RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RAC1P63000 192 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 DUOXA2Q1HG44 320 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 DPH6Q7L8W6 267 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 CSRNP1Q96S65 589 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 PAIP2Q9BPZ3 127 aaKnown RBP3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 HMX2A2RU54 273 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 H3BRJ5 948 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 DYNC1LI2O43237 492 aaPredicted RBP3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 PARNO95453 639 aaKnown RBP3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 HOXD8P13378 290 aaPredicted RBP3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 MAOBP27338 520 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 CLEC4GQ6UXB4 293 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 GPATCH3Q96I76 525 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 SEMA6BQ9H3T3 888 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 METTL14Q9HCE5 456 aaKnown RBP3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 RPGRIP1LQ68CZ1 1315 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 CELA3AP09093 270 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 CDK8P49336 464 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 ZC3H6P61129 1189 aaKnown RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 PDE3BQ13370 1112 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 NAALADL2Q58DX5 795 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 FBXO11Q86XK2 927 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 SMC5Q8IY18 1101 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 GRIN3AQ8TCU5 1115 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 LENG1Q96BZ8 264 aaPredicted RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 DUSP9Q99956 384 aaKnown RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 NRSN2Q9GZP1 204 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 TMX4Q9H1E5 349 aaPredicted RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 PNNQ9H307 717 aaKnown RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 NLRP2Q9NX02 1062 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 IPO8O15397 1037 aaKnown RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 LETM1O95202 739 aaPredicted RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 ZNF16P17020 682 aaPredicted RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 PCSK7Q16549 785 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 MAP3K11Q16584 847 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 GALNT12Q8IXK2 581 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 TMEM102Q8N9M5 508 aaPredicted RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 C3orf58Q8NDZ4 430 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 PMM1Q92871 262 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 ITFG2Q969R8 447 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 ASB16Q96NS5 453 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 KRTAP17-1Q9BYP8 105 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 CLEC4MQ9H2X3 399 aaPredicted RBP3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 EFCC1Q9HA90 598 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 SEC31BQ9NQW1 1179 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 GABBR1Q9UBS5 961 aa3.82□□□□□ -1.8
SNRNP48-202ENST00000496946 SBNO2Q9Y2G9 1366 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 F8W735 103 aaPredicted RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 LDHBP07195 334 aaKnown RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 PCDH1Q08174 1060 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 ENOX2Q16206 610 aaKnown RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 UVSSAQ2YD98 709 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 PRSS36Q5K4E3 855 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 MAP1SQ66K74 1059 aaPredicted RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 IGF2-ASQ6U949 168 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 TXNRD3Q86VQ6 643 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 NPAS4Q8IUM7 802 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 ARMC10Q8N2F6 343 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 C12orf50Q8NA57 414 aaPredicted RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 SNRNP27Q8WVK2 155 aaKnown RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 FAM210AQ96ND0 272 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 C8orf37Q96NL8 207 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 BHLHE41Q9C0J9 482 aaPredicted RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 ZNF576Q9H609 170 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 AKTIPQ9H8T0 292 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 C11orf16Q9NQ32 467 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 CSADQ9Y600 493 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 ZCCHC6Q5VYS8 1495 aaKnown RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 hCG_2014768A0A024R1R8 64 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 PTPN11Q06124 597 aaPredicted RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 FMR1Q06787 632 aaKnown RBP eCLIP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 SF3A1Q15459 793 aaKnown RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 SGO2Q562F6 1265 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 AKAP4Q5JQC9 854 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 DTHD1Q6ZMT9 781 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 FBXL6Q8N531 539 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 GTPBP4Q9BZE4 634 aaKnown RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 MAF1Q9H063 256 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 STK26Q9P289 416 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 GPN3Q9UHW5 284 aaPredicted RBP3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 ANAPC4Q9UJX5 808 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 CEP83Q9Y592 693 aa3.81□□□□□ -1.8
SNRNP48-202ENST00000496946 CCDC194A0A1B0GVG4 234 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 ENC1O14682 589 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 STK10O94804 968 aaKnown RBP3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 APBA3O96018 575 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 COPB2P35606 906 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 IGBP1P78318 339 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 PLCB3Q01970 1234 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 NEXNQ0ZGT2 675 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 NKAPLQ5M9Q1 402 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 MTERF4Q7Z6M4 381 aaKnown RBP3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 RPAINQ86UA6 219 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 GIPC2Q8TF65 315 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 FBLIM1Q8WUP2 373 aa3.8□□□□□ -1.8
SNRNP48-202ENST00000496946 BCL2L13Q9BXK5 485 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms