RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 G3BP1Q13283 466 aaKnown RBP eCLIP32.08■■■□□ 2.73
RNF220-216ENST00000488865 MOGSQ13724 837 aa32.08■■■□□ 2.73
RNF220-216ENST00000488865 GORABQ5T7V8 394 aa32.08■■■□□ 2.73
RNF220-216ENST00000488865 ZSCAN29Q8IWY8 852 aaPredicted RBP32.08■■■□□ 2.73
RNF220-216ENST00000488865 CLUAP1Q96AJ1 413 aa32.08■■■□□ 2.73
RNF220-216ENST00000488865 HMG20BQ9P0W2 317 aa32.08■■■□□ 2.73
RNF220-216ENST00000488865 GPR75-ASB3A0A0A6YYF3 556 aa32.07■■■□□ 2.72
RNF220-216ENST00000488865 PNMA6EA0A0J9YXQ4 647 aa32.07■■■□□ 2.72
RNF220-216ENST00000488865 PRMT2P55345 433 aa32.07■■■□□ 2.72
RNF220-216ENST00000488865 SH3BP5LQ7L8J4 393 aa32.07■■■□□ 2.72
RNF220-216ENST00000488865 SCYL3Q8IZE3 742 aa32.07■■■□□ 2.72
RNF220-216ENST00000488865 TMEM106CQ9BVX2 250 aa32.07■■■□□ 2.72
RNF220-216ENST00000488865 ARHGAP39Q9C0H5 1083 aa32.07■■■□□ 2.72
RNF220-216ENST00000488865 SPATA5Q8NB90 893 aa32.06■■■□□ 2.72
RNF220-216ENST00000488865 DDX4Q9NQI0 724 aaKnown RBP32.06■■■□□ 2.72
RNF220-216ENST00000488865 PICK1Q9NRD5 415 aa32.06■■■□□ 2.72
RNF220-216ENST00000488865 NPM3O75607 178 aaKnown RBP32.05■■■□□ 2.72
RNF220-216ENST00000488865 ARID4AP29374 1257 aaPredicted RBP32.05■■■□□ 2.72
RNF220-216ENST00000488865 ZKSCAN2Q63HK3 967 aa32.05■■■□□ 2.72
RNF220-216ENST00000488865 CPA4Q9UI42 421 aa32.05■■■□□ 2.72
RNF220-216ENST00000488865 ADGRA2Q96PE1 1338 aa32.04■■■□□ 2.72
RNF220-216ENST00000488865 DDTLA6NHG4 134 aaPredicted RBP32.04■■■□□ 2.72
RNF220-216ENST00000488865 MAP4K4O95819 1239 aaPredicted RBP32.04■■■□□ 2.72
RNF220-216ENST00000488865 RHBDL3P58872 404 aa32.04■■■□□ 2.72
RNF220-216ENST00000488865 GSTO1P78417 241 aa32.04■■■□□ 2.72
RNF220-216ENST00000488865 ZNF384Q8TF68 577 aa32.04■■■□□ 2.72
RNF220-216ENST00000488865 LDHCP07864 332 aa32.03■■■□□ 2.72
RNF220-216ENST00000488865 EN2P19622 333 aaPredicted RBP32.03■■■□□ 2.72
RNF220-216ENST00000488865 TMEM57Q8N5G2 664 aa32.03■■■□□ 2.72
RNF220-216ENST00000488865 ZHX2Q9Y6X8 837 aa32.03■■■□□ 2.72
RNF220-216ENST00000488865 ZSWIM8A7E2V4 1837 aa32.03■■■□□ 2.72
RNF220-216ENST00000488865 PTPRAP18433 802 aa32.02■■■□□ 2.72
RNF220-216ENST00000488865 PICALMQ13492 652 aa32.02■■■□□ 2.72
RNF220-216ENST00000488865 GPAT2Q6NUI2 795 aa32.02■■■□□ 2.72
RNF220-216ENST00000488865 NSUN4Q96CB9 384 aaKnown RBP32.02■■■□□ 2.72
RNF220-216ENST00000488865 PARK7Q99497 189 aaKnown RBP32.02■■■□□ 2.72
RNF220-216ENST00000488865 CTNND1O60716 968 aaKnown RBP32.01■■■□□ 2.71
RNF220-216ENST00000488865 UQCRFS1P1P0C7P4 283 aa32.01■■■□□ 2.71
RNF220-216ENST00000488865 PI16Q6UXB8 463 aa32.01■■■□□ 2.71
RNF220-216ENST00000488865 FASTKD5Q7L8L6 764 aaKnown RBP32.01■■■□□ 2.71
RNF220-216ENST00000488865 A0A0G2JLL6 359 aaPredicted RBP32■■■□□ 2.71
RNF220-216ENST00000488865 TBC1D12O60347 775 aa32■■■□□ 2.71
RNF220-216ENST00000488865 PSMC4P43686 418 aa32■■■□□ 2.71
RNF220-216ENST00000488865 POLA2Q14181 598 aa32■■■□□ 2.71
RNF220-216ENST00000488865 TBC1D9Q6ZT07 1266 aa32■■■□□ 2.71
RNF220-216ENST00000488865 PRRT2Q7Z6L0 340 aaPredicted RBP32■■■□□ 2.71
RNF220-216ENST00000488865 AFG3L2Q9Y4W6 797 aa32■■■□□ 2.71
RNF220-216ENST00000488865 HOXD10P28358 340 aa31.99■■■□□ 2.71
RNF220-216ENST00000488865 GPR108Q9NPR9 543 aa31.99■■■□□ 2.71
RNF220-216ENST00000488865 CTGFP29279 349 aa31.98■■■□□ 2.71
RNF220-216ENST00000488865 MCAMP43121 646 aa31.98■■■□□ 2.71
RNF220-216ENST00000488865 SLC4A8Q2Y0W8 1093 aa31.98■■■□□ 2.71
RNF220-216ENST00000488865 TRIM47Q96LD4 638 aa31.98■■■□□ 2.71
RNF220-216ENST00000488865 RAI14Q9P0K7 980 aa31.98■■■□□ 2.71
RNF220-216ENST00000488865 SRRDQ9UH36 339 aa31.98■■■□□ 2.71
RNF220-216ENST00000488865 DOCK1Q14185 1865 aa31.97■■■□□ 2.71
RNF220-216ENST00000488865 SSH3Q8TE77 659 aa31.97■■■□□ 2.71
RNF220-216ENST00000488865 SH3TC2Q8TF17 1288 aa31.97■■■□□ 2.71
RNF220-216ENST00000488865 SLC45A1Q9Y2W3 748 aa31.97■■■□□ 2.71
RNF220-216ENST00000488865 COL2A1P02458 1487 aaPredicted RBP31.97■■■□□ 2.71
RNF220-216ENST00000488865 SLURP2P0DP57 97 aa31.96■■■□□ 2.71
RNF220-216ENST00000488865 BCRP11274 1271 aa31.96■■■□□ 2.71
RNF220-216ENST00000488865 ATP8B2P98198 1209 aa31.96■■■□□ 2.71
RNF220-216ENST00000488865 LRP2BPQ9P2M1 347 aa31.96■■■□□ 2.71
RNF220-216ENST00000488865 FMNL1O95466 1100 aaPredicted RBP31.95■■■□□ 2.71
RNF220-216ENST00000488865 CYP2C8P10632 490 aa31.95■■■□□ 2.71
RNF220-216ENST00000488865 OSBPP22059 807 aa31.94■■■□□ 2.7
RNF220-216ENST00000488865 HNRNPUQ00839 825 aaKnown RBP eCLIP31.94■■■□□ 2.7
RNF220-216ENST00000488865 TNNI3KQ59H18 835 aa31.94■■■□□ 2.7
RNF220-216ENST00000488865 FPGT-TNNI3KV9GXZ4 949 aa31.94■■■□□ 2.7
RNF220-216ENST00000488865 OS9Q13438 667 aaPredicted RBP31.93■■■□□ 2.7
RNF220-216ENST00000488865 GADL1Q6ZQY3 521 aa31.93■■■□□ 2.7
RNF220-216ENST00000488865 GCC1Q96CN9 775 aa31.93■■■□□ 2.7
RNF220-216ENST00000488865 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.93■■■□□ 2.7
RNF220-216ENST00000488865 PHIPQ8WWQ0 1821 aa31.93■■■□□ 2.7
RNF220-216ENST00000488865 PTPRFP10586 1907 aa31.92■■■□□ 2.7
RNF220-216ENST00000488865 ECM2O94769 699 aaPredicted RBP31.92■■■□□ 2.7
RNF220-216ENST00000488865 CCDC158Q5M9N0 1113 aa31.92■■■□□ 2.7
RNF220-216ENST00000488865 TTC39AQ5SRH9 613 aa31.92■■■□□ 2.7
RNF220-216ENST00000488865 FTSJ3Q8IY81 847 aaKnown RBP31.92■■■□□ 2.7
RNF220-216ENST00000488865 OSBPL5Q9H0X9 879 aaPredicted RBP31.92■■■□□ 2.7
RNF220-216ENST00000488865 RAET1EQ8TD07 263 aa31.91■■■□□ 2.7
RNF220-216ENST00000488865 MYPNQ86TC9 1320 aa31.91■■■□□ 2.7
RNF220-216ENST00000488865 IGSF3O75054 1194 aa31.9■■■□□ 2.7
RNF220-216ENST00000488865 SURF6O75683 361 aaKnown RBP31.9■■■□□ 2.7
RNF220-216ENST00000488865 MYCP01106 439 aaPredicted RBP31.9■■■□□ 2.7
RNF220-216ENST00000488865 FCGRTP55899 365 aa31.9■■■□□ 2.7
RNF220-216ENST00000488865 TEX11Q8IYF3 940 aa31.9■■■□□ 2.7
RNF220-216ENST00000488865 ZNF512BQ96KM6 892 aaPredicted RBP31.9■■■□□ 2.7
RNF220-216ENST00000488865 DBNDD2Q9BQY9 259 aa31.9■■■□□ 2.7
RNF220-216ENST00000488865 NOL10Q9BSC4 688 aaKnown RBP31.9■■■□□ 2.7
RNF220-216ENST00000488865 NOP58Q9Y2X3 529 aaKnown RBP31.9■■■□□ 2.7
RNF220-216ENST00000488865 TRIM75PA6NK02 468 aa31.89■■■□□ 2.7
RNF220-216ENST00000488865 NAA16Q6N069 864 aaPredicted RBP31.89■■■□□ 2.7
RNF220-216ENST00000488865 SNRKQ9NRH2 765 aa31.89■■■□□ 2.7
RNF220-216ENST00000488865 ZBTB7BO15156 539 aaPredicted RBP31.88■■■□□ 2.69
RNF220-216ENST00000488865 BAG3O95817 575 aa31.88■■■□□ 2.69
RNF220-216ENST00000488865 GRK4P32298 578 aa31.88■■■□□ 2.69
RNF220-216ENST00000488865 MIER1Q8N108 512 aa31.88■■■□□ 2.69
RNF220-216ENST00000488865 TBC1D2Q9BYX2 928 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms