RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 WDR17Q8IZU2 1322 aa9.97□□□□□ -0.81
SMC6-209ENST00000489535 PLIN1O60240 522 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 ZNF853P0CG23 659 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 AMOTQ4VCS5 1084 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 ERICH6BQ5W0A0 696 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 ZNF530Q6P9A1 599 aaPredicted RBP9.96□□□□□ -0.82
SMC6-209ENST00000489535 SLC9A9Q8IVB4 645 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.96□□□□□ -0.82
SMC6-209ENST00000489535 RHPN1Q8TCX5 695 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 RAPGEF4Q8WZA2 1011 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 KCNH4Q9UQ05 1017 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 DOT1LQ8TEK3 1739 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 UBR2Q8IWV8 1755 aa9.96□□□□□ -0.82
SMC6-209ENST00000489535 BCAR3O75815 825 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 CT47B1P0C2W7 299 aaPredicted RBP9.95□□□□□ -0.82
SMC6-209ENST00000489535 TBCELQ5QJ74 424 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 TOM1L2Q6ZVM7 507 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 DMRTC2Q8IXT2 367 aaPredicted RBP9.95□□□□□ -0.82
SMC6-209ENST00000489535 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMC6-209ENST00000489535 WFDC12Q8WWY7 111 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 BHMTQ93088 406 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 HSH2DQ96JZ2 352 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 CEP63Q96MT8 703 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 PCMTD2Q9NV79 361 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 ZNF232Q9UNY5 417 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 PAPPAQ13219 1627 aa9.95□□□□□ -0.82
SMC6-209ENST00000489535 ARID1BQ8NFD5 2236 aaPredicted RBP9.94□□□□□ -0.82
SMC6-209ENST00000489535 OVOS2A0A0G2JMS6 1433 aa9.94□□□□□ -0.82
SMC6-209ENST00000489535 PLEKHG2Q9H7P9 1386 aa9.94□□□□□ -0.82
SMC6-209ENST00000489535 YBX3P16989 372 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMC6-209ENST00000489535 RARSP54136 660 aaKnown RBP9.94□□□□□ -0.82
SMC6-209ENST00000489535 EVA1CP58658 441 aa9.94□□□□□ -0.82
SMC6-209ENST00000489535 TYRO3Q06418 890 aa9.94□□□□□ -0.82
SMC6-209ENST00000489535 AKAP4Q5JQC9 854 aa9.94□□□□□ -0.82
SMC6-209ENST00000489535 C1orf141Q5JVX7 400 aa9.94□□□□□ -0.82
SMC6-209ENST00000489535 UBE2OQ9C0C9 1292 aaKnown RBP9.94□□□□□ -0.82
SMC6-209ENST00000489535 CHL1O00533 1208 aa9.93□□□□□ -0.82
SMC6-209ENST00000489535 CANXP27824 592 aaKnown RBP9.93□□□□□ -0.82
SMC6-209ENST00000489535 NOS3P29474 1203 aa9.93□□□□□ -0.82
SMC6-209ENST00000489535 TBC1D8BQ0IIM8 1120 aa9.93□□□□□ -0.82
SMC6-209ENST00000489535 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
SMC6-209ENST00000489535 BTG4Q9NY30 223 aa9.93□□□□□ -0.82
SMC6-209ENST00000489535 NAGPAQ9UK23 515 aa9.93□□□□□ -0.82
SMC6-209ENST00000489535 CEMIPQ8WUJ3 1361 aa9.92□□□□□ -0.82
SMC6-209ENST00000489535 SERTM1A2A2V5 107 aa9.92□□□□□ -0.82
SMC6-209ENST00000489535 IREB2P48200 963 aaKnown RBP9.92□□□□□ -0.82
SMC6-209ENST00000489535 PSAPL1Q6NUJ1 521 aa9.92□□□□□ -0.82
SMC6-209ENST00000489535 MEGF10Q96KG7 1140 aa9.92□□□□□ -0.82
SMC6-209ENST00000489535 CARD10Q9BWT7 1032 aa9.92□□□□□ -0.82
SMC6-209ENST00000489535 BCL2L13Q9BXK5 485 aa9.92□□□□□ -0.82
SMC6-209ENST00000489535 PPP4R2Q9NY27 417 aa9.92□□□□□ -0.82
SMC6-209ENST00000489535 TSPYL4Q9UJ04 414 aa9.92□□□□□ -0.82
SMC6-209ENST00000489535 SPG7Q9UQ90 795 aa9.92□□□□□ -0.82
SMC6-209ENST00000489535 MRC1P22897 1456 aa9.91□□□□□ -0.82
SMC6-209ENST00000489535 AFDNP55196 1824 aaKnown RBP9.91□□□□□ -0.82
SMC6-209ENST00000489535 JCADQ9P266 1359 aa9.91□□□□□ -0.82
SMC6-209ENST00000489535 RNMTO43148 476 aaKnown RBP9.91□□□□□ -0.82
SMC6-209ENST00000489535 TWISTNBQ3B726 338 aaPredicted RBP9.91□□□□□ -0.82
SMC6-209ENST00000489535 LARP1Q6PKG0 1096 aaKnown RBP9.91□□□□□ -0.82
SMC6-209ENST00000489535 PRR23CQ6ZRP0 262 aa9.91□□□□□ -0.82
SMC6-209ENST00000489535 TSPYL6Q8N831 410 aa9.91□□□□□ -0.82
SMC6-209ENST00000489535 EXOC6Q8TAG9 804 aa9.91□□□□□ -0.82
SMC6-209ENST00000489535 FRAT1Q92837 279 aaPredicted RBP9.91□□□□□ -0.82
SMC6-209ENST00000489535 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
SMC6-209ENST00000489535 LGR6Q9HBX8 967 aa9.91□□□□□ -0.82
SMC6-209ENST00000489535 SMC4Q9NTJ3 1288 aa9.91□□□□□ -0.82
SMC6-209ENST00000489535 MIS18AQ9NYP9 233 aa9.91□□□□□ -0.82
SMC6-209ENST00000489535 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.82
SMC6-209ENST00000489535 SFI1A8K8P3 1242 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 ELL2O00472 640 aaPredicted RBP9.9□□□□□ -0.82
SMC6-209ENST00000489535 VAMP4O75379 141 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 GTF2IP78347 998 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 TEFQ10587 303 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 TAF7Q15545 349 aaPredicted RBP9.9□□□□□ -0.82
SMC6-209ENST00000489535 ALDH1L2Q3SY69 923 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 C20orf194Q5TEA3 1177 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 C1orf53Q5VUE5 145 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 MPRIPQ6WCQ1 1025 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 TNS4Q8IZW8 715 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 C8orf58Q8NAV2 365 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 ZNF280CQ8ND82 737 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 SSH1Q8WYL5 1049 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 ZNF428Q96B54 188 aa9.9□□□□□ -0.82
SMC6-209ENST00000489535 SBF2Q86WG5 1849 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 SLIT2O94813 1529 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 PIK3CDO00329 1044 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 IL2RBP14784 551 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 PHKG2P15735 406 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 FBXO11Q86XK2 927 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 IFNL2Q8IZJ0 200 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 IGFLR1Q9H665 355 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 ANKIB1Q9P2G1 1089 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 LRP6O75581 1613 aa9.89□□□□□ -0.83
SMC6-209ENST00000489535 PCDH11XQ9BZA7 1347 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 PCDH11YQ9BZA8 1340 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 SSTR4P31391 388 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 KRT24Q2M2I5 525 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 EML3Q32P44 896 aa9.88□□□□□ -0.83
SMC6-209ENST00000489535 ZKSCAN2Q63HK3 967 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms