RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 WRNIP1Q96S55 665 aa22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 ZNF341Q9BYN7 854 aa22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 AATFQ9NY61 560 aaKnown RBP eCLIP22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 CSADQ9Y600 493 aa22.59■■□□□ 1.21
NDUFB4-204ENST00000491335 DDTLA6NHG4 134 aaPredicted RBP22.58■■□□□ 1.21
NDUFB4-204ENST00000491335 NPM3O75607 178 aaKnown RBP22.58■■□□□ 1.21
NDUFB4-204ENST00000491335 BAG3O95817 575 aa22.58■■□□□ 1.21
NDUFB4-204ENST00000491335 ZBTB48P10074 688 aaPredicted RBP22.58■■□□□ 1.21
NDUFB4-204ENST00000491335 MAP3K12Q12852 859 aa22.58■■□□□ 1.21
NDUFB4-204ENST00000491335 TEX11Q8IYF3 940 aa22.58■■□□□ 1.21
NDUFB4-204ENST00000491335 DNAJC2Q99543 621 aaKnown RBP22.58■■□□□ 1.21
NDUFB4-204ENST00000491335 BOLA2Q9H3K6 86 aa22.58■■□□□ 1.21
NDUFB4-204ENST00000491335 DOCK2Q92608 1830 aa22.58■■□□□ 1.21
NDUFB4-204ENST00000491335 ATP5JP18859 108 aa22.57■■□□□ 1.2
NDUFB4-204ENST00000491335 TTF1Q15361 905 aaPredicted RBP22.57■■□□□ 1.2
NDUFB4-204ENST00000491335 MAGEB6Q8N7X4 407 aa22.57■■□□□ 1.2
NDUFB4-204ENST00000491335 CNKSR2Q8WXI2 1034 aa22.57■■□□□ 1.2
NDUFB4-204ENST00000491335 ZKSCAN4Q969J2 545 aaPredicted RBP22.57■■□□□ 1.2
NDUFB4-204ENST00000491335 OPTNQ96CV9 577 aa22.57■■□□□ 1.2
NDUFB4-204ENST00000491335 SAGE1Q9NXZ1 904 aa22.57■■□□□ 1.2
NDUFB4-204ENST00000491335 SUPT16HQ9Y5B9 1047 aaKnown RBP22.57■■□□□ 1.2
NDUFB4-204ENST00000491335 CASP8AP2Q9UKL3 1982 aa22.57■■□□□ 1.2
NDUFB4-204ENST00000491335 MANSC4A6NHS7 340 aaPredicted RBP22.56■■□□□ 1.2
NDUFB4-204ENST00000491335 GOLIM4O00461 696 aa22.56■■□□□ 1.2
NDUFB4-204ENST00000491335 INPP5BP32019 993 aa22.56■■□□□ 1.2
NDUFB4-204ENST00000491335 SREBF2Q12772 1141 aa22.56■■□□□ 1.2
NDUFB4-204ENST00000491335 EDC3Q96F86 508 aaKnown RBP22.56■■□□□ 1.2
NDUFB4-204ENST00000491335 ZNF112Q9UJU3 913 aa22.56■■□□□ 1.2
NDUFB4-204ENST00000491335 SNCAIPQ9Y6H5 919 aa22.56■■□□□ 1.2
NDUFB4-204ENST00000491335 PLCG2P16885 1265 aa22.55■■□□□ 1.2
NDUFB4-204ENST00000491335 DYNLL1P63167 89 aaKnown RBP22.55■■□□□ 1.2
NDUFB4-204ENST00000491335 ATRNL1Q5VV63 1379 aa22.54■■□□□ 1.2
NDUFB4-204ENST00000491335 CDK5RAP2Q96SN8 1893 aa22.54■■□□□ 1.2
NDUFB4-204ENST00000491335 SLURP2P0DP57 97 aa22.54■■□□□ 1.2
NDUFB4-204ENST00000491335 INHBEP58166 350 aa22.54■■□□□ 1.2
NDUFB4-204ENST00000491335 HAUS7Q99871 368 aa22.54■■□□□ 1.2
NDUFB4-204ENST00000491335 OSBPL5Q9H0X9 879 aaPredicted RBP22.54■■□□□ 1.2
NDUFB4-204ENST00000491335 MAP3K10Q02779 954 aa22.53■■□□□ 1.2
NDUFB4-204ENST00000491335 MIGA1Q8NAN2 632 aa22.53■■□□□ 1.2
NDUFB4-204ENST00000491335 TGFBRAP1Q8WUH2 860 aa22.53■■□□□ 1.2
NDUFB4-204ENST00000491335 PAG1Q9NWQ8 432 aa22.53■■□□□ 1.2
NDUFB4-204ENST00000491335 SPDYE5A6NIY4 337 aa22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 AAMPQ13685 434 aa22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 SLC9C2Q5TAH2 1124 aa22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 TMED8Q6PL24 325 aaPredicted RBP22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 ERO1BQ86YB8 467 aa22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 TNS4Q8IZW8 715 aa22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 EXOC6Q8TAG9 804 aa22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 OTUD5Q96G74 571 aa22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 ECHDC1Q9NTX5 307 aa22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 LAMB1P07942 1786 aa22.52■■□□□ 1.2
NDUFB4-204ENST00000491335 PHF20L1A8MW92 1017 aa22.51■■□□□ 1.19
NDUFB4-204ENST00000491335 TBC1D8O95759 1140 aa22.51■■□□□ 1.19
NDUFB4-204ENST00000491335 PDE6AP16499 860 aa22.51■■□□□ 1.19
NDUFB4-204ENST00000491335 IFNL1Q8IU54 200 aa22.51■■□□□ 1.19
NDUFB4-204ENST00000491335 MAPKAPK5Q8IW41 473 aa22.51■■□□□ 1.19
NDUFB4-204ENST00000491335 MS4A4AQ96JQ5 239 aa22.51■■□□□ 1.19
NDUFB4-204ENST00000491335 FOCADQ5VW36 1801 aa22.5■■□□□ 1.19
NDUFB4-204ENST00000491335 HDAC1Q13547 482 aaPredicted RBP22.5■■□□□ 1.19
NDUFB4-204ENST00000491335 COL2A1P02458 1487 aaPredicted RBP22.49■■□□□ 1.19
NDUFB4-204ENST00000491335 TESPA1A2RU30 521 aaPredicted RBP22.49■■□□□ 1.19
NDUFB4-204ENST00000491335 IGF2BP3O00425 579 aaKnown RBP eCLIP22.49■■□□□ 1.19
NDUFB4-204ENST00000491335 NOL9Q5SY16 702 aaKnown RBP22.49■■□□□ 1.19
NDUFB4-204ENST00000491335 TSHZ3Q63HK5 1081 aa22.49■■□□□ 1.19
NDUFB4-204ENST00000491335 CERS3Q8IU89 383 aa22.49■■□□□ 1.19
NDUFB4-204ENST00000491335 PTPN18Q99952 460 aa22.49■■□□□ 1.19
NDUFB4-204ENST00000491335 FLT1P17948 1338 aa22.49■■□□□ 1.19
NDUFB4-204ENST00000491335 ZNF532Q9HCE3 1301 aa22.49■■□□□ 1.19
NDUFB4-204ENST00000491335 TCRBV5S4A2TA0A5A2 114 aa22.48■■□□□ 1.19
NDUFB4-204ENST00000491335 FAM196BA6NMK8 535 aa22.48■■□□□ 1.19
NDUFB4-204ENST00000491335 IRF6O14896 467 aa22.48■■□□□ 1.19
NDUFB4-204ENST00000491335 TBC1D12O60347 775 aa22.48■■□□□ 1.19
NDUFB4-204ENST00000491335 GTF2A2P52657 109 aa22.48■■□□□ 1.19
NDUFB4-204ENST00000491335 PPIL2Q13356 520 aa22.48■■□□□ 1.19
NDUFB4-204ENST00000491335 GPATCH3Q96I76 525 aa22.48■■□□□ 1.19
NDUFB4-204ENST00000491335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.48■■□□□ 1.19
NDUFB4-204ENST00000491335 CCL15-CCL14A0A0B4J2E2 113 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 MAGEB6P1A0A0J9YX57 407 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 ALDH1A1P00352 501 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 PPATQ06203 517 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 CCL15Q16663 113 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 SLFNL1Q499Z3 407 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 ANKRD45Q5TZF3 282 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 OTUD7AQ8TE49 926 aaPredicted RBP22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 BRI3BPQ8WY22 251 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 RIOK1Q9BRS2 568 aaKnown RBP22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 DHX36Q9H2U1 1008 aaKnown RBP22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 R3HDMLQ9H3Y0 253 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 SAP30BPQ9UHR5 308 aaKnown RBP22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 PALD1Q9ULE6 856 aa22.47■■□□□ 1.19
NDUFB4-204ENST00000491335 USP5P45974 858 aa22.46■■□□□ 1.19
NDUFB4-204ENST00000491335 OTUD7BQ6GQQ9 843 aa22.46■■□□□ 1.19
NDUFB4-204ENST00000491335 GCC1Q96CN9 775 aa22.46■■□□□ 1.19
NDUFB4-204ENST00000491335 PI4KBQ9UBF8 816 aa22.46■■□□□ 1.19
NDUFB4-204ENST00000491335 MYH1P12882 1939 aa22.46■■□□□ 1.19
NDUFB4-204ENST00000491335 MYH7P12883 1935 aa22.45■■□□□ 1.18
NDUFB4-204ENST00000491335 CTNND1O60716 968 aaKnown RBP22.45■■□□□ 1.18
NDUFB4-204ENST00000491335 ADD2P35612 726 aa22.45■■□□□ 1.18
NDUFB4-204ENST00000491335 SCYL3Q8IZE3 742 aa22.45■■□□□ 1.18
NDUFB4-204ENST00000491335 CFHR5Q9BXR6 569 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms