RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 DNAJC2Q99543 621 aaKnown RBP17.49■□□□□ 0.39
SCAP-213ENST00000494938 BEGAINQ9BUH8 593 aa17.49■□□□□ 0.39
SCAP-213ENST00000494938 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
SCAP-213ENST00000494938 RNF186Q9NXI6 227 aa17.49■□□□□ 0.39
SCAP-213ENST00000494938 LBX1P52954 281 aa17.48■□□□□ 0.39
SCAP-213ENST00000494938 DCAF15Q66K64 600 aa17.48■□□□□ 0.39
SCAP-213ENST00000494938 TEX11Q8IYF3 940 aa17.48■□□□□ 0.39
SCAP-213ENST00000494938 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
SCAP-213ENST00000494938 ZKSCAN4Q969J2 545 aaPredicted RBP17.48■□□□□ 0.39
SCAP-213ENST00000494938 ZNF341Q9BYN7 854 aa17.48■□□□□ 0.39
SCAP-213ENST00000494938 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
SCAP-213ENST00000494938 TSKSQ9UJT2 592 aa17.48■□□□□ 0.39
SCAP-213ENST00000494938 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
SCAP-213ENST00000494938 THSD7BQ9C0I4 1608 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 CA12O43570 354 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 SLC9C2Q5TAH2 1124 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 TMED8Q6PL24 325 aaPredicted RBP17.47■□□□□ 0.39
SCAP-213ENST00000494938 WRNIP1Q96S55 665 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 NOL10Q9BSC4 688 aaKnown RBP17.47■□□□□ 0.39
SCAP-213ENST00000494938 OSBPL5Q9H0X9 879 aaPredicted RBP17.47■□□□□ 0.39
SCAP-213ENST00000494938 PRDM10Q9NQV6 1147 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 SNCAIPQ9Y6H5 919 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 ECM29Q5VYK3 1845 aa17.47■□□□□ 0.39
SCAP-213ENST00000494938 TCRBV5S4A2TA0A5A2 114 aa17.46■□□□□ 0.39
SCAP-213ENST00000494938 IGHDP01880 384 aa17.46■□□□□ 0.39
SCAP-213ENST00000494938 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
SCAP-213ENST00000494938 PDE6AP16499 860 aa17.46■□□□□ 0.39
SCAP-213ENST00000494938 PLCG2P16885 1265 aa17.46■□□□□ 0.39
SCAP-213ENST00000494938 INPP5BP32019 993 aa17.46■□□□□ 0.39
SCAP-213ENST00000494938 ZSCAN29Q8IWY8 852 aaPredicted RBP17.46■□□□□ 0.39
SCAP-213ENST00000494938 MIGA1Q8NAN2 632 aa17.46■□□□□ 0.39
SCAP-213ENST00000494938 OTUD7AQ8TE49 926 aaPredicted RBP17.46■□□□□ 0.39
SCAP-213ENST00000494938 TGFBRAP1Q8WUH2 860 aa17.46■□□□□ 0.39
SCAP-213ENST00000494938 OPTNQ96CV9 577 aa17.46■□□□□ 0.39
SCAP-213ENST00000494938 MYH13Q9UKX3 1938 aa17.45■□□□□ 0.38
SCAP-213ENST00000494938 TRPA1O75762 1119 aa17.45■□□□□ 0.38
SCAP-213ENST00000494938 SLFNL1Q499Z3 407 aa17.45■□□□□ 0.38
SCAP-213ENST00000494938 ANKRD45Q5TZF3 282 aa17.45■□□□□ 0.38
SCAP-213ENST00000494938 TSHZ3Q63HK5 1081 aa17.45■□□□□ 0.38
SCAP-213ENST00000494938 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
SCAP-213ENST00000494938 MS4A4AQ96JQ5 239 aa17.45■□□□□ 0.38
SCAP-213ENST00000494938 SAGE1Q9NXZ1 904 aa17.45■□□□□ 0.38
SCAP-213ENST00000494938 CSADQ9Y600 493 aa17.45■□□□□ 0.38
SCAP-213ENST00000494938 TESPA1A2RU30 521 aaPredicted RBP17.44■□□□□ 0.38
SCAP-213ENST00000494938 MANSC4A6NHS7 340 aaPredicted RBP17.44■□□□□ 0.38
SCAP-213ENST00000494938 TBC1D12O60347 775 aa17.44■□□□□ 0.38
SCAP-213ENST00000494938 INHBEP58166 350 aa17.44■□□□□ 0.38
SCAP-213ENST00000494938 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
SCAP-213ENST00000494938 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
SCAP-213ENST00000494938 ZNF532Q9HCE3 1301 aa17.44■□□□□ 0.38
SCAP-213ENST00000494938 SPDYE5A6NIY4 337 aa17.43■□□□□ 0.38
SCAP-213ENST00000494938 CHGBP05060 677 aa17.43■□□□□ 0.38
SCAP-213ENST00000494938 SREBF2Q12772 1141 aa17.43■□□□□ 0.38
SCAP-213ENST00000494938 ERO1BQ86YB8 467 aa17.43■□□□□ 0.38
SCAP-213ENST00000494938 MAPKAPK5Q8IW41 473 aa17.43■□□□□ 0.38
SCAP-213ENST00000494938 PTPN18Q99952 460 aa17.43■□□□□ 0.38
SCAP-213ENST00000494938 MYH2Q9UKX2 1941 aa17.43■□□□□ 0.38
SCAP-213ENST00000494938 ADD2P35612 726 aa17.42■□□□□ 0.38
SCAP-213ENST00000494938 IRX6P78412 446 aaPredicted RBP17.42■□□□□ 0.38
SCAP-213ENST00000494938 NOL9Q5SY16 702 aaKnown RBP17.42■□□□□ 0.38
SCAP-213ENST00000494938 METTL16Q86W50 562 aaKnown RBP17.42■□□□□ 0.38
SCAP-213ENST00000494938 IFNL1Q8IU54 200 aa17.42■□□□□ 0.38
SCAP-213ENST00000494938 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
SCAP-213ENST00000494938 SMC5Q8IY18 1101 aa17.42■□□□□ 0.38
SCAP-213ENST00000494938 FLT1P17948 1338 aa17.42■□□□□ 0.38
SCAP-213ENST00000494938 SALL3Q9BXA9 1300 aa17.42■□□□□ 0.38
SCAP-213ENST00000494938 MAGEB6P1A0A0J9YX57 407 aa17.41■□□□□ 0.38
SCAP-213ENST00000494938 PI4K2BQ8TCG2 481 aa17.41■□□□□ 0.38
SCAP-213ENST00000494938 OTUD5Q96G74 571 aa17.41■□□□□ 0.38
SCAP-213ENST00000494938 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
SCAP-213ENST00000494938 DHX36Q9H2U1 1008 aaKnown RBP17.41■□□□□ 0.38
SCAP-213ENST00000494938 R3HDMLQ9H3Y0 253 aa17.41■□□□□ 0.38
SCAP-213ENST00000494938 PI4KBQ9UBF8 816 aa17.41■□□□□ 0.38
SCAP-213ENST00000494938 PALD1Q9ULE6 856 aa17.41■□□□□ 0.38
SCAP-213ENST00000494938 TTC41PQ6P2S7 1318 aa17.41■□□□□ 0.38
SCAP-213ENST00000494938 FAM196BA6NMK8 535 aa17.4■□□□□ 0.38
SCAP-213ENST00000494938 IGF2BP3O00425 579 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCAP-213ENST00000494938 IRF6O14896 467 aa17.4■□□□□ 0.38
SCAP-213ENST00000494938 TBC1D8O95759 1140 aa17.4■□□□□ 0.38
SCAP-213ENST00000494938 PPATQ06203 517 aa17.4■□□□□ 0.38
SCAP-213ENST00000494938 RRP1BQ14684 758 aaKnown RBP17.4■□□□□ 0.38
SCAP-213ENST00000494938 UBE3CQ15386 1083 aa17.4■□□□□ 0.38
SCAP-213ENST00000494938 BRI3BPQ8WY22 251 aa17.4■□□□□ 0.38
SCAP-213ENST00000494938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCAP-213ENST00000494938 SAP30BPQ9UHR5 308 aaKnown RBP17.4■□□□□ 0.38
SCAP-213ENST00000494938 COL2A1P02458 1487 aaPredicted RBP17.39■□□□□ 0.37
SCAP-213ENST00000494938 CTNND1O60716 968 aaKnown RBP17.39■□□□□ 0.37
SCAP-213ENST00000494938 USP5P45974 858 aa17.39■□□□□ 0.37
SCAP-213ENST00000494938 GTF2A2P52657 109 aa17.39■□□□□ 0.37
SCAP-213ENST00000494938 PPIL2Q13356 520 aa17.39■□□□□ 0.37
SCAP-213ENST00000494938 FOXP4Q8IVH2 680 aaPredicted RBP17.39■□□□□ 0.37
SCAP-213ENST00000494938 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.39■□□□□ 0.371e-6■■■□□ 15.2
SCAP-213ENST00000494938 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
SCAP-213ENST00000494938 PTPRAP18433 802 aa17.38■□□□□ 0.37
SCAP-213ENST00000494938 MX1P20591 662 aa17.38■□□□□ 0.37
SCAP-213ENST00000494938 SCYL3Q8IZE3 742 aa17.38■□□□□ 0.37
SCAP-213ENST00000494938 LCORLQ8N3X6 602 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms