RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CCDC173Q0VFZ6 552 aa12.85□□□□□ -0.35
PDLIM1-205ENST00000493949 SLAIN1Q8ND83 568 aa12.85□□□□□ -0.35
PDLIM1-205ENST00000493949 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
PDLIM1-205ENST00000493949 MYD88Q99836 296 aa12.85□□□□□ -0.35
PDLIM1-205ENST00000493949 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
PDLIM1-205ENST00000493949 MYPNQ86TC9 1320 aa12.85□□□□□ -0.35
PDLIM1-205ENST00000493949 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
PDLIM1-205ENST00000493949 IRS2Q9Y4H2 1338 aa12.85□□□□□ -0.35
PDLIM1-205ENST00000493949 MFAP1P55081 439 aaKnown RBP12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 CTSWP56202 376 aa12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 CHD1LQ86WJ1 897 aa12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 ITPRIPQ8IWB1 547 aa12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 TDHQ8IZJ6 230 aa12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 ANP32BQ92688 251 aaKnown RBP12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 TRIM44Q96DX7 344 aaPredicted RBP12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 UNC93B1Q9H1C4 597 aa12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 CSADQ9Y600 493 aa12.84□□□□□ -0.35
PDLIM1-205ENST00000493949 ESPNB1AK53 854 aa12.83□□□□□ -0.36
PDLIM1-205ENST00000493949 LMOD3Q0VAK6 560 aa12.83□□□□□ -0.36
PDLIM1-205ENST00000493949 SNAPC2Q13487 334 aa12.83□□□□□ -0.36
PDLIM1-205ENST00000493949 C15orf52Q6ZUT6 534 aaKnown RBP12.83□□□□□ -0.36
PDLIM1-205ENST00000493949 ERO1BQ86YB8 467 aa12.83□□□□□ -0.36
PDLIM1-205ENST00000493949 SSH1Q8WYL5 1049 aa12.83□□□□□ -0.36
PDLIM1-205ENST00000493949 ANKRD2Q9GZV1 360 aa12.83□□□□□ -0.36
PDLIM1-205ENST00000493949 CRISPLD2Q9H0B8 497 aa12.83□□□□□ -0.36
PDLIM1-205ENST00000493949 BIN2Q9UBW5 565 aaPredicted RBP12.83□□□□□ -0.36
PDLIM1-205ENST00000493949 K7ELQ4 463 aaPredicted RBP12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 IRF6O14896 467 aa12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 GUCD1Q96NT3 240 aa12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 PPP1R9BQ96SB3 815 aa12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 GREM2Q9H772 168 aa12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 COL2A1P02458 1487 aaPredicted RBP12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 FAM205AQ6ZU69 1335 aa12.82□□□□□ -0.36
PDLIM1-205ENST00000493949 DNAH12Q6ZR08 3092 aa12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 ELL2O00472 640 aaPredicted RBP12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 IL1R1P14778 569 aa12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 NUCB2P80303 420 aa12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 PRKCZQ05513 592 aa12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 PPIL2Q13356 520 aa12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 NECAB2Q7Z6G3 386 aa12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 ANKRD23Q86SG2 305 aa12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 PXYLP1Q8TE99 480 aa12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 PAWRQ96IZ0 340 aaKnown RBP12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 ZNF70Q9UC06 446 aaPredicted RBP12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 CPA4Q9UI42 421 aa12.81□□□□□ -0.36
PDLIM1-205ENST00000493949 POTEMA6NI47 508 aa12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 F8W031 263 aaPredicted RBP12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 TFRCP02786 760 aaKnown RBP12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 RABEP1Q15276 862 aa12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 ANKLE1Q8NAG6 615 aa12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 CWC22Q9HCG8 908 aaKnown RBP12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 NCOR1O75376 2440 aa12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
PDLIM1-205ENST00000493949 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 SNAP23O00161 211 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 CDC45O75419 566 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 BCRP11274 1271 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 COL9A1P20849 921 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 IGHMBP2P38935 993 aaKnown RBP12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 FCGRTP55899 365 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 IRF5Q13568 498 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 C7orf61Q8IZ16 206 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 TMEM57Q8N5G2 664 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 TNPO1Q92973 898 aaKnown RBP12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 DEFB118Q96PH6 123 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 METTL22Q9BUU2 404 aaPredicted RBP12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 API5Q9BZZ5 524 aaKnown RBP12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 TMEM39BQ9GZU3 492 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 MBIPQ9NS73 344 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 SERPINA10Q9UK55 444 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 NOB1Q9ULX3 412 aaKnown RBP12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 GABRQQ9UN88 632 aa12.79□□□□□ -0.36
PDLIM1-205ENST00000493949 ADCY3O60266 1144 aa12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 INHAP05111 366 aa12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 TNNI2P48788 182 aa12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 ZNF445P59923 1031 aa12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 GNAI1P63096 354 aa12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 PPATQ06203 517 aa12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 MAP7D2Q96T17 732 aa12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 TDRD3Q9H7E2 651 aaKnown RBP12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 ZMYND8Q9ULU4 1186 aaPredicted RBP12.78□□□□□ -0.36
PDLIM1-205ENST00000493949 PDHXO00330 501 aa12.77□□□□□ -0.37
PDLIM1-205ENST00000493949 MCM5P33992 734 aa12.77□□□□□ -0.37
PDLIM1-205ENST00000493949 RBM5P52756 815 aaKnown RBP eCLIP12.77□□□□□ -0.37
PDLIM1-205ENST00000493949 DIS3LQ8TF46 1054 aaKnown RBP12.77□□□□□ -0.37
PDLIM1-205ENST00000493949 NAP1L5Q96NT1 182 aaPredicted RBP12.77□□□□□ -0.37
PDLIM1-205ENST00000493949 UBE2OQ9C0C9 1292 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms