RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 XP32Q5T750 250 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 CASC1Q6TDU7 716 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
PDCD4-209ENST00000489049 CD163Q86VB7 1156 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 SIRT2Q8IXJ6 389 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 USHBP1Q8N6Y0 703 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 LRRC59Q96AG4 307 aaKnown RBP8.17□□□□□ -1.1
PDCD4-209ENST00000489049 PRR12Q9ULL5 1215 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 COL18A1P39060 1754 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 KDM3BQ7LBC6 1761 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 STRCQ7RTU9 1775 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 ERVV-2B6SEH9 535 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 UBTFL1P0CB47 393 aaPredicted RBP8.16□□□□□ -1.1
PDCD4-209ENST00000489049 PHKG2P15735 406 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 CHRNA4P43681 627 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 AOX1Q06278 1338 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 TEAD4Q15561 434 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 KRT24Q2M2I5 525 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 WDR17Q8IZU2 1322 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 CARD10Q9BWT7 1032 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 SLC52A2Q9HAB3 445 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 LGR6Q9HBX8 967 aa8.16□□□□□ -1.1
PDCD4-209ENST00000489049 DDX21Q9NR30 783 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDCD4-209ENST00000489049 N4BP2Q86UW6 1770 aaPredicted RBP8.15□□□□□ -1.1
PDCD4-209ENST00000489049 USP17L5A8MUK1 530 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 EML1O00423 815 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 EPB41L2O43491 1005 aaKnown RBP8.15□□□□□ -1.1
PDCD4-209ENST00000489049 CDC45O75419 566 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 NOS2P35228 1153 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 SLC4A10Q6U841 1118 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 MPRIPQ6WCQ1 1025 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 ADAMTS19Q8TE59 1207 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 DNAAF4Q8WXU2 420 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 LNPKQ9C0E8 428 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 PRDM11Q9NQV5 511 aa8.15□□□□□ -1.1
PDCD4-209ENST00000489049 MRC1P22897 1456 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 PCDH11XQ9BZA7 1347 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 PCDH11YQ9BZA8 1340 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 SNRPA1P09661 255 aaKnown RBP8.14□□□□□ -1.11
PDCD4-209ENST00000489049 RBM25P49756 843 aaKnown RBP8.14□□□□□ -1.11
PDCD4-209ENST00000489049 MTX1Q13505 466 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 ZNF790Q6PG37 636 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 LARP1Q6PKG0 1096 aaKnown RBP8.14□□□□□ -1.11
PDCD4-209ENST00000489049 KSR2Q6VAB6 950 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 G2E3Q7L622 706 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 SLC9A9Q8IVB4 645 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 DEPDC4Q8N2C3 294 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 FNBP4Q8N3X1 1017 aaPredicted RBP8.14□□□□□ -1.11
PDCD4-209ENST00000489049 TRIM11Q96F44 468 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 MEIS3Q99687 375 aa8.14□□□□□ -1.11
PDCD4-209ENST00000489049 XIRP1Q702N8 1843 aaKnown RBP8.13□□□□□ -1.11
PDCD4-209ENST00000489049 CRYBG1Q9Y4K1 1723 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 NEXNQ0ZGT2 675 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 TBCELQ5QJ74 424 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 BEND3Q5T5X7 828 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 LRRC69Q6ZNQ3 347 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 SYT9Q86SS6 491 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 SKAP1Q86WV1 359 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 ERC1Q8IUD2 1116 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 PLEKHM2Q8IWE5 1019 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 TNS4Q8IZW8 715 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 TTC5Q8N0Z6 440 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 LINS1Q8NG48 757 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 ZCRB1Q8TBF4 217 aaKnown RBP8.13□□□□□ -1.11
PDCD4-209ENST00000489049 SSH3Q8TE77 659 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 C7orf43Q8WVR3 580 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 FMNL2Q96PY5 1086 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 C22orf23Q9BZE7 217 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 LRRCC1Q9C099 1032 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 USP44Q9H0E7 712 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 STAP2Q9UGK3 403 aa8.13□□□□□ -1.11
PDCD4-209ENST00000489049 GPC6Q9Y625 555 aaPredicted RBP8.13□□□□□ -1.11
PDCD4-209ENST00000489049 SIPA1L3O60292 1781 aaPredicted RBP8.12□□□□□ -1.11
PDCD4-209ENST00000489049 PKD1L3Q7Z443 1732 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 UTYO14607 1347 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 ZNF335Q9H4Z2 1342 aaPredicted RBP8.12□□□□□ -1.11
PDCD4-209ENST00000489049 ELOA3CA0A087WX78 387 aaPredicted RBP8.12□□□□□ -1.11
PDCD4-209ENST00000489049 A6NJR5 290 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 ELOA3DA6NLF2 546 aaPredicted RBP8.12□□□□□ -1.11
PDCD4-209ENST00000489049 F6X3S4 739 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 REC8O95072 547 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 IL2RBP14784 551 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 EIF2S2P20042 333 aaKnown RBP8.12□□□□□ -1.11
PDCD4-209ENST00000489049 CABP4P57796 275 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 ELOA3BQ3SY89 546 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 TTC22Q5TAA0 569 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 ELOA3Q8NG57 546 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 SNX21Q969T3 373 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 MDFIQ99750 246 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 TEX13AQ9BXU3 409 aaPredicted RBP8.12□□□□□ -1.11
PDCD4-209ENST00000489049 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 CHPF2Q9P2E5 772 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 ZNF232Q9UNY5 417 aa8.12□□□□□ -1.11
PDCD4-209ENST00000489049 PARP4Q9UKK3 1724 aaKnown RBP8.12□□□□□ -1.11
PDCD4-209ENST00000489049 COL15A1P39059 1388 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 EVA1CP58658 441 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 SH3PXD2AQ5TCZ1 1133 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 TOM1L2Q6ZVM7 507 aa8.11□□□□□ -1.11
PDCD4-209ENST00000489049 TICAM2Q86XR7 235 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms