RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 FAM84BQ96KN1 310 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF9-203ENST00000492571 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
TNFRSF9-203ENST00000492571 IL16Q14005 1332 aa12.29□□□□□ -0.44
TNFRSF9-203ENST00000492571 IRF6O14896 467 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 PSMC4P43686 418 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 CAP1Q01518 475 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 PPATQ06203 517 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 CHAF1AQ13111 956 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 PPIL2Q13356 520 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 PPP4R3BQ5MIZ7 849 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 FAM83AQ86UY5 434 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 SRRDQ9UH36 339 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 MAST3O60307 1309 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 AOX1Q06278 1338 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 MROH5Q6ZUA9 1318 aa12.28□□□□□ -0.44
TNFRSF9-203ENST00000492571 GRK4P32298 578 aa12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 BEND3Q5T5X7 828 aa12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 FKBP1CQ5VVH2 108 aa12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 SLC17A8Q8NDX2 589 aa12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 ZKSCAN4Q969J2 545 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 MRIQ9BWK5 157 aa12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 ZNF341Q9BYN7 854 aa12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 ARHGAP39Q9C0H5 1083 aa12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 RNF208Q9H0X6 261 aa12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 BRCA2P51587 3418 aa12.27□□□□□ -0.45
TNFRSF9-203ENST00000492571 F6X3S4 739 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 PDHXO00330 501 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 GJB1P08034 283 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 CAPN2P17655 700 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 GJA8P48165 433 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 C17orf99Q6UX52 265 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 ANKRD23Q86SG2 305 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 ZDHHC15Q96MV8 337 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 RBM27Q9P2N5 1060 aaKnown RBP12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 CPA4Q9UI42 421 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 SUGT1Q9Y2Z0 365 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 SNCAIPQ9Y6H5 919 aa12.26□□□□□ -0.45
TNFRSF9-203ENST00000492571 MYH3P11055 1940 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 VAMP4O75379 141 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 ALDH1L1O75891 902 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 CACNB3P54284 484 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 FCGRTP55899 365 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 MTFR1Q15390 333 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 METTL24Q5JXM2 366 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 MIGA2Q7L4E1 593 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 PARK7Q99497 189 aaKnown RBP12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 SRCIN1Q9C0H9 1055 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 MYPNQ86TC9 1320 aa12.25□□□□□ -0.45
TNFRSF9-203ENST00000492571 DLL1O00548 723 aa12.24□□□□□ -0.45
TNFRSF9-203ENST00000492571 CCL5P13501 91 aa12.24□□□□□ -0.45
TNFRSF9-203ENST00000492571 OSBPP22059 807 aa12.24□□□□□ -0.45
TNFRSF9-203ENST00000492571 MFSD10Q14728 455 aa12.24□□□□□ -0.45
TNFRSF9-203ENST00000492571 EPHA10Q5JZY3 1008 aa12.24□□□□□ -0.45
TNFRSF9-203ENST00000492571 FBXO33Q7Z6M2 555 aa12.24□□□□□ -0.45
TNFRSF9-203ENST00000492571 DDX27Q96GQ7 796 aaKnown RBP12.24□□□□□ -0.45
TNFRSF9-203ENST00000492571 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
TNFRSF9-203ENST00000492571 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 HRO43593 1189 aa12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 EVI5O60447 810 aa12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 IFIT1P09914 478 aaKnown RBP12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 EXOSC9Q06265 439 aaKnown RBP12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 HHIPL2Q6UWX4 724 aa12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 WDR63Q8IWG1 891 aa12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 FAM151AQ8WW52 585 aa12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 PUS3Q9BZE2 481 aaKnown RBP12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 RBBP6Q7Z6E9 1792 aaKnown RBP12.23□□□□□ -0.45
TNFRSF9-203ENST00000492571 A0A1W2PPC1 479 aa12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 TK2O00142 265 aa12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 CXCL11O14625 94 aa12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 FARP2O94887 1054 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 PDE8BO95263 885 aa12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 TFRCP02786 760 aaKnown RBP12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 BCAMP50895 628 aa12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 APOBEC3HQ6NTF7 200 aaKnown RBP12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 FASTKD5Q7L8L6 764 aaKnown RBP12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 ZNF454Q8N9F8 522 aa12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 WDR66Q8TBY9 1149 aa12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 U2AF1L4Q8WU68 220 aaKnown RBP12.22□□□□□ -0.45
TNFRSF9-203ENST00000492571 ZNF646O15015 1829 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF9-203ENST00000492571 SGPL1O95470 568 aa12.21□□□□□ -0.45
TNFRSF9-203ENST00000492571 INPP5BP32019 993 aa12.21□□□□□ -0.45
TNFRSF9-203ENST00000492571 GRIK5Q16478 980 aa12.21□□□□□ -0.45
TNFRSF9-203ENST00000492571 SHISA4Q96DD7 197 aa12.21□□□□□ -0.45
TNFRSF9-203ENST00000492571 KCNK17Q96T54 332 aa12.21□□□□□ -0.45
TNFRSF9-203ENST00000492571 PICK1Q9NRD5 415 aa12.21□□□□□ -0.45
TNFRSF9-203ENST00000492571 KCNH4Q9UQ05 1017 aa12.21□□□□□ -0.45
TNFRSF9-203ENST00000492571 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF9-203ENST00000492571 ADCY3O60266 1144 aa12.2□□□□□ -0.46
TNFRSF9-203ENST00000492571 FOSBP53539 338 aa12.2□□□□□ -0.46
TNFRSF9-203ENST00000492571 PRKCZQ05513 592 aa12.2□□□□□ -0.46
TNFRSF9-203ENST00000492571 TCP10Q12799 353 aa12.2□□□□□ -0.46
TNFRSF9-203ENST00000492571 PUM3Q15397 648 aaKnown RBP12.2□□□□□ -0.46
TNFRSF9-203ENST00000492571 SUCLG2Q96I99 432 aa12.2□□□□□ -0.46
TNFRSF9-203ENST00000492571 EMILIN3Q9NT22 766 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms