RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 COPRSQ9NQ92 184 aa9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 CPA4Q9UI42 421 aa9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 LRRFIP2Q9Y608 721 aaKnown RBP9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 ADGRA2Q96PE1 1338 aa9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 RFX7Q2KHR2 1363 aa9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 CXCL11O14625 94 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 GAKO14976 1311 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 ENTPD3O75355 529 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 MYCP01106 439 aaPredicted RBP9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 HOXD10P28358 340 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 PSMC4P43686 418 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 RGS3P49796 1198 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 PDS5AQ29RF7 1337 aaKnown RBP9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 ATRNL1Q5VV63 1379 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 CCDC102BQ68D86 513 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 DZIP1Q86YF9 867 aaKnown RBP9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 SLF2Q8IX21 1173 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 PARK7Q99497 189 aaKnown RBP9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 IDI2Q9BXS1 227 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 SRRDQ9UH36 339 aa9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 PA2G4Q9UQ80 394 aaKnown RBP9.69□□□□□ -0.86
SEMA3F-209ENST00000493743 MYPNQ86TC9 1320 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 PHF20L1A8MW92 1017 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 ECM2O94769 699 aaPredicted RBP9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 FMNL1O95466 1100 aaPredicted RBP9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 OSBPP22059 807 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 CTGFP29279 349 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 ADORA1P30542 326 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 MOGSQ13724 837 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 ERICH6BQ5W0A0 696 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 ZSCAN29Q8IWY8 852 aaPredicted RBP9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 ZFPM1Q8IX07 1006 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 SCYL3Q8IZE3 742 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 RAET1EQ8TD07 263 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 MEIS3Q99687 375 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 PICK1Q9NRD5 415 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 ABCF2Q9UG63 623 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 SIPA1L1O43166 1804 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 BRCA2P51587 3418 aa9.68□□□□□ -0.86
SEMA3F-209ENST00000493743 MKI67P46013 3256 aaKnown RBP9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 MROH7-TTC4A0A0A0MT08 1334 aa9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 A0A1B0GUL7 405 aa9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 GNAI3P08754 354 aa9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 BCRP11274 1271 aa9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 RASGRF1Q13972 1273 aa9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 SPTY2D1Q68D10 685 aaPredicted RBP9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 GPAT2Q6NUI2 795 aa9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 FASTKD5Q7L8L6 764 aaKnown RBP9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 FAM163AQ96GL9 167 aaPredicted RBP9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 AKAP2Q9Y2D5 859 aa9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 ZHX2Q9Y6X8 837 aa9.67□□□□□ -0.86
SEMA3F-209ENST00000493743 MYH1P12882 1939 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 A0A0G2JLL6 359 aaPredicted RBP9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 SRGAP3O43295 1099 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 CYP2C8P10632 490 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 PTPRAP18433 802 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 GRK4P32298 578 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 BTDP43251 543 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 FCGRTP55899 365 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 TIMM10P62072 90 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 MAP3K10Q02779 954 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 PICALMQ13492 652 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 MTX1Q13505 466 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 MVPQ14764 893 aaKnown RBP9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 MTFR1Q15390 333 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 GADL1Q6ZQY3 521 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 SH3BP5LQ7L8J4 393 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 PRRT2Q7Z6L0 340 aaPredicted RBP9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 NKX2-3Q8TAU0 364 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 ARHGAP45Q92619 1136 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 XAGE2Q96GT9 111 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 SLC45A1Q9Y2W3 748 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 AFG3L2Q9Y4W6 797 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 ALPK3Q96L96 1907 aa9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 COL2A1P02458 1487 aaPredicted RBP9.66□□□□□ -0.86
SEMA3F-209ENST00000493743 DDTLA6NHG4 134 aaPredicted RBP9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 CTNND1O60716 968 aaKnown RBP9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 UBXN2AP68543 259 aa9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 PRKCZQ05513 592 aa9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 TFCP2Q12800 502 aa9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 SLAIN1Q8ND83 568 aa9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 SHISA4Q96DD7 197 aa9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 DDX4Q9NQI0 724 aaKnown RBP9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 BIN2Q9UBW5 565 aaPredicted RBP9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 PLXNB2O15031 1838 aa9.65□□□□□ -0.86
SEMA3F-209ENST00000493743 GPR75-ASB3A0A0A6YYF3 556 aa9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 TRIM75PA6NK02 468 aa9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 H0YGN5 161 aa9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 TBC1D12O60347 775 aa9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 NPM3O75607 178 aaKnown RBP9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 MAP4K4O95819 1239 aaPredicted RBP9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 LDHCP07864 332 aa9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 GJB1P08034 283 aa9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 CCL5P13501 91 aa9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 GJA8P48165 433 aa9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 FXR1P51114 621 aaKnown RBP eCLIP9.64□□□□□ -0.87
SEMA3F-209ENST00000493743 RHBDL3P58872 404 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms