RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 KIRREL1Q96J84 757 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 NSUN3Q9H649 340 aaKnown RBP5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 TUT1Q9H6E5 874 aaKnown RBP5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 ZFYVE28Q9HCC9 887 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 RTEL1Q9NZ71 1219 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 EGFL7Q9UHF1 273 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 TMEM265A0A087WTH1 108 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 LOC100289279A0A1B0GTE1 492 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 EDN3P14138 238 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 GLDCP23378 1020 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 CD96P40200 585 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 SKOR2Q2VWA4 1001 aaPredicted RBP5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 B4GALNT3Q6L9W6 998 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 ARHGAP27Q6ZUM4 889 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 GLYCTKQ8IVS8 523 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 ASAP3Q8TDY4 903 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 DIRC2Q96SL1 478 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 SEMA6CQ9H3T2 930 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 CTNND2Q9UQB3 1225 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 AMOTL2Q9Y2J4 779 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 SOX1O00570 391 aaPredicted RBP5.36□□□□□ -1.55
DEPDC1-204ENST00000489862 VN1R5Q7Z5H4 357 aa5.36□□□□□ -1.55
DEPDC1-204ENST00000489862 BSNDQ8WZ55 320 aa5.36□□□□□ -1.55
DEPDC1-204ENST00000489862 CRELD1Q96HD1 420 aa5.36□□□□□ -1.55
DEPDC1-204ENST00000489862 IRF2BPLQ9H1B7 796 aa5.36□□□□□ -1.55
DEPDC1-204ENST00000489862 BRPF3Q9ULD4 1205 aa5.36□□□□□ -1.55
DEPDC1-204ENST00000489862 METTL12A8MUP2 240 aa5.35□□□□□ -1.55
DEPDC1-204ENST00000489862 ARHGAP4P98171 946 aa5.35□□□□□ -1.55
DEPDC1-204ENST00000489862 WDR26Q9H7D7 661 aa5.35□□□□□ -1.55
DEPDC1-204ENST00000489862 MKNK2Q9HBH9 465 aa5.35□□□□□ -1.55
DEPDC1-204ENST00000489862 PITPNM2Q9BZ72 1349 aa5.35□□□□□ -1.55
DEPDC1-204ENST00000489862 ADH5P11766 374 aa5.34□□□□□ -1.55
DEPDC1-204ENST00000489862 IKBKEQ14164 716 aa5.34□□□□□ -1.55
DEPDC1-204ENST00000489862 USPL1Q5W0Q7 1092 aa5.34□□□□□ -1.55
DEPDC1-204ENST00000489862 TXNDC2Q86VQ3 553 aa5.34□□□□□ -1.55
DEPDC1-204ENST00000489862 BHLHE41Q9C0J9 482 aaPredicted RBP5.34□□□□□ -1.55
DEPDC1-204ENST00000489862 C1GALT1Q9NS00 363 aa5.34□□□□□ -1.55
DEPDC1-204ENST00000489862 ACTL7BQ9Y614 415 aa5.34□□□□□ -1.55
DEPDC1-204ENST00000489862 FYB2Q5VWT5 728 aa5.34□□□□□ -1.56
DEPDC1-204ENST00000489862 EPB41L4BQ9H329 900 aa5.34□□□□□ -1.56
DEPDC1-204ENST00000489862 ACSS3Q9H6R3 686 aa5.34□□□□□ -1.56
DEPDC1-204ENST00000489862 DCP1AQ9NPI6 582 aaPredicted RBP5.34□□□□□ -1.56
DEPDC1-204ENST00000489862 CCDC9Q9Y3X0 531 aaKnown RBP5.34□□□□□ -1.56
DEPDC1-204ENST00000489862 A0A1W2PP55 124 aa5.33□□□□□ -1.56
DEPDC1-204ENST00000489862 IGSF3O75054 1194 aa5.33□□□□□ -1.56
DEPDC1-204ENST00000489862 ESRRAP11474 423 aaPredicted RBP5.33□□□□□ -1.56
DEPDC1-204ENST00000489862 HP1BP3Q5SSJ5 553 aaPredicted RBP5.33□□□□□ -1.56
DEPDC1-204ENST00000489862 GALNT12Q8IXK2 581 aa5.33□□□□□ -1.56
DEPDC1-204ENST00000489862 KCNC2Q96PR1 638 aa5.33□□□□□ -1.56
DEPDC1-204ENST00000489862 ETV2O00321 342 aaPredicted RBP5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 NDUFB5O43674 189 aa5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 PDIA4P13667 645 aaKnown RBP5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 ORC1Q13415 861 aa5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 SEZ6L2Q6UXD5 910 aa5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 CYFIP1Q7L576 1253 aa5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 DYMQ7RTS9 669 aa5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 LSRQ86X29 649 aaPredicted RBP5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 FAM181AQ8N9Y4 354 aa5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 KCNN1Q92952 543 aa5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 SLC26A8Q96RN1 970 aa5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 SOX17Q9H6I2 414 aaPredicted RBP5.32□□□□□ -1.56
DEPDC1-204ENST00000489862 DLGAP3O95886 979 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 GRIA4P48058 902 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 SPRED3Q2MJR0 410 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 SPATS1Q496A3 300 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 CCNJLQ8IV13 435 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 ZNF428Q96B54 188 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 FAM129BQ96TA1 746 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 TCF12Q99081 682 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 LIN7BQ9HAP6 207 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 PRDM7Q9NQW5 492 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 SNX11Q9Y5W9 270 aa5.31□□□□□ -1.56
DEPDC1-204ENST00000489862 A0A096LPE4 126 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 A0A1W2PPZ6 126 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 ZBTB7CA1YPR0 619 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 GSTM4Q03013 218 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 ZP2Q05996 745 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 CEACAM5P06731 702 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 IKZF1Q13422 519 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 ZNF423Q2M1K9 1284 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 TMC1Q8TDI8 760 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 ASB11Q8WXH4 323 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 NIF3L1Q9GZT8 377 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 NPHS2Q9NP85 383 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 DAGLAQ9Y4D2 1042 aa5.3□□□□□ -1.56
DEPDC1-204ENST00000489862 GPR182O15218 404 aa5.29□□□□□ -1.56
DEPDC1-204ENST00000489862 CPNE3O75131 537 aaKnown RBP5.29□□□□□ -1.56
DEPDC1-204ENST00000489862 ASPAP45381 313 aa5.29□□□□□ -1.56
DEPDC1-204ENST00000489862 PCDH1Q08174 1060 aa5.29□□□□□ -1.56
DEPDC1-204ENST00000489862 PDE3BQ13370 1112 aa5.29□□□□□ -1.56
DEPDC1-204ENST00000489862 MARCH10Q8NA82 808 aaPredicted RBP5.29□□□□□ -1.56
DEPDC1-204ENST00000489862 CLEC4MQ9H2X3 399 aaPredicted RBP5.29□□□□□ -1.56
DEPDC1-204ENST00000489862 MYRFQ9Y2G1 1151 aa5.29□□□□□ -1.56
DEPDC1-204ENST00000489862 NEFLP07196 543 aa5.28□□□□□ -1.56
DEPDC1-204ENST00000489862 FAM87AP0C7U9 286 aa5.28□□□□□ -1.56
DEPDC1-204ENST00000489862 PDE4CQ08493 712 aa5.28□□□□□ -1.56
DEPDC1-204ENST00000489862 KIAA0319Q5VV43 1072 aa5.28□□□□□ -1.56
DEPDC1-204ENST00000489862 CITED4Q96RK1 184 aa5.28□□□□□ -1.56
DEPDC1-204ENST00000489862 EIF1AYO14602 144 aaKnown RBP5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 AKAP8O43823 692 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms