RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 AATFQ9NY61 560 aaKnown RBP eCLIP23.29■■□□□ 1.32
EPHB4-207ENST00000489808 ZNF112Q9UJU3 913 aa23.29■■□□□ 1.32
EPHB4-207ENST00000489808 CSADQ9Y600 493 aa23.29■■□□□ 1.32
EPHB4-207ENST00000489808 AKAP11Q9UKA4 1901 aa23.28■■□□□ 1.32
EPHB4-207ENST00000489808 DDTLA6NHG4 134 aaPredicted RBP23.28■■□□□ 1.32
EPHB4-207ENST00000489808 GJA5P36382 358 aa23.28■■□□□ 1.32
EPHB4-207ENST00000489808 INHBEP58166 350 aa23.28■■□□□ 1.32
EPHB4-207ENST00000489808 SREBF2Q12772 1141 aa23.28■■□□□ 1.32
EPHB4-207ENST00000489808 ZSCAN29Q8IWY8 852 aaPredicted RBP23.28■■□□□ 1.32
EPHB4-207ENST00000489808 TEX11Q8IYF3 940 aa23.28■■□□□ 1.32
EPHB4-207ENST00000489808 SH3RF3Q8TEJ3 882 aaPredicted RBP23.28■■□□□ 1.32
EPHB4-207ENST00000489808 ZKSCAN4Q969J2 545 aaPredicted RBP23.28■■□□□ 1.32
EPHB4-207ENST00000489808 BOLA2Q9H3K6 86 aa23.28■■□□□ 1.32
EPHB4-207ENST00000489808 MANSC4A6NHS7 340 aaPredicted RBP23.27■■□□□ 1.32
EPHB4-207ENST00000489808 PLCG2P16885 1265 aa23.27■■□□□ 1.32
EPHB4-207ENST00000489808 MAP3K10Q02779 954 aa23.27■■□□□ 1.32
EPHB4-207ENST00000489808 AAMPQ13685 434 aa23.27■■□□□ 1.32
EPHB4-207ENST00000489808 TMED8Q6PL24 325 aaPredicted RBP23.27■■□□□ 1.32
EPHB4-207ENST00000489808 MAGEB6Q8N7X4 407 aa23.27■■□□□ 1.32
EPHB4-207ENST00000489808 OPTNQ96CV9 577 aa23.27■■□□□ 1.32
EPHB4-207ENST00000489808 DNAJC2Q99543 621 aaKnown RBP23.27■■□□□ 1.32
EPHB4-207ENST00000489808 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
EPHB4-207ENST00000489808 MYH2Q9UKX2 1941 aa23.27■■□□□ 1.32
EPHB4-207ENST00000489808 GOLIM4O00461 696 aa23.26■■□□□ 1.31
EPHB4-207ENST00000489808 INPP5BP32019 993 aa23.25■■□□□ 1.31
EPHB4-207ENST00000489808 CNKSR2Q8WXI2 1034 aa23.25■■□□□ 1.31
EPHB4-207ENST00000489808 HAUS7Q99871 368 aa23.25■■□□□ 1.31
EPHB4-207ENST00000489808 SNCAIPQ9Y6H5 919 aa23.25■■□□□ 1.31
EPHB4-207ENST00000489808 DYNLL1P63167 89 aaKnown RBP23.24■■□□□ 1.31
EPHB4-207ENST00000489808 ERO1BQ86YB8 467 aa23.24■■□□□ 1.31
EPHB4-207ENST00000489808 EDC3Q96F86 508 aaKnown RBP23.24■■□□□ 1.31
EPHB4-207ENST00000489808 OSBPL5Q9H0X9 879 aaPredicted RBP23.24■■□□□ 1.31
EPHB4-207ENST00000489808 ATRNL1Q5VV63 1379 aa23.24■■□□□ 1.31
EPHB4-207ENST00000489808 SPDYE5A6NIY4 337 aa23.23■■□□□ 1.31
EPHB4-207ENST00000489808 PHF20L1A8MW92 1017 aa23.23■■□□□ 1.31
EPHB4-207ENST00000489808 HDAC1Q13547 482 aaPredicted RBP23.23■■□□□ 1.31
EPHB4-207ENST00000489808 SLC9C2Q5TAH2 1124 aa23.23■■□□□ 1.31
EPHB4-207ENST00000489808 MIGA1Q8NAN2 632 aa23.23■■□□□ 1.31
EPHB4-207ENST00000489808 TGFBRAP1Q8WUH2 860 aa23.23■■□□□ 1.31
EPHB4-207ENST00000489808 ECHDC1Q9NTX5 307 aa23.23■■□□□ 1.31
EPHB4-207ENST00000489808 PAG1Q9NWQ8 432 aa23.23■■□□□ 1.31
EPHB4-207ENST00000489808 TESPA1A2RU30 521 aaPredicted RBP23.22■■□□□ 1.31
EPHB4-207ENST00000489808 TBC1D12O60347 775 aa23.22■■□□□ 1.31
EPHB4-207ENST00000489808 MS4A4AQ96JQ5 239 aa23.22■■□□□ 1.31
EPHB4-207ENST00000489808 SLURP2P0DP57 97 aa23.21■■□□□ 1.31
EPHB4-207ENST00000489808 PDE6AP16499 860 aa23.21■■□□□ 1.31
EPHB4-207ENST00000489808 IFNL1Q8IU54 200 aa23.21■■□□□ 1.31
EPHB4-207ENST00000489808 CERS3Q8IU89 383 aa23.21■■□□□ 1.31
EPHB4-207ENST00000489808 TNS4Q8IZW8 715 aa23.21■■□□□ 1.31
EPHB4-207ENST00000489808 EXOC6Q8TAG9 804 aa23.21■■□□□ 1.31
EPHB4-207ENST00000489808 OTUD5Q96G74 571 aa23.21■■□□□ 1.31
EPHB4-207ENST00000489808 TBC1D8O95759 1140 aa23.2■■□□□ 1.3
EPHB4-207ENST00000489808 ALDH1A1P00352 501 aa23.2■■□□□ 1.3
EPHB4-207ENST00000489808 NOL9Q5SY16 702 aaKnown RBP23.2■■□□□ 1.3
EPHB4-207ENST00000489808 MAPKAPK5Q8IW41 473 aa23.2■■□□□ 1.3
EPHB4-207ENST00000489808 DHX36Q9H2U1 1008 aaKnown RBP23.2■■□□□ 1.3
EPHB4-207ENST00000489808 GTF2A2P52657 109 aa23.19■■□□□ 1.3
EPHB4-207ENST00000489808 PPATQ06203 517 aa23.19■■□□□ 1.3
EPHB4-207ENST00000489808 GCC1Q96CN9 775 aa23.19■■□□□ 1.3
EPHB4-207ENST00000489808 PTPN18Q99952 460 aa23.19■■□□□ 1.3
EPHB4-207ENST00000489808 PI4KBQ9UBF8 816 aa23.19■■□□□ 1.3
EPHB4-207ENST00000489808 FLT1P17948 1338 aa23.18■■□□□ 1.3
EPHB4-207ENST00000489808 ZNF532Q9HCE3 1301 aa23.18■■□□□ 1.3
EPHB4-207ENST00000489808 TCRBV5S4A2TA0A5A2 114 aa23.18■■□□□ 1.3
EPHB4-207ENST00000489808 IGF2BP3O00425 579 aaKnown RBP eCLIP23.18■■□□□ 1.3
EPHB4-207ENST00000489808 IRF6O14896 467 aa23.18■■□□□ 1.3
EPHB4-207ENST00000489808 PPIL2Q13356 520 aa23.18■■□□□ 1.3
EPHB4-207ENST00000489808 ANKRD45Q5TZF3 282 aa23.18■■□□□ 1.3
EPHB4-207ENST00000489808 GPATCH3Q96I76 525 aa23.18■■□□□ 1.3
EPHB4-207ENST00000489808 RIOK1Q9BRS2 568 aaKnown RBP23.18■■□□□ 1.3
EPHB4-207ENST00000489808 CFHR5Q9BXR6 569 aa23.18■■□□□ 1.3
EPHB4-207ENST00000489808 COL2A1P02458 1487 aaPredicted RBP23.17■■□□□ 1.3
EPHB4-207ENST00000489808 MAGEB6P1A0A0J9YX57 407 aa23.17■■□□□ 1.3
EPHB4-207ENST00000489808 OTUD7BQ6GQQ9 843 aa23.17■■□□□ 1.3
EPHB4-207ENST00000489808 BRI3BPQ8WY22 251 aa23.17■■□□□ 1.3
EPHB4-207ENST00000489808 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.17■■□□□ 1.3
EPHB4-207ENST00000489808 CCL15-CCL14A0A0B4J2E2 113 aa23.16■■□□□ 1.3
EPHB4-207ENST00000489808 CTNND1O60716 968 aaKnown RBP23.16■■□□□ 1.3
EPHB4-207ENST00000489808 ADD2P35612 726 aa23.16■■□□□ 1.3
EPHB4-207ENST00000489808 CCL15Q16663 113 aa23.16■■□□□ 1.3
EPHB4-207ENST00000489808 FOXP4Q8IVH2 680 aaPredicted RBP23.16■■□□□ 1.3
EPHB4-207ENST00000489808 SCYL3Q8IZE3 742 aa23.16■■□□□ 1.3
EPHB4-207ENST00000489808 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.16■■□□□ 1.31e-6■■□□□ 12.9
EPHB4-207ENST00000489808 R3HDMLQ9H3Y0 253 aa23.16■■□□□ 1.3
EPHB4-207ENST00000489808 RWDD1Q9H446 243 aaPredicted RBP23.16■■□□□ 1.3
EPHB4-207ENST00000489808 PALD1Q9ULE6 856 aa23.16■■□□□ 1.3
EPHB4-207ENST00000489808 CETPP11597 493 aa23.15■■□□□ 1.3
EPHB4-207ENST00000489808 USP5P45974 858 aa23.15■■□□□ 1.3
EPHB4-207ENST00000489808 SNAPC2Q13487 334 aa23.15■■□□□ 1.3
EPHB4-207ENST00000489808 TSHZ3Q63HK5 1081 aa23.15■■□□□ 1.3
EPHB4-207ENST00000489808 HERC5Q9UII4 1024 aaKnown RBP23.15■■□□□ 1.3
EPHB4-207ENST00000489808 FAM196BA6NMK8 535 aa23.14■■□□□ 1.29
EPHB4-207ENST00000489808 SLFNL1Q499Z3 407 aa23.14■■□□□ 1.29
EPHB4-207ENST00000489808 NOM1Q5C9Z4 860 aaKnown RBP23.14■■□□□ 1.29
EPHB4-207ENST00000489808 METTL16Q86W50 562 aaKnown RBP23.14■■□□□ 1.29
EPHB4-207ENST00000489808 OTUD7AQ8TE49 926 aaPredicted RBP23.14■■□□□ 1.29
EPHB4-207ENST00000489808 PICK1Q9NRD5 415 aa23.14■■□□□ 1.29
EPHB4-207ENST00000489808 ZBTB47Q9UFB7 747 aaPredicted RBP23.14■■□□□ 1.29
EPHB4-207ENST00000489808 SAP30BPQ9UHR5 308 aaKnown RBP23.14■■□□□ 1.29
EPHB4-207ENST00000489808 KCNH4Q9UQ05 1017 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms