RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TLR2O60603 784 aa16.3■□□□□ 0.2
DDX41-204ENST00000504807 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
DDX41-204ENST00000504807 GNRH1P01148 92 aa16.3■□□□□ 0.2
DDX41-204ENST00000504807 GNAI2P04899 355 aa16.3■□□□□ 0.2
DDX41-204ENST00000504807 GTF2A2P52657 109 aa16.3■□□□□ 0.2
DDX41-204ENST00000504807 PRMT2P55345 433 aa16.3■□□□□ 0.2
DDX41-204ENST00000504807 TCP10Q12799 353 aa16.3■□□□□ 0.2
DDX41-204ENST00000504807 MIGA2Q7L4E1 593 aa16.3■□□□□ 0.2
DDX41-204ENST00000504807 FAM83AQ86UY5 434 aa16.3■□□□□ 0.2
DDX41-204ENST00000504807 RAET1EQ8TD07 263 aa16.3■□□□□ 0.2
DDX41-204ENST00000504807 U2AF1L4Q8WU68 220 aaKnown RBP16.3■□□□□ 0.2
DDX41-204ENST00000504807 ATRNL1Q5VV63 1379 aa16.29■□□□□ 0.2
DDX41-204ENST00000504807 RPAP1Q9BWH6 1393 aaPredicted RBP16.29■□□□□ 0.2
DDX41-204ENST00000504807 MAST3O60307 1309 aa16.29■□□□□ 0.2
DDX41-204ENST00000504807 ZBTB22O15209 634 aa16.29■□□□□ 0.2
DDX41-204ENST00000504807 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
DDX41-204ENST00000504807 POLA2Q14181 598 aa16.29■□□□□ 0.2
DDX41-204ENST00000504807 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
DDX41-204ENST00000504807 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
DDX41-204ENST00000504807 GAKO14976 1311 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 SEMA3EO15041 775 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 LDHBP07195 334 aaKnown RBP16.28■□□□□ 0.2
DDX41-204ENST00000504807 CTGFP29279 349 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 INPP5BP32019 993 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 TNNI2P48788 182 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 MAP3K9P80192 1104 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 FKBP1CQ5VVH2 108 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 SH3BP5LQ7L8J4 393 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 WRNIP1Q96S55 665 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
DDX41-204ENST00000504807 HMG20BQ9P0W2 317 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 DENND2AQ9ULE3 1009 aa16.28■□□□□ 0.2
DDX41-204ENST00000504807 SPDYE5A6NIY4 337 aa16.27■□□□□ 0.2
DDX41-204ENST00000504807 PSMC4P43686 418 aa16.27■□□□□ 0.2
DDX41-204ENST00000504807 TBC1D9Q6ZT07 1266 aa16.27■□□□□ 0.2
DDX41-204ENST00000504807 FAM151AQ8WW52 585 aa16.27■□□□□ 0.2
DDX41-204ENST00000504807 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
DDX41-204ENST00000504807 GDF15Q99988 308 aa16.27■□□□□ 0.2
DDX41-204ENST00000504807 USP40Q9NVE5 1235 aa16.27■□□□□ 0.2
DDX41-204ENST00000504807 ZBED9Q6R2W3 1325 aa16.26■□□□□ 0.19
DDX41-204ENST00000504807 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
DDX41-204ENST00000504807 OSBPP22059 807 aa16.26■□□□□ 0.19
DDX41-204ENST00000504807 UBXN2AP68543 259 aa16.26■□□□□ 0.19
DDX41-204ENST00000504807 SSH3Q8TE77 659 aa16.26■□□□□ 0.19
DDX41-204ENST00000504807 NEUROD6Q96NK8 337 aa16.26■□□□□ 0.19
DDX41-204ENST00000504807 UNC93B1Q9H1C4 597 aa16.26■□□□□ 0.19
DDX41-204ENST00000504807 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
DDX41-204ENST00000504807 ZMYND8Q9ULU4 1186 aaPredicted RBP16.26■□□□□ 0.19
DDX41-204ENST00000504807 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
DDX41-204ENST00000504807 MYH2Q9UKX2 1941 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 PDS5AQ29RF7 1337 aaKnown RBP16.25■□□□□ 0.19
DDX41-204ENST00000504807 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 BMP8BP34820 402 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 MCAMP43121 646 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 MECOMQ03112 1051 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 LRIT3Q3SXY7 679 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 PANK1Q8TE04 598 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 TLR7Q9NYK1 1049 aaKnown RBP16.25■□□□□ 0.19
DDX41-204ENST00000504807 TMOD2Q9NZR1 351 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 ABCF2Q9UG63 623 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 CPA4Q9UI42 421 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 ZNF112Q9UJU3 913 aa16.25■□□□□ 0.19
DDX41-204ENST00000504807 IRF6O14896 467 aa16.24■□□□□ 0.19
DDX41-204ENST00000504807 SGPL1O95470 568 aa16.24■□□□□ 0.19
DDX41-204ENST00000504807 TFRCP02786 760 aaKnown RBP16.24■□□□□ 0.19
DDX41-204ENST00000504807 COL9A1P20849 921 aa16.24■□□□□ 0.19
DDX41-204ENST00000504807 HOXD10P28358 340 aa16.24■□□□□ 0.19
DDX41-204ENST00000504807 ARID4AP29374 1257 aaPredicted RBP16.24■□□□□ 0.19
DDX41-204ENST00000504807 RGS3P49796 1198 aa16.24■□□□□ 0.19
DDX41-204ENST00000504807 RHBDL3P58872 404 aa16.24■□□□□ 0.19
DDX41-204ENST00000504807 ATP8B2P98198 1209 aa16.24■□□□□ 0.19
DDX41-204ENST00000504807 C7orf61Q8IZ16 206 aa16.24■□□□□ 0.19
DDX41-204ENST00000504807 DBNDD2Q9BQY9 259 aa16.24■□□□□ 0.19
DDX41-204ENST00000504807 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
DDX41-204ENST00000504807 RPTORQ8N122 1335 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 TTC28Q96AY4 2481 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
DDX41-204ENST00000504807 CETPP11597 493 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 BTDP43251 543 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 MOGSQ13724 837 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 MVPQ14764 893 aaKnown RBP16.23■□□□□ 0.19
DDX41-204ENST00000504807 ITPRIPQ8IWB1 547 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 SPATA5Q8NB90 893 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 IDI2Q9BXS1 227 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 AKAP2Q9Y2D5 859 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 CSADQ9Y600 493 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 DOCK2Q92608 1830 aa16.23■□□□□ 0.19
DDX41-204ENST00000504807 MROH7-TTC4A0A0A0MT08 1334 aa16.22■□□□□ 0.19
DDX41-204ENST00000504807 PHF20L1A8MW92 1017 aa16.22■□□□□ 0.19
DDX41-204ENST00000504807 PRKCZQ05513 592 aa16.22■□□□□ 0.19
DDX41-204ENST00000504807 TNNI3KQ59H18 835 aa16.22■□□□□ 0.19
DDX41-204ENST00000504807 C17orf99Q6UX52 265 aa16.22■□□□□ 0.19
DDX41-204ENST00000504807 ERO1BQ86YB8 467 aa16.22■□□□□ 0.19
DDX41-204ENST00000504807 TDHQ8IZJ6 230 aa16.22■□□□□ 0.19
DDX41-204ENST00000504807 NSUN4Q96CB9 384 aaKnown RBP16.22■□□□□ 0.19
DDX41-204ENST00000504807 FAM163AQ96GL9 167 aaPredicted RBP16.22■□□□□ 0.19
DDX41-204ENST00000504807 ZNF341Q9BYN7 854 aa16.22■□□□□ 0.19
DDX41-204ENST00000504807 SNRKQ9NRH2 765 aa16.22■□□□□ 0.19
DDX41-204ENST00000504807 FPGT-TNNI3KV9GXZ4 949 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms