RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 SLC4A8Q2Y0W8 1093 aa12.71□□□□□ -0.37
NUDCD3-210ENST00000493613 SPTY2D1Q68D10 685 aaPredicted RBP12.71□□□□□ -0.37
NUDCD3-210ENST00000493613 ZSCAN29Q8IWY8 852 aaPredicted RBP12.71□□□□□ -0.37
NUDCD3-210ENST00000493613 SH3TC2Q8TF17 1288 aa12.71□□□□□ -0.37
NUDCD3-210ENST00000493613 GCC1Q96CN9 775 aa12.71□□□□□ -0.37
NUDCD3-210ENST00000493613 XAGE2Q96GT9 111 aa12.71□□□□□ -0.37
NUDCD3-210ENST00000493613 MROH7-TTC4A0A0A0MT08 1334 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 ADGRA2Q96PE1 1338 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 BTDP43251 543 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 PICALMQ13492 652 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 MOGSQ13724 837 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 SCYL3Q8IZE3 742 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 NEUROD6Q96NK8 337 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 PICK1Q9NRD5 415 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 MYH1P12882 1939 aa12.7□□□□□ -0.38
NUDCD3-210ENST00000493613 DOCK3Q8IZD9 2030 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 CXCL11O14625 94 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 IPO8O15397 1037 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 TRIM27P14373 513 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 CTGFP29279 349 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 PSMC4P43686 418 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 MECOMQ03112 1051 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 FRAT1Q92837 279 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 TRIM47Q96LD4 638 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 PARK7Q99497 189 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 DDX4Q9NQI0 724 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 ZHX2Q9Y6X8 837 aa12.69□□□□□ -0.38
NUDCD3-210ENST00000493613 DDTLA6NHG4 134 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 FMNL1O95466 1100 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 GNAI2P04899 355 aa12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 CYP2C8P10632 490 aa12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 PTPRAP18433 802 aa12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 MAP3K10Q02779 954 aa12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 GPAT2Q6NUI2 795 aa12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 ATF7IPQ6VMQ6 1270 aa12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 FASTKD5Q7L8L6 764 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 HMG20BQ9P0W2 317 aa12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 SRRDQ9UH36 339 aa12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 TNNQ9UQP3 1299 aa12.68□□□□□ -0.38
NUDCD3-210ENST00000493613 MYPNQ86TC9 1320 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 COL2A1P02458 1487 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 GPR75-ASB3A0A0A6YYF3 556 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 A0A0G2JLL6 359 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 BCAR3O75815 825 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 OSBPP22059 807 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 HOXD10P28358 340 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 GADL1Q6ZQY3 521 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 PRRT2Q7Z6L0 340 aaPredicted RBP12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 RAET1EQ8TD07 263 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 ZNF384Q8TF68 577 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 CLUAP1Q96AJ1 413 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 AFG3L2Q9Y4W6 797 aa12.67□□□□□ -0.38
NUDCD3-210ENST00000493613 CEP290O15078 2479 aa12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 PNMA6EA0A0J9YXQ4 647 aa12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 CTNND1O60716 968 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 LDHCP07864 332 aa12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 BCRP11274 1271 aa12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 ARID4AP29374 1257 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 GRK4P32298 578 aa12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 RHBDL3P58872 404 aa12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 GSTO1P78417 241 aa12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 G3BP1Q13283 466 aaKnown RBP eCLIP12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 TBC1D9Q6ZT07 1266 aa12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 NSUN4Q96CB9 384 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-210ENST00000493613 PLXNB2O15031 1838 aa12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 TRIM75PA6NK02 468 aa12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 MCAMP43121 646 aa12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 FCGRTP55899 365 aa12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 MTFR1Q15390 333 aa12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 HABP4Q5JVS0 413 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 RAI14Q9P0K7 980 aa12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 SLC45A1Q9Y2W3 748 aa12.65□□□□□ -0.38
NUDCD3-210ENST00000493613 MYH8P13535 1937 aa12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 TBC1D12O60347 775 aa12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 MAP4K4O95819 1239 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 PRKCZQ05513 592 aa12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 ALPK3Q96L96 1907 aa12.64□□□□□ -0.39
NUDCD3-210ENST00000493613 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
NUDCD3-210ENST00000493613 CCL5P13501 91 aa12.63□□□□□ -0.39
NUDCD3-210ENST00000493613 ZKSCAN2Q63HK3 967 aa12.63□□□□□ -0.39
NUDCD3-210ENST00000493613 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
NUDCD3-210ENST00000493613 SHISA4Q96DD7 197 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms