RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 FCHSD1Q86WN1 690 aa8.67□□□□□ -1.02
PAXBP1-209ENST00000497873 COL4A3BPQ9Y5P4 624 aa8.67□□□□□ -1.02
PAXBP1-209ENST00000497873 RGS9O75916 674 aaPredicted RBP8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 SQSTM1Q13501 440 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 INPP5AQ14642 412 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 WIPI1Q5MNZ9 446 aaPredicted RBP8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 SCARA3Q6AZY7 606 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 TTC6Q86TZ1 520 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 HOMER1Q86YM7 354 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 IL22RA1Q8N6P7 574 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 SLKQ9H2G2 1235 aaPredicted RBP8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 NOP58Q9Y2X3 529 aaKnown RBP8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 CCDC88BA6NC98 1476 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 BAZ1BQ9UIG0 1483 aaKnown RBP8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 DNAJC6O75061 913 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 HTR3BO95264 441 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 ARAFP10398 606 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 ANAPC15P60006 121 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 SPATC1Q76KD6 591 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 ZCRB1Q8TBF4 217 aaKnown RBP8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 SPC25Q9HBM1 224 aa8.66□□□□□ -1.02
PAXBP1-209ENST00000497873 GFRA2O00451 464 aa8.65□□□□□ -1.02
PAXBP1-209ENST00000497873 PLPPR2Q96GM1 343 aa8.65□□□□□ -1.02
PAXBP1-209ENST00000497873 MDFIQ99750 246 aa8.65□□□□□ -1.02
PAXBP1-209ENST00000497873 CACNA2D2Q9NY47 1150 aa8.65□□□□□ -1.02
PAXBP1-209ENST00000497873 KDM2BQ8NHM5 1336 aa8.65□□□□□ -1.02
PAXBP1-209ENST00000497873 LINC01387J3KSC0 135 aa8.65□□□□□ -1.03
PAXBP1-209ENST00000497873 FAM178BQ8IXR5 827 aa8.65□□□□□ -1.03
PAXBP1-209ENST00000497873 NANOS1Q8WY41 292 aaKnown RBP8.65□□□□□ -1.03
PAXBP1-209ENST00000497873 TTC9Q92623 222 aa8.65□□□□□ -1.03
PAXBP1-209ENST00000497873 TMEM260Q9NX78 707 aa8.65□□□□□ -1.03
PAXBP1-209ENST00000497873 PPP1R12AO14974 1030 aaPredicted RBP8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 DIAPH1O60610 1272 aaKnown RBP8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 GUCY2CP25092 1073 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 LRRFIP1Q32MZ4 808 aaKnown RBP8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 LRFN4Q6PJG9 635 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 C19orf47Q8N9M1 422 aaKnown RBP8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 ZSCAN1Q8NBB4 408 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 CORO1BQ9BR76 489 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 CCDC86Q9H6F5 360 aaKnown RBP8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 PCDH12Q9NPG4 1184 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 ELOA3CA0A087WX78 387 aaPredicted RBP8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 ELOA3DA6NLF2 546 aaPredicted RBP8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 CYP11A1P05108 521 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 GYS2P54840 703 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 C19orf57Q0VDD7 668 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 GAS6Q14393 721 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 POU4F3Q15319 338 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 ELOA3BQ3SY89 546 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 ELOA3Q8NG57 546 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 TMEM40Q8WWA1 233 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 TM9SF2Q99805 663 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 SOX17Q9H6I2 414 aaPredicted RBP8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 PPME1Q9Y570 386 aa8.64□□□□□ -1.03
PAXBP1-209ENST00000497873 C2orf27AQ580R0 203 aa8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 MRM1Q6IN84 353 aaKnown RBP8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 JPH1Q9HDC5 661 aaPredicted RBP8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 REV1Q9UBZ9 1251 aa8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 GGA1Q9UJY5 639 aa8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 PRR36Q9H6K5 1346 aa8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 MAOBP27338 520 aa8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 ARL4DP49703 201 aa8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 ZYXQ15942 572 aaKnown RBP8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 GRIK5Q16478 980 aa8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 KIAA0907Q7Z7F0 614 aaPredicted RBP8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 BRINP2Q9C0B6 783 aa8.63□□□□□ -1.03
PAXBP1-209ENST00000497873 MEIS3P2A8K0S8 358 aa8.62□□□□□ -1.03
PAXBP1-209ENST00000497873 BAG6P46379 1132 aa8.62□□□□□ -1.03
PAXBP1-209ENST00000497873 LAPTM4AQ15012 233 aa8.62□□□□□ -1.03
PAXBP1-209ENST00000497873 C16orf86Q6ZW13 317 aa8.62□□□□□ -1.03
PAXBP1-209ENST00000497873 CACTIN-AS1Q8N1I8 211 aa8.62□□□□□ -1.03
PAXBP1-209ENST00000497873 PRKAB1Q9Y478 270 aa8.62□□□□□ -1.03
PAXBP1-209ENST00000497873 SNCAIPQ9Y6H5 919 aa8.62□□□□□ -1.03
PAXBP1-209ENST00000497873 FAM86C2PA6NEL3 165 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 CTSBP07858 339 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 PLCG1P19174 1290 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 ALAS2P22557 587 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 PIP4K2BP78356 416 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 SSRP1Q08945 709 aaKnown RBP8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 PDE3AQ14432 1141 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 TKFCQ3LXA3 575 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 HDXQ7Z353 690 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 THAP3Q8WTV1 239 aaPredicted RBP8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 CARD10Q9BWT7 1032 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 NRSN2Q9GZP1 204 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 ZMYM5Q9UJ78 669 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 DCDC2CA8MYV0 355 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 DNAJA2O60884 412 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 LIG1P18858 919 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 OVOS1Q6IE37 1185 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 FAM117BQ6P1L5 589 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 ELMO3Q96BJ8 720 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 WDR89Q96FK6 387 aaPredicted RBP8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 CSADQ9Y600 493 aa8.61□□□□□ -1.03
PAXBP1-209ENST00000497873 SLC22A31A6NKX4 558 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 UPK3BL1B0FP48 263 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 C11orf95C9JLR9 678 aaPredicted RBP8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 UPK3BL2E5RIL1 263 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 ZNF862O60290 1169 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms