RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	RHBDL3	P58872	404 aa		13.57	□□□□□ -0.24
BRCA1-222	ENST00000493919	SF3A1	Q15459	793 aa	Known RBP	13.57	□□□□□ -0.24
BRCA1-222	ENST00000493919	C15orf52	Q6ZUT6	534 aa	Known RBP	13.57	□□□□□ -0.24
BRCA1-222	ENST00000493919	KLHL23	Q8NBE8	558 aa		13.57	□□□□□ -0.24
BRCA1-222	ENST00000493919	NEUROD6	Q96NK8	337 aa		13.57	□□□□□ -0.24
BRCA1-222	ENST00000493919	OGFR	Q9NZT2	677 aa		13.57	□□□□□ -0.24
BRCA1-222	ENST00000493919	AKAP2	Q9Y2D5	859 aa		13.57	□□□□□ -0.24
BRCA1-222	ENST00000493919	PCDHB15	Q9Y5E8	787 aa		13.57	□□□□□ -0.24
BRCA1-222	ENST00000493919	SYNRG	Q9UMZ2	1314 aa		13.57	□□□□□ -0.24
BRCA1-222	ENST00000493919	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	4e-8	■■■□□ 16.5
BRCA1-222	ENST00000493919	BCAM	P50895	628 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	LONRF3	Q496Y0	759 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	FAM84B	Q96KN1	310 aa	Predicted RBP	13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	PPP1R9B	Q96SB3	815 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	MYH13	Q9UKX3	1938 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	USP17L3	A6NCW0	530 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	USP17L4	A6NCW7	530 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	GOLGA6L6	A8MZA4	724 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	GOLGA6L22	H0YM25	854 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	LMOD1	P29536	600 aa	Predicted RBP	13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	ADORA1	P30542	326 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	GMPS	P49915	693 aa	Predicted RBP	13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	TIMM10	P62072	90 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	GTF2I	P78347	998 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	USP17L1	Q7RTZ2	530 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	ERC1	Q8IUD2	1116 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	FAM184A	Q8NB25	1140 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	PPME1	Q9Y570	386 aa		13.56	□□□□□ -0.24
BRCA1-222	ENST00000493919	ZNF646	O15015	1829 aa	Predicted RBP	13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	CCP110	O43303	1012 aa		13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	EPB41L2	O43491	1005 aa	Known RBP	13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	EIF3J	O75822	258 aa	Known RBP	13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	SCNN1D	P51172	638 aa		13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	GOLGA6L1	Q8N7Z2	621 aa		13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	ACRBP	Q8NEB7	543 aa		13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	MYRIP	Q8NFW9	859 aa		13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	MXD3	Q9BW11	206 aa		13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	IL1RAPL2	Q9NP60	686 aa		13.55	□□□□□ -0.24
BRCA1-222	ENST00000493919	IQCA1L	A6NCM1	817 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	MARCH6	O60337	910 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	IL1R1	P14778	569 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	HMGN5	P82970	282 aa	Known RBP	13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	CHAF1A	Q13111	956 aa	Predicted RBP	13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	TNNI3K	Q59H18	835 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	DNAJC21	Q5F1R6	531 aa	Known RBP	13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	TTLL5	Q6EMB2	1281 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	XAGE2	Q96GT9	111 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	FPGT-TNNI3K	V9GXZ4	949 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	SCN4A	P35499	1836 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	SLFN14	P0C7P3	912 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	VEGFA	P15692	232 aa	Predicted RBP	13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	PHKA1	P46020	1223 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	ZSCAN26	Q16670	478 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	PUS10	Q3MIT2	529 aa	Known RBP	13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	HSP90B2P	Q58FF3	399 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	JAKMIP3	Q5VZ66	844 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	FBXO33	Q7Z6M2	555 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	RBM27	Q9P2N5	1060 aa	Known RBP	13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	ABCF2	Q9UG63	623 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	HACL1	Q9UJ83	578 aa		13.54	□□□□□ -0.24
BRCA1-222	ENST00000493919	DACT2	Q5SW24	774 aa		13.53	□□□□□ -0.24
BRCA1-222	ENST00000493919	STRIP1	Q5VSL9	837 aa		13.53	□□□□□ -0.24
BRCA1-222	ENST00000493919	TDRD7	Q8NHU6	1098 aa	Known RBP	13.53	□□□□□ -0.24
BRCA1-222	ENST00000493919	RHPN1	Q8TCX5	695 aa		13.53	□□□□□ -0.24
BRCA1-222	ENST00000493919	KIF1BP	Q96EK5	621 aa		13.53	□□□□□ -0.24
BRCA1-222	ENST00000493919	PRIMPOL	Q96LW4	560 aa		13.53	□□□□□ -0.24
BRCA1-222	ENST00000493919	SHTN1	A0MZ66	631 aa		13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	VIL1	P09327	827 aa	Known RBP	13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	PEX19	P40855	299 aa		13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	EPS15	P42566	896 aa		13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	MAGEA8	P43361	318 aa		13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	EAPP	Q56P03	285 aa	Predicted RBP	13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	CCDC102B	Q68D86	513 aa		13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	MICALL2	Q8IY33	904 aa		13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	GNL3L	Q9NVN8	582 aa	Known RBP	13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	GPRC5D	Q9NZD1	345 aa		13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	COL1A1	P02452	1464 aa	Predicted RBP	13.52	□□□□□ -0.24
BRCA1-222	ENST00000493919	POTEC	B2RU33	542 aa		13.52	□□□□□ -0.25
BRCA1-222	ENST00000493919	EPHX2	P34913	555 aa		13.52	□□□□□ -0.25
BRCA1-222	ENST00000493919	AACS	Q86V21	672 aa		13.52	□□□□□ -0.25
BRCA1-222	ENST00000493919	DBNDD2	Q9BQY9	259 aa		13.52	□□□□□ -0.25
BRCA1-222	ENST00000493919	UBA5	Q9GZZ9	404 aa		13.52	□□□□□ -0.25
BRCA1-222	ENST00000493919	MAF1	Q9H063	256 aa		13.52	□□□□□ -0.25
BRCA1-222	ENST00000493919	GPR108	Q9NPR9	543 aa		13.52	□□□□□ -0.25
BRCA1-222	ENST00000493919	TLR7	Q9NYK1	1049 aa	Known RBP	13.52	□□□□□ -0.25
BRCA1-222	ENST00000493919		F8W031	263 aa	Predicted RBP	13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	RAB11FIP3	O75154	756 aa		13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	RPS12	P25398	132 aa	Known RBP	13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	KIAA0825	Q8IV33	1275 aa		13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	CLASRP	Q8N2M8	674 aa	Known RBP	13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	LSM14A	Q8ND56	463 aa	Known RBP	13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	KCNV2	Q8TDN2	545 aa		13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	MYO3B	Q8WXR4	1341 aa		13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	TNPO1	Q92973	898 aa	Known RBP	13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	EAF2	Q96CJ1	260 aa	Predicted RBP	13.51	□□□□□ -0.25
BRCA1-222	ENST00000493919	LRRCC1	Q9C099	1032 aa		13.51	□□□□□ -0.25

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