RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 TBX2Q13207 712 aaPredicted RBP17.14■□□□□ 0.33
MACF1-223ENST00000496360 AACSQ86V21 672 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 LINC00301Q8NCQ3 95 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 WDR24Q96S15 920 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 NEDD4P46934 1319 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 CCDC196A0A1B0GTZ2 297 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 ERVV-2B6SEH9 535 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 NBPF7P0C2Y1 421 aaPredicted RBP17.14■□□□□ 0.33
MACF1-223ENST00000496360 NDUFA8P51970 172 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 CFAP100Q494V2 611 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 LRRC31Q6UY01 552 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 DRC1Q96MC2 740 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 CDC23Q9UJX2 597 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
MACF1-223ENST00000496360 HMGB2P26583 209 aaKnown RBP17.13■□□□□ 0.33
MACF1-223ENST00000496360 SF3A1Q15459 793 aaKnown RBP17.13■□□□□ 0.33
MACF1-223ENST00000496360 BRAPQ7Z569 592 aa17.13■□□□□ 0.33
MACF1-223ENST00000496360 AGXT2Q9BYV1 514 aa17.13■□□□□ 0.33
MACF1-223ENST00000496360 CCDC172P0C7W6 258 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 CMA1P23946 247 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 MCM3P25205 808 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
MACF1-223ENST00000496360 STK38Q15208 465 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 DHX58Q96C10 678 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 ANKZF1Q9H8Y5 726 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 FAN1Q9Y2M0 1017 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 QSER1Q2KHR3 1735 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 ZNF202O95125 648 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 NAA15Q9BXJ9 866 aaKnown RBP17.12■□□□□ 0.33
MACF1-223ENST00000496360 HSD3B7Q9H2F3 369 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 EPC1Q9H2F5 836 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
MACF1-223ENST00000496360 TFCP2L1Q9NZI6 479 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
MACF1-223ENST00000496360 AARSP49588 968 aaKnown RBP eCLIP17.11■□□□□ 0.333e-8■■□□□ 12.6
MACF1-223ENST00000496360 MCM6Q14566 821 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 ELOA2Q8IYF1 753 aaPredicted RBP17.11■□□□□ 0.33
MACF1-223ENST00000496360 CCDC12Q8WUD4 166 aaPredicted RBP17.11■□□□□ 0.33
MACF1-223ENST00000496360 ZNF274Q96GC6 653 aaPredicted RBP17.11■□□□□ 0.33
MACF1-223ENST00000496360 MTFR1LQ9H019 292 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 PPP1R1BQ9UD71 204 aaPredicted RBP17.11■□□□□ 0.33
MACF1-223ENST00000496360 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 A0A1B0GVL5 298 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 CCDC175P0C221 793 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 DHX32Q7L7V1 743 aaKnown RBP17.11■□□□□ 0.33
MACF1-223ENST00000496360 CNNM3Q8NE01 707 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 ZBTB9Q96C00 473 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 DONSONQ9NYP3 566 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
MACF1-223ENST00000496360 PNPLA7Q6ZV29 1317 aa17.11■□□□□ 0.33
MACF1-223ENST00000496360 C5P01031 1676 aa17.1■□□□□ 0.33
MACF1-223ENST00000496360 MRC1P22897 1456 aa17.1■□□□□ 0.33
MACF1-223ENST00000496360 A0A087WWV3 80 aa17.1■□□□□ 0.33
MACF1-223ENST00000496360 SPTLC2O15270 562 aa17.1■□□□□ 0.33
MACF1-223ENST00000496360 CABP4P57796 275 aa17.1■□□□□ 0.33
MACF1-223ENST00000496360 WHAMMP3Q1A5X7 153 aa17.1■□□□□ 0.33
MACF1-223ENST00000496360 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
MACF1-223ENST00000496360 FTOQ9C0B1 505 aaKnown RBP eCLIP17.1■□□□□ 0.33
MACF1-223ENST00000496360 LOC102724428A0A0B4J2F2 783 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 SIK1P57059 783 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.333e-8■■■■■ 28.5
MACF1-223ENST00000496360 CASP8Q14790 479 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 WDR93Q6P2C0 686 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 TAF1LQ8IZX4 1826 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 KIF5CO60282 957 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 CTDNEP1O95476 244 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 ATP6V1AP38606 617 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 PTGER2P43116 358 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 COL9A3Q14050 684 aaPredicted RBP17.09■□□□□ 0.33
MACF1-223ENST00000496360 POTEDQ86YR6 584 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 FBXL16Q8N461 479 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 PANX2Q96RD6 677 aa17.09■□□□□ 0.33
MACF1-223ENST00000496360 PHAXQ9H814 394 aaKnown RBP17.09■□□□□ 0.33
MACF1-223ENST00000496360 FAM237AA0A1B0GTK4 181 aa17.08■□□□□ 0.33
MACF1-223ENST00000496360 WDHD1O75717 1129 aaPredicted RBP17.08■□□□□ 0.33
MACF1-223ENST00000496360 APPP05067 770 aa17.08■□□□□ 0.33
MACF1-223ENST00000496360 MAP9Q49MG5 647 aa17.08■□□□□ 0.33
MACF1-223ENST00000496360 SPECC1LQ69YQ0 1117 aa17.08■□□□□ 0.33
MACF1-223ENST00000496360 SLC16A10Q8TF71 515 aa17.08■□□□□ 0.33
MACF1-223ENST00000496360 FBXW7Q969H0 707 aa17.08■□□□□ 0.33
MACF1-223ENST00000496360 CXorf56Q9H5V9 222 aa17.08■□□□□ 0.33
MACF1-223ENST00000496360 ABCB6Q9NP58 842 aa17.08■□□□□ 0.33
MACF1-223ENST00000496360 TAF6LQ9Y6J9 622 aa17.08■□□□□ 0.33
MACF1-223ENST00000496360 CARMIL3Q8ND23 1372 aa17.08■□□□□ 0.32
MACF1-223ENST00000496360 ATP1A3P13637 1013 aa17.08■□□□□ 0.32
MACF1-223ENST00000496360 ZNF589Q86UQ0 364 aaPredicted RBP17.08■□□□□ 0.32
MACF1-223ENST00000496360 ANKRD20A12PQ8NF67 263 aa17.08■□□□□ 0.32
MACF1-223ENST00000496360 A1CFQ9NQ94 594 aaKnown RBP17.08■□□□□ 0.32
MACF1-223ENST00000496360 MYO1AQ9UBC5 1043 aa17.08■□□□□ 0.32
MACF1-223ENST00000496360 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
MACF1-223ENST00000496360 JMYQ8N9B5 988 aa17.07■□□□□ 0.32
MACF1-223ENST00000496360 TC2NQ8N9U0 490 aa17.07■□□□□ 0.32
MACF1-223ENST00000496360 NECTIN2Q92692 538 aa17.07■□□□□ 0.32
MACF1-223ENST00000496360 DPF2Q92785 391 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms