□□□□ -1.4
CDH9-203ENST00000505045 RRAGCQ9HB90 399 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 ARHGEF10LQ9HCE6 1279 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 BABAM1Q9NWV8 329 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 COG6Q9Y2V7 657 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 SCN4AP35499 1836 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 GLTPD2A6NH11 291 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 TOMM70O94826 608 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 GNRH1P01148 92 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 IL2RAP01589 272 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 ABL2P42684 1182 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 DUSP27Q5VZP5 1158 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 SV2AQ7L0J3 742 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 TSPYL6Q8N831 410 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 TSR2Q969E8 191 aaKnown RBP6.32□□□□□ -1.4
CDH9-203ENST00000505045 XAGE2Q96GT9 111 aa6.32□□□□□ -1.4
CDH9-203ENST00000505045 DDX21Q9NR30 783 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDH9-203ENST00000505045 ZNF277Q9NRM2 450 aaPredicted RBP6.32□□□□□ -1.4
CDH9-203ENST00000505045 KDM2BQ8NHM5 1336 aa6.31□□□□□ -1.4
CDH9-203ENST00000505045 MYH3P11055 1940 aa6.31□□□□□ -1.4
CDH9-203ENST00000505045 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
CDH9-203ENST00000505045 SLURP2P0DP57 97 aa6.31□□□□□ -1.4
CDH9-203ENST00000505045 HCLS1P14317 486 aaPredicted RBP6.31□□□□□ -1.4
CDH9-203ENST00000505045 GTF2E1P29083 439 aaPredicted RBP6.31□□□□□ -1.4
CDH9-203ENST00000505045 CCDC93Q567U6 631 aa6.31□□□□□ -1.4
CDH9-203ENST00000505045 NLRP10Q86W26 655 aa6.31□□□□□ -1.4
CDH9-203ENST00000505045 C8orf58Q8NAV2 365 aa6.31□□□□□ -1.4
CDH9-203ENST00000505045 NYXQ9GZU5 481 aa6.31□□□□□ -1.4
CDH9-203ENST00000505045 ABCC4O15439 1325 aa6.31□□□□□ -1.4
CDH9-203ENST00000505045 TCERG1O14776 1098 aaKnown RBP6.3□□□□□ -1.4
CDH9-203ENST00000505045 DDNO94850 711 aaPredicted RBP6.3□□□□□ -1.4
CDH9-203ENST00000505045 FKBP4Q02790 459 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH9-203ENST00000505045 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
CDH9-203ENST00000505045 ESYT1Q9BSJ8 1104 aa6.3□□□□□ -1.4
CDH9-203ENST00000505045 PHAXQ9H814 394 aaKnown RBP6.3□□□□□ -1.4
CDH9-203ENST00000505045 IFT57Q9NWB7 429 aa6.3□□□□□ -1.4
CDH9-203ENST00000505045 SCN9AQ15858 1988 aa6.3□□□□□ -1.4
CDH9-203ENST00000505045 HOXB7P09629 217 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 HOXA10P31260 410 aaPredicted RBP6.29□□□□□ -1.4
CDH9-203ENST00000505045 SOX11P35716 441 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 POU4F2Q12837 409 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 TCIRG1Q13488 830 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 RPGRQ92834 1020 aaKnown RBP6.29□□□□□ -1.4
CDH9-203ENST00000505045 NLRP3Q96P20 1036 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 UTP14AQ9BVJ6 771 aaKnown RBP6.29□□□□□ -1.4
CDH9-203ENST00000505045 MRS2Q9HD23 443 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 DYRK1BQ9Y463 629 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 A0A1B0GUL6 1792 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 ZEB1P37275 1124 aaPredicted RBP6.29□□□□□ -1.4
CDH9-203ENST00000505045 CENPCQ03188 943 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 GAS6Q14393 721 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 SLFNL1Q499Z3 407 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 PARP10Q53GL7 1025 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 RNF135Q8IUD6 432 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 WWC1Q8IX03 1113 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 TRIM22Q8IYM9 498 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 ZNF837Q96EG3 531 aaPredicted RBP6.29□□□□□ -1.4
CDH9-203ENST00000505045 GMCL1Q96IK5 515 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 ISCA1Q9BUE6 129 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 RAB6BQ9NRW1 208 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms