RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 PCNX4Q63HM2 1172 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 FBXL19Q6PCT2 694 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 ADAMTSL4Q6UY14 1074 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 ANKRD24Q8TF21 1146 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 GMLQ99445 158 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 CLEC4MQ9H2X3 399 aaPredicted RBP7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 TMEM39AQ9NV64 488 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 NSFL1CQ9UNZ2 370 aaKnown RBP7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 ZMYM3Q14202 1370 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 SCAF11Q99590 1463 aaKnown RBP7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 ABCC1P33527 1531 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 RTEL1-TNFRSF6BF6WH68 1400 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 SCAPERQ9BY12 1400 aa7.27□□□□□ -1.25
SSX2IP-208ENST00000490476 PPP2R3AQ06190 1150 aa7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 CAMK2GQ13555 558 aaPredicted RBP7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 RPS26P11Q5JNZ5 115 aaPredicted RBP7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 PSAPL1Q6NUJ1 521 aa7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 DPH6Q7L8W6 267 aa7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 GPR161Q8N6U8 529 aaKnown RBP7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 GOLM1Q8NBJ4 401 aa7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 NUDT8Q8WV74 236 aa7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 TNFRSF25Q93038 417 aa7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 EAF1Q96JC9 268 aaPredicted RBP7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 RHOVQ96L33 236 aa7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 GGA1Q9UJY5 639 aa7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 EFR3BQ9Y2G0 817 aa7.26□□□□□ -1.25
SSX2IP-208ENST00000490476 UNC13BO14795 1591 aa7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 STK10O94804 968 aaKnown RBP7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 ARAFP10398 606 aa7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 TFE3P19532 575 aaPredicted RBP7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 NASPP49321 788 aaPredicted RBP7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 FCHSD1Q86WN1 690 aa7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 JARID2Q92833 1246 aaPredicted RBP7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 LPIN3Q9BQK8 851 aa7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 CBX8Q9HC52 389 aa7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 AVENQ9NQS1 362 aaPredicted RBP7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 UBP1Q9NZI7 540 aa7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 SUPT16HQ9Y5B9 1047 aaKnown RBP7.25□□□□□ -1.25
SSX2IP-208ENST00000490476 BRWD3Q6RI45 1802 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 NINLQ9Y2I6 1382 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 TLR3O15455 904 aaKnown RBP7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 RGS9O75916 674 aaPredicted RBP7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 SSBP05455 408 aaKnown RBP eCLIP7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 FGRP09769 529 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 MAP2K3P46734 347 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 LMNB2Q03252 620 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 ZNF423Q2M1K9 1284 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 AGMOQ6ZNB7 445 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 VN1R5Q7Z5H4 357 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 LNPKQ9C0E8 428 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 MBIPQ9NS73 344 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 GINM1Q9NU53 330 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 SOX13Q9UN79 622 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 SAMM50Q9Y512 469 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 PCDHB5Q9Y5E4 795 aa7.24□□□□□ -1.25
SSX2IP-208ENST00000490476 AHDC1Q5TGY3 1603 aaPredicted RBP7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 MAP3K1Q13233 1512 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 ADARB2-AS1A8MUL3 147 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 ALAS2P22557 587 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 CDC27P30260 824 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 CABP4P57796 275 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 APOBRQ0VD83 1088 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 IKBKEQ14164 716 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 RASIP1Q5U651 963 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 ANKLE2Q86XL3 938 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 SULF2Q8IWU5 870 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 RASGRP4Q8TDF6 673 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 CPLX3Q8WVH0 158 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 MRVI1Q9Y6F6 885 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 DIP2AQ14689 1571 aa7.23□□□□□ -1.25
SSX2IP-208ENST00000490476 IGF1RP08069 1367 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 SPHKAPQ2M3C7 1700 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 TIAM1Q13009 1591 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 ELOA3CA0A087WX78 387 aaPredicted RBP7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 ELOA3DA6NLF2 546 aaPredicted RBP7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 B3GALT4O96024 378 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 EPHA1P21709 976 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 GARTP22102 1010 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 NME2P22392 152 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 SEPT6Q14141 434 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 ELOA3BQ3SY89 546 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 TXNDC11Q6PKC3 985 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 BNC2Q6ZN30 1099 aaPredicted RBP7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 ELOA3Q8NG57 546 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 STK35Q8TDR2 534 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 SLC7A3Q8WY07 619 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 NKD1Q969G9 470 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 SEC16BQ96JE7 1060 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 NT5C1AQ9BXI3 368 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 COL25A1Q9BXS0 654 aaPredicted RBP7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 ADAM19Q9H013 955 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 MIR1-1HGQ9H1L0 117 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 ZNF518AQ6AHZ1 1483 aa7.22□□□□□ -1.25
SSX2IP-208ENST00000490476 SMARCA5O60264 1052 aaPredicted RBP7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 GREM1O60565 184 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 F13A1P00488 732 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 ESRRAP11474 423 aaPredicted RBP7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 CRKP46108 304 aa7.21□□□□□ -1.26
SSX2IP-208ENST00000490476 SEZ6Q53EL9 994 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms