RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 FMNL1O95466 1100 aaPredicted RBP14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 GNRH1P01148 92 aa14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 BCRP11274 1271 aa14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 RARSP54136 660 aaKnown RBP14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 PICALMQ13492 652 aa14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 DZIP1Q86YF9 867 aaKnown RBP14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 XAGE2Q96GT9 111 aa14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 ZHX2Q9Y6X8 837 aa14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 PHIPQ8WWQ0 1821 aa14.96□□□□□ -0.01
SHROOM1-206ENST00000495680 MYPNQ86TC9 1320 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 MGAMO43451 1857 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 CXCL11O14625 94 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 ZBTB22O15209 634 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 SRGAP3O43295 1099 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 CT47B1P0C2W7 299 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 PTPRAP18433 802 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 BTDP43251 543 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 PRMT2P55345 433 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 PRKCZQ05513 592 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 PI16Q6UXB8 463 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 ZSCAN29Q8IWY8 852 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 COLQQ9Y215 455 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
SHROOM1-206ENST00000495680 A0A0G2JLL6 359 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 FAM196BA6NMK8 535 aa14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 H0YGN5 161 aa14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 RHBDL3P58872 404 aa14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 MAP3K10Q02779 954 aa14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 MECOMQ03112 1051 aa14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 TBC1D9Q6ZT07 1266 aa14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 PRRT2Q7Z6L0 340 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 ZGPATQ8N5A5 531 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 FAM163AQ96GL9 167 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 PARK7Q99497 189 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 GABRQQ9UN88 632 aa14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 AFG3L2Q9Y4W6 797 aa14.94□□□□□ -0.02
SHROOM1-206ENST00000495680 MROH7-TTC4A0A0A0MT08 1334 aa14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 PDS5AQ29RF7 1337 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 GRK4P32298 578 aa14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 FXR1P51114 621 aaKnown RBP eCLIP14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 MTX1Q13505 466 aa14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 GADL1Q6ZQY3 521 aa14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 RAET1EQ8TD07 263 aa14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 PICK1Q9NRD5 415 aa14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 HMG20BQ9P0W2 317 aa14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 TRIOBPQ9H2D6 2365 aa14.93□□□□□ -0.02
SHROOM1-206ENST00000495680 GPR75-ASB3A0A0A6YYF3 556 aa14.92□□□□□ -0.02
SHROOM1-206ENST00000495680 NEUROD6Q96NK8 337 aa14.92□□□□□ -0.02
SHROOM1-206ENST00000495680 PNMA6EA0A0J9YXQ4 647 aa14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 TRIM75PA6NK02 468 aa14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 CCL5P13501 91 aa14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 TRIM27P14373 513 aa14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 HOXD10P28358 340 aa14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 FCGRTP55899 365 aa14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 RRP1BQ14684 758 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 MVPQ14764 893 aaKnown RBP14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 ERICH6Q7L0X2 663 aa14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 HDAC5Q9UQL6 1122 aa14.91□□□□□ -0.02
SHROOM1-206ENST00000495680 DOCK3Q8IZD9 2030 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 CTNND1O60716 968 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 BCAR3O75815 825 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 GNAI3P08754 354 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 ELNP15502 786 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 TREML2Q5T2D2 321 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 SPTY2D1Q68D10 685 aaPredicted RBP14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 FASTKD5Q7L8L6 764 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 UBE2Q1Q7Z7E8 422 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 SPATA5Q8NB90 893 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 ARHGAP45Q92619 1136 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 NSUN4Q96CB9 384 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 UNC93B1Q9H1C4 597 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 AKAP2Q9Y2D5 859 aa14.9□□□□□ -0.02
SHROOM1-206ENST00000495680 GJB1P08034 283 aa14.89□□□□□ -0.03
SHROOM1-206ENST00000495680 MCAMP43121 646 aa14.89□□□□□ -0.03
SHROOM1-206ENST00000495680 GJA8P48165 433 aa14.89□□□□□ -0.03
SHROOM1-206ENST00000495680 FLT3LGP49771 235 aa14.89□□□□□ -0.03
SHROOM1-206ENST00000495680 SLF2Q8IX21 1173 aa14.89□□□□□ -0.03
SHROOM1-206ENST00000495680 CLUAP1Q96AJ1 413 aa14.89□□□□□ -0.03
SHROOM1-206ENST00000495680 RNF208Q9H0X6 261 aa14.89□□□□□ -0.03
SHROOM1-206ENST00000495680 BIN2Q9UBW5 565 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-206ENST00000495680 SIPA1L1O43166 1804 aa14.88□□□□□ -0.03
SHROOM1-206ENST00000495680 ATAD5Q96QE3 1844 aa14.88□□□□□ -0.03
SHROOM1-206ENST00000495680 ARID4AP29374 1257 aaPredicted RBP14.88□□□□□ -0.03
SHROOM1-206ENST00000495680 AGTPBP1Q9UPW5 1226 aa14.88□□□□□ -0.03
SHROOM1-206ENST00000495680 SLC45A1Q9Y2W3 748 aa14.88□□□□□ -0.03
SHROOM1-206ENST00000495680 ADCY3O60266 1144 aa14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 TBC1D12O60347 775 aa14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 GNAI2P04899 355 aa14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 SPP2Q13103 211 aa14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 ANKRD13CQ8N6S4 541 aa14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 SLAIN1Q8ND83 568 aa14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 SMCR8Q8TEV9 937 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 U2AF1L4Q8WU68 220 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 DPF3Q92784 378 aa14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 FRAT1Q92837 279 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 OSBPL5Q9H0X9 879 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.87□□□□□ -0.03
SHROOM1-206ENST00000495680 RAI14Q9P0K7 980 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms