RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 FAM163AQ96GL9 167 aaPredicted RBP20.58■□□□□ 0.89
SRGAP3-209ENST00000490889 TMEM106CQ9BVX2 250 aa20.58■□□□□ 0.89
SRGAP3-209ENST00000490889 MROH7-TTC4A0A0A0MT08 1334 aa20.57■□□□□ 0.88
SRGAP3-209ENST00000490889 BCAR3O75815 825 aa20.57■□□□□ 0.88
SRGAP3-209ENST00000490889 MAP3K10Q02779 954 aa20.57■□□□□ 0.88
SRGAP3-209ENST00000490889 MECOMQ03112 1051 aa20.57■□□□□ 0.88
SRGAP3-209ENST00000490889 SCYL3Q8IZE3 742 aa20.57■□□□□ 0.88
SRGAP3-209ENST00000490889 TRIM47Q96LD4 638 aa20.57■□□□□ 0.88
SRGAP3-209ENST00000490889 HMG20BQ9P0W2 317 aa20.57■□□□□ 0.88
SRGAP3-209ENST00000490889 AKAP2Q9Y2D5 859 aa20.57■□□□□ 0.88
SRGAP3-209ENST00000490889 PHIPQ8WWQ0 1821 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 PNMA6EA0A0J9YXQ4 647 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 CXCL11O14625 94 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 CYP2C8P10632 490 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 PTPRAP18433 802 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 PSMC4P43686 418 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 RHBDL3P58872 404 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 PICALMQ13492 652 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 MVPQ14764 893 aaKnown RBP20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 SLC4A8Q2Y0W8 1093 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 ATF7IPQ6VMQ6 1270 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 ZSCAN29Q8IWY8 852 aaPredicted RBP20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 NEUROD6Q96NK8 337 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 DOCK1Q14185 1865 aa20.56■□□□□ 0.88
SRGAP3-209ENST00000490889 PTPRFP10586 1907 aa20.55■□□□□ 0.88
SRGAP3-209ENST00000490889 GPR75-ASB3A0A0A6YYF3 556 aa20.55■□□□□ 0.88
SRGAP3-209ENST00000490889 GNRH1P01148 92 aa20.55■□□□□ 0.88
SRGAP3-209ENST00000490889 OSBPP22059 807 aa20.55■□□□□ 0.88
SRGAP3-209ENST00000490889 ERICH6Q7L0X2 663 aa20.55■□□□□ 0.88
SRGAP3-209ENST00000490889 FRAT1Q92837 279 aaPredicted RBP20.55■□□□□ 0.88
SRGAP3-209ENST00000490889 CLUAP1Q96AJ1 413 aa20.55■□□□□ 0.88
SRGAP3-209ENST00000490889 SRRDQ9UH36 339 aa20.55■□□□□ 0.88
SRGAP3-209ENST00000490889 ZHX2Q9Y6X8 837 aa20.55■□□□□ 0.88
SRGAP3-209ENST00000490889 A0A0G2JLL6 359 aaPredicted RBP20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 GNAI2P04899 355 aa20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 BCRP11274 1271 aa20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 PRMT2P55345 433 aa20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 SPTY2D1Q68D10 685 aaPredicted RBP20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 TBC1D9Q6ZT07 1266 aa20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 PRRT2Q7Z6L0 340 aaPredicted RBP20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 CCDC84Q86UT8 332 aaPredicted RBP20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 SLF2Q8IX21 1173 aa20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 AFG3L2Q9Y4W6 797 aa20.54■□□□□ 0.88
SRGAP3-209ENST00000490889 MTFR1Q15390 333 aa20.53■□□□□ 0.88
SRGAP3-209ENST00000490889 SPATA5Q8NB90 893 aa20.53■□□□□ 0.88
SRGAP3-209ENST00000490889 NSUN4Q96CB9 384 aaKnown RBP20.53■□□□□ 0.88
SRGAP3-209ENST00000490889 PARK7Q99497 189 aaKnown RBP20.53■□□□□ 0.88
SRGAP3-209ENST00000490889 PICK1Q9NRD5 415 aa20.53■□□□□ 0.88
SRGAP3-209ENST00000490889 FAM196BA6NMK8 535 aa20.52■□□□□ 0.88
SRGAP3-209ENST00000490889 IPO8O15397 1037 aaKnown RBP20.52■□□□□ 0.88
SRGAP3-209ENST00000490889 FMNL1O95466 1100 aaPredicted RBP20.52■□□□□ 0.88
SRGAP3-209ENST00000490889 ARID4AP29374 1257 aaPredicted RBP20.52■□□□□ 0.88
SRGAP3-209ENST00000490889 MGAMO43451 1857 aa20.52■□□□□ 0.87
SRGAP3-209ENST00000490889 MYPNQ86TC9 1320 aa20.52■□□□□ 0.87
SRGAP3-209ENST00000490889 MCAMP43121 646 aa20.51■□□□□ 0.87
SRGAP3-209ENST00000490889 TMEM57Q8N5G2 664 aa20.51■□□□□ 0.87
SRGAP3-209ENST00000490889 SHISA4Q96DD7 197 aa20.51■□□□□ 0.87
SRGAP3-209ENST00000490889 PCDH10Q9P2E7 1040 aa20.51■□□□□ 0.87
SRGAP3-209ENST00000490889 CTNND1O60716 968 aaKnown RBP20.5■□□□□ 0.87
SRGAP3-209ENST00000490889 PRKCZQ05513 592 aa20.5■□□□□ 0.87
SRGAP3-209ENST00000490889 GADL1Q6ZQY3 521 aa20.5■□□□□ 0.87
SRGAP3-209ENST00000490889 FASTKD5Q7L8L6 764 aaKnown RBP20.5■□□□□ 0.87
SRGAP3-209ENST00000490889 GCC1Q96CN9 775 aa20.5■□□□□ 0.87
SRGAP3-209ENST00000490889 TRIM75PA6NK02 468 aa20.49■□□□□ 0.87
SRGAP3-209ENST00000490889 NPM3O75607 178 aaKnown RBP20.49■□□□□ 0.87
SRGAP3-209ENST00000490889 G3BP1Q13283 466 aaKnown RBP eCLIP20.49■□□□□ 0.87
SRGAP3-209ENST00000490889 HABP4Q5JVS0 413 aaKnown RBP20.49■□□□□ 0.87
SRGAP3-209ENST00000490889 GORABQ5T7V8 394 aa20.49■□□□□ 0.87
SRGAP3-209ENST00000490889 RAET1EQ8TD07 263 aa20.49■□□□□ 0.87
SRGAP3-209ENST00000490889 RAI14Q9P0K7 980 aa20.49■□□□□ 0.87
SRGAP3-209ENST00000490889 GABRQQ9UN88 632 aa20.49■□□□□ 0.87
SRGAP3-209ENST00000490889 TBC1D12O60347 775 aa20.48■□□□□ 0.87
SRGAP3-209ENST00000490889 HOXD10P28358 340 aa20.48■□□□□ 0.87
SRGAP3-209ENST00000490889 GRK4P32298 578 aa20.48■□□□□ 0.87
SRGAP3-209ENST00000490889 OSBPL5Q9H0X9 879 aaPredicted RBP20.48■□□□□ 0.87
SRGAP3-209ENST00000490889 COL2A1P02458 1487 aaPredicted RBP20.48■□□□□ 0.87
SRGAP3-209ENST00000490889 SIPA1L1O43166 1804 aa20.48■□□□□ 0.87
SRGAP3-209ENST00000490889 CEP290O15078 2479 aa20.47■□□□□ 0.87
SRGAP3-209ENST00000490889 MAST2Q6P0Q8 1798 aa20.47■□□□□ 0.87
SRGAP3-209ENST00000490889 FCGRTP55899 365 aa20.47■□□□□ 0.87
SRGAP3-209ENST00000490889 GSTO1P78417 241 aa20.47■□□□□ 0.87
SRGAP3-209ENST00000490889 POLA2Q14181 598 aa20.47■□□□□ 0.87
SRGAP3-209ENST00000490889 RRP1BQ14684 758 aaKnown RBP20.47■□□□□ 0.87
SRGAP3-209ENST00000490889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.47■□□□□ 0.87
SRGAP3-209ENST00000490889 ATAD5Q96QE3 1844 aa20.47■□□□□ 0.87
SRGAP3-209ENST00000490889 LDHCP07864 332 aa20.46■□□□□ 0.87
SRGAP3-209ENST00000490889 TREML2Q5T2D2 321 aa20.46■□□□□ 0.87
SRGAP3-209ENST00000490889 ZKSCAN2Q63HK3 967 aa20.46■□□□□ 0.87
SRGAP3-209ENST00000490889 SH3RF3Q8TEJ3 882 aaPredicted RBP20.46■□□□□ 0.87
SRGAP3-209ENST00000490889 DBNDD2Q9BQY9 259 aa20.46■□□□□ 0.87
SRGAP3-209ENST00000490889 C1orf115Q9H7X2 142 aa20.46■□□□□ 0.87
SRGAP3-209ENST00000490889 SNRKQ9NRH2 765 aa20.46■□□□□ 0.87
SRGAP3-209ENST00000490889 SLC45A1Q9Y2W3 748 aa20.46■□□□□ 0.87
SRGAP3-209ENST00000490889 LOC285556D6RIA3 1793 aa20.45■□□□□ 0.86
SRGAP3-209ENST00000490889 UQCRFS1P1P0C7P4 283 aa20.45■□□□□ 0.86
SRGAP3-209ENST00000490889 CCL5P13501 91 aa20.45■□□□□ 0.86
SRGAP3-209ENST00000490889 TNNI3KQ59H18 835 aa20.45■□□□□ 0.86
SRGAP3-209ENST00000490889 LRP2BPQ9P2M1 347 aa20.45■□□□□ 0.86
SRGAP3-209ENST00000490889 AGTPBP1Q9UPW5 1226 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms