RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 BTDP43251 543 aa27.31■■□□□ 1.96
HDDC3-203ENST00000494993 PRMT2P55345 433 aa27.31■■□□□ 1.96
HDDC3-203ENST00000494993 ATF7IPQ6VMQ6 1270 aa27.31■■□□□ 1.96
HDDC3-203ENST00000494993 ZSCAN29Q8IWY8 852 aaPredicted RBP27.31■■□□□ 1.96
HDDC3-203ENST00000494993 TNNQ9UQP3 1299 aa27.31■■□□□ 1.96
HDDC3-203ENST00000494993 MROH7-TTC4A0A0A0MT08 1334 aa27.31■■□□□ 1.96
HDDC3-203ENST00000494993 CXCL11O14625 94 aa27.3■■□□□ 1.96
HDDC3-203ENST00000494993 ERICH6Q7L0X2 663 aa27.3■■□□□ 1.96
HDDC3-203ENST00000494993 SCYL3Q8IZE3 742 aa27.3■■□□□ 1.96
HDDC3-203ENST00000494993 NEUROD6Q96NK8 337 aa27.3■■□□□ 1.96
HDDC3-203ENST00000494993 DDX4Q9NQI0 724 aaKnown RBP27.3■■□□□ 1.96
HDDC3-203ENST00000494993 BCAR3O75815 825 aa27.29■■□□□ 1.96
HDDC3-203ENST00000494993 GNAI2P04899 355 aa27.29■■□□□ 1.96
HDDC3-203ENST00000494993 MAP3K10Q02779 954 aa27.29■■□□□ 1.96
HDDC3-203ENST00000494993 SH3TC2Q8TF17 1288 aa27.29■■□□□ 1.96
HDDC3-203ENST00000494993 FRAT1Q92837 279 aaPredicted RBP27.29■■□□□ 1.96
HDDC3-203ENST00000494993 ATAD5Q96QE3 1844 aa27.29■■□□□ 1.96
HDDC3-203ENST00000494993 DDTLA6NHG4 134 aaPredicted RBP27.28■■□□□ 1.96
HDDC3-203ENST00000494993 ECM2O94769 699 aaPredicted RBP27.28■■□□□ 1.96
HDDC3-203ENST00000494993 CTGFP29279 349 aa27.28■■□□□ 1.96
HDDC3-203ENST00000494993 MECOMQ03112 1051 aa27.28■■□□□ 1.96
HDDC3-203ENST00000494993 PICALMQ13492 652 aa27.28■■□□□ 1.96
HDDC3-203ENST00000494993 SLC4A8Q2Y0W8 1093 aa27.28■■□□□ 1.96
HDDC3-203ENST00000494993 PICK1Q9NRD5 415 aa27.28■■□□□ 1.96
HDDC3-203ENST00000494993 HMG20BQ9P0W2 317 aa27.28■■□□□ 1.96
HDDC3-203ENST00000494993 GPR75-ASB3A0A0A6YYF3 556 aa27.27■■□□□ 1.96
HDDC3-203ENST00000494993 PNMA6EA0A0J9YXQ4 647 aa27.27■■□□□ 1.96
HDDC3-203ENST00000494993 PTPRAP18433 802 aa27.27■■□□□ 1.96
HDDC3-203ENST00000494993 PSMC4P43686 418 aa27.27■■□□□ 1.96
HDDC3-203ENST00000494993 GPAT2Q6NUI2 795 aa27.27■■□□□ 1.96
HDDC3-203ENST00000494993 ZNF384Q8TF68 577 aa27.27■■□□□ 1.96
HDDC3-203ENST00000494993 TRIM47Q96LD4 638 aa27.27■■□□□ 1.96
HDDC3-203ENST00000494993 PARK7Q99497 189 aaKnown RBP27.27■■□□□ 1.96
HDDC3-203ENST00000494993 RHBDL3P58872 404 aa27.26■■□□□ 1.95
HDDC3-203ENST00000494993 GORABQ5T7V8 394 aa27.26■■□□□ 1.95
HDDC3-203ENST00000494993 CLUAP1Q96AJ1 413 aa27.26■■□□□ 1.95
HDDC3-203ENST00000494993 GCC1Q96CN9 775 aa27.26■■□□□ 1.95
HDDC3-203ENST00000494993 SRRDQ9UH36 339 aa27.26■■□□□ 1.95
HDDC3-203ENST00000494993 ZHX2Q9Y6X8 837 aa27.26■■□□□ 1.95
HDDC3-203ENST00000494993 A0A0G2JLL6 359 aaPredicted RBP27.25■■□□□ 1.95
HDDC3-203ENST00000494993 MYCP01106 439 aaPredicted RBP27.25■■□□□ 1.95
HDDC3-203ENST00000494993 SLURP2P0DP57 97 aa27.25■■□□□ 1.95
HDDC3-203ENST00000494993 ARID4AP29374 1257 aaPredicted RBP27.25■■□□□ 1.95
HDDC3-203ENST00000494993 G3BP1Q13283 466 aaKnown RBP eCLIP27.25■■□□□ 1.95
HDDC3-203ENST00000494993 PI16Q6UXB8 463 aa27.25■■□□□ 1.95
HDDC3-203ENST00000494993 PRRT2Q7Z6L0 340 aaPredicted RBP27.25■■□□□ 1.95
HDDC3-203ENST00000494993 SPATA5Q8NB90 893 aa27.25■■□□□ 1.95
HDDC3-203ENST00000494993 AFG3L2Q9Y4W6 797 aa27.25■■□□□ 1.95
HDDC3-203ENST00000494993 MYO5AQ9Y4I1 1855 aaKnown RBP27.25■■□□□ 1.95
HDDC3-203ENST00000494993 MAST2Q6P0Q8 1798 aa27.25■■□□□ 1.95
HDDC3-203ENST00000494993 CDK5RAP2Q96SN8 1893 aa27.24■■□□□ 1.95
HDDC3-203ENST00000494993 OSBPP22059 807 aa27.24■■□□□ 1.95
HDDC3-203ENST00000494993 HOXD10P28358 340 aa27.24■■□□□ 1.95
HDDC3-203ENST00000494993 FASTKD5Q7L8L6 764 aaKnown RBP27.24■■□□□ 1.95
HDDC3-203ENST00000494993 CTNND1O60716 968 aaKnown RBP27.23■■□□□ 1.95
HDDC3-203ENST00000494993 NPM3O75607 178 aaKnown RBP27.23■■□□□ 1.95
HDDC3-203ENST00000494993 FMNL1O95466 1100 aaPredicted RBP27.23■■□□□ 1.95
HDDC3-203ENST00000494993 LDHCP07864 332 aa27.23■■□□□ 1.95
HDDC3-203ENST00000494993 CYP2C8P10632 490 aa27.23■■□□□ 1.95
HDDC3-203ENST00000494993 BCRP11274 1271 aa27.23■■□□□ 1.95
HDDC3-203ENST00000494993 GSTO1P78417 241 aa27.23■■□□□ 1.95
HDDC3-203ENST00000494993 NSUN4Q96CB9 384 aaKnown RBP27.23■■□□□ 1.95
HDDC3-203ENST00000494993 PCDH10Q9P2E7 1040 aa27.23■■□□□ 1.95
HDDC3-203ENST00000494993 TBC1D9Q6ZT07 1266 aa27.22■■□□□ 1.95
HDDC3-203ENST00000494993 FOCADQ5VW36 1801 aa27.21■■□□□ 1.95
HDDC3-203ENST00000494993 COL2A1P02458 1487 aaPredicted RBP27.21■■□□□ 1.95
HDDC3-203ENST00000494993 MAP4K4O95819 1239 aaPredicted RBP27.21■■□□□ 1.95
HDDC3-203ENST00000494993 MCAMP43121 646 aa27.21■■□□□ 1.95
HDDC3-203ENST00000494993 GADL1Q6ZQY3 521 aa27.21■■□□□ 1.95
HDDC3-203ENST00000494993 TMEM57Q8N5G2 664 aa27.21■■□□□ 1.95
HDDC3-203ENST00000494993 RAET1EQ8TD07 263 aa27.21■■□□□ 1.95
HDDC3-203ENST00000494993 DOCK3Q8IZD9 2030 aa27.21■■□□□ 1.95
HDDC3-203ENST00000494993 MYPNQ86TC9 1320 aa27.2■■□□□ 1.95
HDDC3-203ENST00000494993 LOC285556D6RIA3 1793 aa27.2■■□□□ 1.95
HDDC3-203ENST00000494993 TBC1D12O60347 775 aa27.2■■□□□ 1.94
HDDC3-203ENST00000494993 UQCRFS1P1P0C7P4 283 aa27.2■■□□□ 1.94
HDDC3-203ENST00000494993 ZKSCAN2Q63HK3 967 aa27.2■■□□□ 1.94
HDDC3-203ENST00000494993 RAI14Q9P0K7 980 aa27.2■■□□□ 1.94
HDDC3-203ENST00000494993 SLC45A1Q9Y2W3 748 aa27.2■■□□□ 1.94
HDDC3-203ENST00000494993 SIPA1L1O43166 1804 aa27.19■■□□□ 1.94
HDDC3-203ENST00000494993 FCGRTP55899 365 aa27.19■■□□□ 1.94
HDDC3-203ENST00000494993 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.19■■□□□ 1.94
HDDC3-203ENST00000494993 GRK4P32298 578 aa27.18■■□□□ 1.94
HDDC3-203ENST00000494993 MTFR1Q15390 333 aa27.18■■□□□ 1.94
HDDC3-203ENST00000494993 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.18■■□□□ 1.94
HDDC3-203ENST00000494993 TRIM75PA6NK02 468 aa27.17■■□□□ 1.94
HDDC3-203ENST00000494993 FAM196BA6NMK8 535 aa27.17■■□□□ 1.94
HDDC3-203ENST00000494993 POLA2Q14181 598 aa27.17■■□□□ 1.94
HDDC3-203ENST00000494993 CCDC84Q86UT8 332 aaPredicted RBP27.17■■□□□ 1.94
HDDC3-203ENST00000494993 OSBPL5Q9H0X9 879 aaPredicted RBP27.17■■□□□ 1.94
HDDC3-203ENST00000494993 GPR108Q9NPR9 543 aa27.17■■□□□ 1.94
HDDC3-203ENST00000494993 LRP2BPQ9P2M1 347 aa27.17■■□□□ 1.94
HDDC3-203ENST00000494993 CEP290O15078 2479 aa27.17■■□□□ 1.94
HDDC3-203ENST00000494993 PRKCZQ05513 592 aa27.16■■□□□ 1.94
HDDC3-203ENST00000494993 TEX11Q8IYF3 940 aa27.15■■□□□ 1.94
HDDC3-203ENST00000494993 SSH3Q8TE77 659 aa27.15■■□□□ 1.94
HDDC3-203ENST00000494993 AGTPBP1Q9UPW5 1226 aa27.15■■□□□ 1.94
HDDC3-203ENST00000494993 ATP8B2P98198 1209 aa27.14■■□□□ 1.94
HDDC3-203ENST00000494993 TNNI3KQ59H18 835 aa27.14■■□□□ 1.94
HDDC3-203ENST00000494993 HABP4Q5JVS0 413 aaKnown RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms