RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 C1orf167Q5SNV9 1468 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 AFDNP55196 1824 aaKnown RBP10.44□□□□□ -0.74
FN1-227ENST00000498719 PRMT3O60678 531 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 MAP3K9P80192 1104 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 RASSF7Q02833 373 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 STK3Q13188 491 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 ANKRD13DQ6ZTN6 518 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 CDC37L1Q7L3B6 337 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 ZNF830Q96NB3 372 aaPredicted RBP10.44□□□□□ -0.74
FN1-227ENST00000498719 C12orf49Q9H741 205 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 DBNLQ9UJU6 430 aaKnown RBP10.44□□□□□ -0.74
FN1-227ENST00000498719 CHMP3Q9Y3E7 222 aa10.44□□□□□ -0.74
FN1-227ENST00000498719 R3HCC1Q9Y3T6 440 aaKnown RBP10.44□□□□□ -0.74
FN1-227ENST00000498719 COL15A1P39059 1388 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 CYP27B1O15528 508 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 TFCP2Q12800 502 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 SERINC3Q13530 473 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 CCSAPQ6IQ19 270 aaPredicted RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 FAM200AQ8TCP9 573 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 MED23Q9ULK4 1368 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 NUTM2BA6NNL0 878 aaPredicted RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 NUTM2EB1AL46 878 aaPredicted RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 RGS20O76081 388 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 FOSP01100 380 aaPredicted RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 TATP17735 454 aaPredicted RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 PTPN12Q05209 780 aaKnown RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 POU5F1BQ06416 359 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 LARP1BQ659C4 914 aaKnown RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 CCDC129Q6ZRS4 1044 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 IFNL1Q8IU54 200 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 NUTM2AQ8IVF1 878 aaPredicted RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 ZSCAN31Q96LW9 406 aaPredicted RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 SEC62Q99442 399 aaKnown RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 DUSP9Q99956 384 aaKnown RBP10.43□□□□□ -0.74
FN1-227ENST00000498719 CCDC39Q9UFE4 941 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 EGFL7Q9UHF1 273 aa10.43□□□□□ -0.74
FN1-227ENST00000498719 ALS2Q96Q42 1657 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 RFX5P48382 616 aaPredicted RBP10.42□□□□□ -0.74
FN1-227ENST00000498719 TOB2Q14106 344 aaPredicted RBP10.42□□□□□ -0.74
FN1-227ENST00000498719 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
FN1-227ENST00000498719 FRMD6Q96NE9 622 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 TSPAN18Q96SJ8 248 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 FAM126AQ9BYI3 521 aaPredicted RBP10.42□□□□□ -0.74
FN1-227ENST00000498719 TYW1Q9NV66 732 aaKnown RBP10.42□□□□□ -0.74
FN1-227ENST00000498719 ATP6V1DQ9Y5K8 247 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.42□□□□□ -0.744e-7■■■■□ 24.1
FN1-227ENST00000498719 HIP1O00291 1037 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 BPNT1O95861 308 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 PTGER2P43116 358 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 TTC5Q8N0Z6 440 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 INTUQ9ULD6 942 aa10.42□□□□□ -0.74
FN1-227ENST00000498719 TAF5LO75529 589 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 RPS6KB1P23443 525 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 SOX11P35716 441 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 TERF1P54274 439 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 HSP90AA2PQ14568 343 aaPredicted RBP10.41□□□□□ -0.74
FN1-227ENST00000498719 TNNI3KQ59H18 835 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 TTC6Q86TZ1 520 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 IFNL2Q8IZJ0 200 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 SETDB2Q96T68 719 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 DBNDD2Q9BQY9 259 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 C19orf44Q9H6X5 657 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 ARNT2Q9HBZ2 717 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 FPGT-TNNI3KV9GXZ4 949 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 A0A087WZG4 1122 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 TTC36A6NLP5 189 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 ADCY5O95622 1261 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 SNRPA1P09661 255 aaKnown RBP10.41□□□□□ -0.74
FN1-227ENST00000498719 PSMA5P28066 241 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 SIM2Q14190 667 aaPredicted RBP10.41□□□□□ -0.74
FN1-227ENST00000498719 DDX46Q7L014 1031 aaKnown RBP10.41□□□□□ -0.74
FN1-227ENST00000498719 TMC7Q7Z402 723 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 SVIPQ8NHG7 77 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 ZHX3Q9H4I2 956 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 COPRSQ9NQ92 184 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 ENAMQ9NRM1 1142 aa10.41□□□□□ -0.74
FN1-227ENST00000498719 ARFGEF2Q9Y6D5 1785 aa10.4□□□□□ -0.74
FN1-227ENST00000498719 MAP3K7O43318 606 aa10.4□□□□□ -0.74
FN1-227ENST00000498719 C21orf2O43822 256 aa10.4□□□□□ -0.74
FN1-227ENST00000498719 ZRANB2O95218 330 aaKnown RBP eCLIP10.4□□□□□ -0.74
FN1-227ENST00000498719 PODNQ7Z5L7 613 aa10.4□□□□□ -0.74
FN1-227ENST00000498719 FUCA2Q9BTY2 467 aa10.4□□□□□ -0.74
FN1-227ENST00000498719 LRRC27Q9C0I9 530 aa10.4□□□□□ -0.74
FN1-227ENST00000498719 MUC3BQ9H195 1237 aa10.4□□□□□ -0.74
FN1-227ENST00000498719 SH3BP1Q9Y3L3 701 aa10.4□□□□□ -0.74
FN1-227ENST00000498719 MRC1P22897 1456 aa10.4□□□□□ -0.74
FN1-227ENST00000498719 ZNF609O15014 1411 aa10.4□□□□□ -0.75
FN1-227ENST00000498719 DYTNA2CJ06 578 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 PPP1R12AO14974 1030 aaPredicted RBP10.39□□□□□ -0.75
FN1-227ENST00000498719 AP5Z1O43299 807 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 JAK2O60674 1132 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 TPM2P07951 284 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 CDKN1CP49918 316 aaPredicted RBP10.39□□□□□ -0.75
FN1-227ENST00000498719 KCTD2Q14681 263 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 CAMK4Q16566 473 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 RNF20Q5VTR2 975 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 KANK3Q6NY19 840 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 JAMLQ86YT9 394 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms