RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 NCAPHQ15003 741 aa11.24□□□□□ -0.61
SNX13-212ENST00000498463 DBN1Q16643 649 aa11.24□□□□□ -0.61
SNX13-212ENST00000498463 FAM182BQ5T319 152 aa11.24□□□□□ -0.61
SNX13-212ENST00000498463 VHLLQ6RSH7 139 aa11.24□□□□□ -0.61
SNX13-212ENST00000498463 GABBR1Q9UBS5 961 aa11.24□□□□□ -0.61
SNX13-212ENST00000498463 THRAP3Q9Y2W1 955 aaKnown RBP11.24□□□□□ -0.61
SNX13-212ENST00000498463 TPD52L2O43399 206 aaKnown RBP11.23□□□□□ -0.61
SNX13-212ENST00000498463 MAN1A2O60476 641 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 MYCLP1P12525 358 aaPredicted RBP11.23□□□□□ -0.61
SNX13-212ENST00000498463 TBC1D8BQ0IIM8 1120 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 ZYXQ15942 572 aaKnown RBP11.23□□□□□ -0.61
SNX13-212ENST00000498463 LONRF2Q1L5Z9 754 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 SLC10A6Q3KNW5 377 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 SPNS2Q8IVW8 549 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 SGSM3Q96HU1 749 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 SLC26A8Q96RN1 970 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 UBE2OQ9C0C9 1292 aaKnown RBP11.23□□□□□ -0.61
SNX13-212ENST00000498463 ADAM19Q9H013 955 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 PRR12Q9ULL5 1215 aa11.23□□□□□ -0.61
SNX13-212ENST00000498463 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
SNX13-212ENST00000498463 GSTP1P09211 210 aaKnown RBP11.22□□□□□ -0.61
SNX13-212ENST00000498463 ACRP10323 421 aa11.22□□□□□ -0.61
SNX13-212ENST00000498463 EXOSC10Q01780 885 aaKnown RBP11.22□□□□□ -0.61
SNX13-212ENST00000498463 AP3B2Q13367 1082 aa11.22□□□□□ -0.61
SNX13-212ENST00000498463 OVOS1Q6IE37 1185 aa11.22□□□□□ -0.61
SNX13-212ENST00000498463 ZBTB38Q8NAP3 1195 aaPredicted RBP11.22□□□□□ -0.61
SNX13-212ENST00000498463 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
SNX13-212ENST00000498463 TRERF1Q96PN7 1200 aa11.22□□□□□ -0.61
SNX13-212ENST00000498463 CACNA2D2Q9NY47 1150 aa11.22□□□□□ -0.61
SNX13-212ENST00000498463 GMIPQ9P107 970 aa11.22□□□□□ -0.61
SNX13-212ENST00000498463 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 GFRA2O00451 464 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 SUSD5O60279 629 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 AVPP01185 164 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 FGFR3P22607 806 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 PTSQ03393 145 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
SNX13-212ENST00000498463 BRDTQ58F21 947 aaPredicted RBP11.21□□□□□ -0.61
SNX13-212ENST00000498463 WIPI1Q5MNZ9 446 aaPredicted RBP11.21□□□□□ -0.61
SNX13-212ENST00000498463 UNC5AQ6ZN44 842 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 LRRC47Q8N1G4 583 aaKnown RBP11.21□□□□□ -0.61
SNX13-212ENST00000498463 MICALL1Q8N3F8 863 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 PHAXQ9H814 394 aaKnown RBP11.21□□□□□ -0.61
SNX13-212ENST00000498463 CORINQ9Y5Q5 1042 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 EID1Q9Y6B2 187 aa11.21□□□□□ -0.61
SNX13-212ENST00000498463 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 SLC35F4A4IF30 521 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 PEX14O75381 377 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 CPB1P15086 417 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 IKBKEQ14164 716 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 ZC3H12BQ5HYM0 836 aaKnown RBP11.2□□□□□ -0.62
SNX13-212ENST00000498463 FAM35AQ86V20 835 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 LACRTQ9GZZ8 138 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 EPN3Q9H201 632 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 CAAP1Q9H8G2 361 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 PCDHB10Q9UN67 800 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 PCDHA4Q9UN74 947 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 TRIM33Q9UPN9 1127 aa11.2□□□□□ -0.62
SNX13-212ENST00000498463 A0A087X0B3 334 aa11.19□□□□□ -0.62
SNX13-212ENST00000498463 TBX4P57082 545 aa11.19□□□□□ -0.62
SNX13-212ENST00000498463 PABPC4Q13310 644 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNX13-212ENST00000498463 MLECQ14165 292 aa11.19□□□□□ -0.62
SNX13-212ENST00000498463 CBX2Q14781 532 aaPredicted RBP11.19□□□□□ -0.62
SNX13-212ENST00000498463 CCDC146Q8IYE0 955 aa11.19□□□□□ -0.62
SNX13-212ENST00000498463 ATG4CQ96DT6 458 aa11.19□□□□□ -0.62
SNX13-212ENST00000498463 ZNF837Q96EG3 531 aaPredicted RBP11.19□□□□□ -0.62
SNX13-212ENST00000498463 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
SNX13-212ENST00000498463 MAGEC2Q9UBF1 373 aaPredicted RBP11.19□□□□□ -0.62
SNX13-212ENST00000498463 REV1Q9UBZ9 1251 aa11.19□□□□□ -0.62
SNX13-212ENST00000498463 IQCA1LA6NCM1 817 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 FAM187AA6NFU0 413 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 PDE8AO60658 829 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 NME1P15531 152 aaKnown RBP11.18□□□□□ -0.62
SNX13-212ENST00000498463 CT47A1Q5JQC4 288 aaPredicted RBP11.18□□□□□ -0.62
SNX13-212ENST00000498463 PERM1Q5SV97 790 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 NLRC3Q7RTR2 1065 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 SYT9Q86SS6 491 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 DDX42Q86XP3 938 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNX13-212ENST00000498463 GPBAR1Q8TDU6 330 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 ACSBG1Q96GR2 724 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 MYH16Q9H6N6 1097 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 NAGPAQ9UK23 515 aa11.18□□□□□ -0.62
SNX13-212ENST00000498463 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
SNX13-212ENST00000498463 DNAJA2O60884 412 aa11.17□□□□□ -0.62
SNX13-212ENST00000498463 SOX5P35711 763 aa11.17□□□□□ -0.62
SNX13-212ENST00000498463 INTS3Q68E01 1043 aaKnown RBP11.17□□□□□ -0.62
SNX13-212ENST00000498463 KIAA1211LQ6NV74 962 aa11.17□□□□□ -0.62
SNX13-212ENST00000498463 LRFN4Q6PJG9 635 aa11.17□□□□□ -0.62
SNX13-212ENST00000498463 GTPBP3Q969Y2 492 aaKnown RBP11.17□□□□□ -0.62
SNX13-212ENST00000498463 PLPPR2Q96GM1 343 aa11.17□□□□□ -0.62
SNX13-212ENST00000498463 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
SNX13-212ENST00000498463 SMG9Q9H0W8 520 aaKnown RBP11.17□□□□□ -0.62
SNX13-212ENST00000498463 SLC22A31A6NKX4 558 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 SOBPA7XYQ1 873 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 RFPL3O75679 317 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 EPHA1P21709 976 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 INPP5AQ14642 412 aa11.16□□□□□ -0.62
SNX13-212ENST00000498463 ZNF468Q5VIY5 522 aaPredicted RBP11.16□□□□□ -0.62
SNX13-212ENST00000498463 RAVER1Q8IY67 606 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms