RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 DIXDC1Q155Q3 683 aa16.71■□□□□ 0.27
TRIM50-204ENST00000493498 SPTY2D1Q68D10 685 aaPredicted RBP16.71■□□□□ 0.27
TRIM50-204ENST00000493498 COPRSQ9NQ92 184 aa16.71■□□□□ 0.27
TRIM50-204ENST00000493498 CEP290O15078 2479 aa16.7■□□□□ 0.26
TRIM50-204ENST00000493498 HABP4Q5JVS0 413 aaKnown RBP16.7■□□□□ 0.26
TRIM50-204ENST00000493498 FASTKD5Q7L8L6 764 aaKnown RBP16.7■□□□□ 0.26
TRIM50-204ENST00000493498 NKX2-3Q8TAU0 364 aa16.7■□□□□ 0.26
TRIM50-204ENST00000493498 IDI2Q9BXS1 227 aa16.7■□□□□ 0.26
TRIM50-204ENST00000493498 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
TRIM50-204ENST00000493498 PSMC4P43686 418 aa16.69■□□□□ 0.26
TRIM50-204ENST00000493498 NFIAQ12857 509 aa16.69■□□□□ 0.26
TRIM50-204ENST00000493498 DZIP1Q86YF9 867 aaKnown RBP16.69■□□□□ 0.26
TRIM50-204ENST00000493498 CCDC136Q96JN2 1154 aa16.69■□□□□ 0.26
TRIM50-204ENST00000493498 ARHGAP39Q9C0H5 1083 aa16.69■□□□□ 0.26
TRIM50-204ENST00000493498 PICK1Q9NRD5 415 aa16.69■□□□□ 0.26
TRIM50-204ENST00000493498 FAM198AQ9UFP1 575 aa16.69■□□□□ 0.26
TRIM50-204ENST00000493498 SRRDQ9UH36 339 aa16.69■□□□□ 0.26
TRIM50-204ENST00000493498 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
TRIM50-204ENST00000493498 MKI67P46013 3256 aaKnown RBP16.69■□□□□ 0.26
TRIM50-204ENST00000493498 GAKO14976 1311 aa16.69■□□□□ 0.26
TRIM50-204ENST00000493498 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
TRIM50-204ENST00000493498 GNAI3P08754 354 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 PHKA1P46020 1223 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 CCDC102BQ68D86 513 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 SCYL3Q8IZE3 742 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 RAET1EQ8TD07 263 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 SH3TC2Q8TF17 1288 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 FAM163AQ96GL9 167 aaPredicted RBP16.68■□□□□ 0.26
TRIM50-204ENST00000493498 TRIM47Q96LD4 638 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 CPA4Q9UI42 421 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 ZSWIM8A7E2V4 1837 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 ADGRA2Q96PE1 1338 aa16.68■□□□□ 0.26
TRIM50-204ENST00000493498 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
TRIM50-204ENST00000493498 CAPN2P17655 700 aa16.67■□□□□ 0.26
TRIM50-204ENST00000493498 RGS3P49796 1198 aa16.67■□□□□ 0.26
TRIM50-204ENST00000493498 FCGRTP55899 365 aa16.67■□□□□ 0.26
TRIM50-204ENST00000493498 ZSCAN29Q8IWY8 852 aaPredicted RBP16.67■□□□□ 0.26
TRIM50-204ENST00000493498 SLC45A1Q9Y2W3 748 aa16.67■□□□□ 0.26
TRIM50-204ENST00000493498 MGAMO43451 1857 aa16.67■□□□□ 0.26
TRIM50-204ENST00000493498 MYPNQ86TC9 1320 aa16.67■□□□□ 0.26
TRIM50-204ENST00000493498 OSBPP22059 807 aa16.66■□□□□ 0.26
TRIM50-204ENST00000493498 GRK4P32298 578 aa16.66■□□□□ 0.26
TRIM50-204ENST00000493498 UBXN2AP68543 259 aa16.66■□□□□ 0.26
TRIM50-204ENST00000493498 ATRNL1Q5VV63 1379 aa16.65■□□□□ 0.26
TRIM50-204ENST00000493498 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
TRIM50-204ENST00000493498 A0A0G2JLL6 359 aaPredicted RBP16.65■□□□□ 0.26
TRIM50-204ENST00000493498 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
TRIM50-204ENST00000493498 MAP3K10Q02779 954 aa16.65■□□□□ 0.26
TRIM50-204ENST00000493498 MOGSQ13724 837 aa16.65■□□□□ 0.26
TRIM50-204ENST00000493498 PRRT2Q7Z6L0 340 aaPredicted RBP16.65■□□□□ 0.26
TRIM50-204ENST00000493498 ABCF2Q9UG63 623 aa16.65■□□□□ 0.26
TRIM50-204ENST00000493498 ZHX2Q9Y6X8 837 aa16.65■□□□□ 0.26
TRIM50-204ENST00000493498 PTPRFP10586 1907 aa16.64■□□□□ 0.26
TRIM50-204ENST00000493498 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.26
TRIM50-204ENST00000493498 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
TRIM50-204ENST00000493498 CTNND1O60716 968 aaKnown RBP16.64■□□□□ 0.25
TRIM50-204ENST00000493498 MYCP01106 439 aaPredicted RBP16.64■□□□□ 0.25
TRIM50-204ENST00000493498 LDHCP07864 332 aa16.64■□□□□ 0.25
TRIM50-204ENST00000493498 BCRP11274 1271 aa16.64■□□□□ 0.25
TRIM50-204ENST00000493498 GSTO1P78417 241 aa16.64■□□□□ 0.25
TRIM50-204ENST00000493498 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
TRIM50-204ENST00000493498 RASGRF1Q13972 1273 aa16.64■□□□□ 0.25
TRIM50-204ENST00000493498 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.25
TRIM50-204ENST00000493498 SLAIN1Q8ND83 568 aa16.64■□□□□ 0.25
TRIM50-204ENST00000493498 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
TRIM50-204ENST00000493498 MROH7-TTC4A0A0A0MT08 1334 aa16.64■□□□□ 0.25
TRIM50-204ENST00000493498 A0A1B0GUL7 405 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 SRGAP3O43295 1099 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 GJB1P08034 283 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 PTPRAP18433 802 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 ADORA1P30542 326 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 BTDP43251 543 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 MTX1Q13505 466 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 GPAT2Q6NUI2 795 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 RPAP2Q8IXW5 612 aaPredicted RBP16.63■□□□□ 0.25
TRIM50-204ENST00000493498 MEIS3Q99687 375 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 RWDD1Q9H446 243 aaPredicted RBP16.63■□□□□ 0.25
TRIM50-204ENST00000493498 BIN2Q9UBW5 565 aaPredicted RBP16.63■□□□□ 0.25
TRIM50-204ENST00000493498 AFG3L2Q9Y4W6 797 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 BRCA2P51587 3418 aa16.63■□□□□ 0.25
TRIM50-204ENST00000493498 TBC1D12O60347 775 aa16.62■□□□□ 0.25
TRIM50-204ENST00000493498 CTGFP29279 349 aa16.62■□□□□ 0.25
TRIM50-204ENST00000493498 GJA8P48165 433 aa16.62■□□□□ 0.25
TRIM50-204ENST00000493498 TIMM10P62072 90 aa16.62■□□□□ 0.25
TRIM50-204ENST00000493498 CENPQQ7L2Z9 268 aaPredicted RBP16.62■□□□□ 0.25
TRIM50-204ENST00000493498 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
TRIM50-204ENST00000493498 HTATIP2Q9BUP3 242 aa16.62■□□□□ 0.25
TRIM50-204ENST00000493498 PNMA3Q9UL41 463 aa16.62■□□□□ 0.25
TRIM50-204ENST00000493498 PCDHB15Q9Y5E8 787 aa16.62■□□□□ 0.25
TRIM50-204ENST00000493498 COL2A1P02458 1487 aaPredicted RBP16.61■□□□□ 0.25
TRIM50-204ENST00000493498 GPR75-ASB3A0A0A6YYF3 556 aa16.61■□□□□ 0.25
TRIM50-204ENST00000493498 GORABQ5T7V8 394 aa16.61■□□□□ 0.25
TRIM50-204ENST00000493498 GADL1Q6ZQY3 521 aa16.61■□□□□ 0.25
TRIM50-204ENST00000493498 SMCR8Q8TEV9 937 aaPredicted RBP16.61■□□□□ 0.25
TRIM50-204ENST00000493498 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
TRIM50-204ENST00000493498 GNAI2P04899 355 aa16.6■□□□□ 0.25
TRIM50-204ENST00000493498 CYP2C8P10632 490 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms