RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 SLURP2P0DP57 97 aa17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 HUNKP57058 714 aa17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 FKBP1BP68106 108 aa17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 MAPKAPK5Q8IW41 473 aa17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 EVI5LQ96CN4 794 aa17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 FSD1Q9BTV5 496 aa17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 OSBPL5Q9H0X9 879 aaPredicted RBP17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 MKRN1Q9UHC7 482 aaKnown RBP17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 FOCADQ5VW36 1801 aa17.38■□□□□ 0.37
SRGAP3-208ENST00000490348 UBE2Q2LH0YL09 131 aa17.37■□□□□ 0.37
SRGAP3-208ENST00000490348 USP2O75604 605 aaPredicted RBP17.37■□□□□ 0.37
SRGAP3-208ENST00000490348 MBD4O95243 580 aa17.37■□□□□ 0.37
SRGAP3-208ENST00000490348 GSPT1P15170 499 aaKnown RBP17.37■□□□□ 0.37
SRGAP3-208ENST00000490348 NF2P35240 595 aa17.37■□□□□ 0.37
SRGAP3-208ENST00000490348 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
SRGAP3-208ENST00000490348 ZSCAN25Q6NSZ9 544 aa17.37■□□□□ 0.37
SRGAP3-208ENST00000490348 ARMT1Q9H993 441 aa17.37■□□□□ 0.37
SRGAP3-208ENST00000490348 MAP3K11Q16584 847 aa17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 ANGEL1Q9UNK9 670 aaKnown RBP17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 PRKAB2O43741 272 aa17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 TTLL12Q14166 644 aaPredicted RBP17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 LDLRAD1Q5T700 205 aa17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 MIGA2Q7L4E1 593 aa17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 CERS3Q8IU89 383 aa17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 APPBP2Q92624 585 aa17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 HHIPL1Q96JK4 782 aa17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 CSRNP1Q96S65 589 aa17.36■□□□□ 0.37
SRGAP3-208ENST00000490348 COL2A1P02458 1487 aaPredicted RBP17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 TRIM6-TRIM34B2RNG4 842 aa17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 M0R2C6 588 aa17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 ZFYP08048 801 aaPredicted RBP17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 DEFB115Q30KQ5 88 aa17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 TTC22Q5TAA0 569 aa17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 SDR42E1Q8WUS8 393 aa17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 SEC62Q99442 399 aaKnown RBP17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 PPP4R2Q9NY27 417 aa17.35■□□□□ 0.37
SRGAP3-208ENST00000490348 SIPA1L1O43166 1804 aa17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 PPP1R12BO60237 982 aaPredicted RBP17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 VEGFBP49765 207 aa17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 DDX60LQ5H9U9 1706 aaKnown RBP17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 ZMYM1Q5SVZ6 1142 aa17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 ARMC9Q7Z3E5 817 aa17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 ZSCAN29Q8IWY8 852 aaPredicted RBP17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 RILPL2Q969X0 211 aa17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 CLMNQ96JQ2 1002 aa17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 OTOFQ9HC10 1997 aa17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 SAP30BPQ9UHR5 308 aaKnown RBP17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 PALD1Q9ULE6 856 aa17.34■□□□□ 0.37
SRGAP3-208ENST00000490348 FAM155AB1AL88 458 aaPredicted RBP17.33■□□□□ 0.37
SRGAP3-208ENST00000490348 USP5P45974 858 aa17.33■□□□□ 0.37
SRGAP3-208ENST00000490348 MAP3K10Q02779 954 aa17.33■□□□□ 0.37
SRGAP3-208ENST00000490348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.33■□□□□ 0.37
SRGAP3-208ENST00000490348 AIDAQ96BJ3 306 aa17.33■□□□□ 0.37
SRGAP3-208ENST00000490348 STRBPQ96SI9 672 aaKnown RBP17.33■□□□□ 0.37
SRGAP3-208ENST00000490348 CRNKL1Q9BZJ0 848 aaKnown RBP17.33■□□□□ 0.37
SRGAP3-208ENST00000490348 AK9Q5TCS8 1911 aa17.33■□□□□ 0.36
SRGAP3-208ENST00000490348 EVX2Q03828 476 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 SLC4A8Q2Y0W8 1093 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 RGMBQ6NW40 437 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 DCP1AQ9NPI6 582 aaPredicted RBP17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 FAM196BA6NMK8 535 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 PHF20L1A8MW92 1017 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 GPAA1O43292 621 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 SDSP20132 328 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 IREB2P48200 963 aaKnown RBP17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 LRRFIP1Q32MZ4 808 aaKnown RBP17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 CAPNS2Q96L46 248 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 FAM227BQ96M60 508 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
SRGAP3-208ENST00000490348 A0A0D9SFI3 127 aa17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 ZNF157P51786 506 aaPredicted RBP17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 VGLL4Q14135 290 aa17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 DCAF15Q66K64 600 aa17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 RASAL3Q86YV0 1011 aa17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 HOOK2Q96ED9 719 aa17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 WRNIP1Q96S55 665 aa17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 ZIC5Q96T25 663 aa17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 DNAJC18Q9H819 358 aa17.31■□□□□ 0.36
SRGAP3-208ENST00000490348 NAV1Q8NEY1 1877 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 FOXP2O15409 715 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 SLC10A3P09131 477 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 INPP5BP32019 993 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 GRM1Q13255 1194 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 CCDC129Q6ZRS4 1044 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 PAXIP1Q6ZW49 1069 aaPredicted RBP17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 METTL16Q86W50 562 aaKnown RBP17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 ZKSCAN4Q969J2 545 aaPredicted RBP17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 ZNF341Q9BYN7 854 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 PI4KBQ9UBF8 816 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 SLC4A4Q9Y6R1 1079 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 MYH1P12882 1939 aa17.3■□□□□ 0.36
SRGAP3-208ENST00000490348 GSG1L2A8MUP6 293 aa17.29■□□□□ 0.36
SRGAP3-208ENST00000490348 SMIM22K7EJ46 135 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms