RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 LDLRAD1Q5T700 205 aa22.6■■□□□ 1.21
PTCD3-217ENST00000488801 SH3BP5LQ7L8J4 393 aa22.6■■□□□ 1.21
PTCD3-217ENST00000488801 MKRN1Q9UHC7 482 aaKnown RBP22.6■■□□□ 1.21
PTCD3-217ENST00000488801 CHGBP05060 677 aa22.59■■□□□ 1.21
PTCD3-217ENST00000488801 DYNLL1P63167 89 aaKnown RBP22.59■■□□□ 1.21
PTCD3-217ENST00000488801 TCP10Q12799 353 aa22.59■■□□□ 1.21
PTCD3-217ENST00000488801 TEX11Q8IYF3 940 aa22.59■■□□□ 1.21
PTCD3-217ENST00000488801 JMYQ8N9B5 988 aa22.59■■□□□ 1.21
PTCD3-217ENST00000488801 NOL10Q9BSC4 688 aaKnown RBP22.59■■□□□ 1.21
PTCD3-217ENST00000488801 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.59■■□□□ 1.212e-8■■■■□ 20.5
PTCD3-217ENST00000488801 FZD1Q9UP38 647 aa22.59■■□□□ 1.21
PTCD3-217ENST00000488801 FLT1P17948 1338 aa22.58■■□□□ 1.21
PTCD3-217ENST00000488801 UNCXA6NJT0 531 aa22.58■■□□□ 1.21
PTCD3-217ENST00000488801 USP2O75604 605 aaPredicted RBP22.58■■□□□ 1.21
PTCD3-217ENST00000488801 PDE4AP27815 886 aa22.58■■□□□ 1.21
PTCD3-217ENST00000488801 VEGFBP49765 207 aa22.58■■□□□ 1.21
PTCD3-217ENST00000488801 MIGA1Q8NAN2 632 aa22.58■■□□□ 1.21
PTCD3-217ENST00000488801 OSBPL5Q9H0X9 879 aaPredicted RBP22.58■■□□□ 1.21
PTCD3-217ENST00000488801 DDTLA6NHG4 134 aaPredicted RBP22.57■■□□□ 1.2
PTCD3-217ENST00000488801 FAM155AB1AL88 458 aaPredicted RBP22.57■■□□□ 1.2
PTCD3-217ENST00000488801 MAP3K10Q02779 954 aa22.57■■□□□ 1.2
PTCD3-217ENST00000488801 SLFNL1Q499Z3 407 aa22.57■■□□□ 1.2
PTCD3-217ENST00000488801 RGMBQ6NW40 437 aa22.57■■□□□ 1.2
PTCD3-217ENST00000488801 ARMC9Q7Z3E5 817 aa22.57■■□□□ 1.2
PTCD3-217ENST00000488801 PPP1R12BO60237 982 aaPredicted RBP22.56■■□□□ 1.2
PTCD3-217ENST00000488801 PICALMQ13492 652 aa22.56■■□□□ 1.2
PTCD3-217ENST00000488801 CYP4F22Q6NT55 531 aa22.56■■□□□ 1.2
PTCD3-217ENST00000488801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.56■■□□□ 1.2
PTCD3-217ENST00000488801 HOOK2Q96ED9 719 aa22.56■■□□□ 1.2
PTCD3-217ENST00000488801 CAPNS2Q96L46 248 aa22.56■■□□□ 1.2
PTCD3-217ENST00000488801 ANGEL1Q9UNK9 670 aaKnown RBP22.56■■□□□ 1.2
PTCD3-217ENST00000488801 LAMA4Q16363 1823 aa22.56■■□□□ 1.2
PTCD3-217ENST00000488801 WDR33Q9C0J8 1336 aaKnown RBP22.56■■□□□ 1.2
PTCD3-217ENST00000488801 UBE2Q2LH0YL09 131 aa22.55■■□□□ 1.2
PTCD3-217ENST00000488801 SLC10A3P09131 477 aa22.55■■□□□ 1.2
PTCD3-217ENST00000488801 ZSCAN25Q6NSZ9 544 aa22.55■■□□□ 1.2
PTCD3-217ENST00000488801 RASAL3Q86YV0 1011 aa22.55■■□□□ 1.2
PTCD3-217ENST00000488801 MAGEB6P1A0A0J9YX57 407 aa22.54■■□□□ 1.2
PTCD3-217ENST00000488801 PRKG1Q13976 671 aa22.54■■□□□ 1.2
PTCD3-217ENST00000488801 LCORLQ8N3X6 602 aa22.54■■□□□ 1.2
PTCD3-217ENST00000488801 TGFBRAP1Q8WUH2 860 aa22.54■■□□□ 1.2
PTCD3-217ENST00000488801 GREB1LQ9C091 1923 aaPredicted RBP22.54■■□□□ 1.2
PTCD3-217ENST00000488801 RNF113AO15541 343 aaKnown RBP22.53■■□□□ 1.2
PTCD3-217ENST00000488801 ZFYP08048 801 aaPredicted RBP22.53■■□□□ 1.2
PTCD3-217ENST00000488801 ECE1P42892 770 aa22.53■■□□□ 1.2
PTCD3-217ENST00000488801 IREB2P48200 963 aaKnown RBP22.53■■□□□ 1.2
PTCD3-217ENST00000488801 TTLL12Q14166 644 aaPredicted RBP22.53■■□□□ 1.2
PTCD3-217ENST00000488801 DCAF15Q66K64 600 aa22.53■■□□□ 1.2
PTCD3-217ENST00000488801 CENPQQ7L2Z9 268 aaPredicted RBP22.53■■□□□ 1.2
PTCD3-217ENST00000488801 TICAM2Q86XR7 235 aa22.53■■□□□ 1.2
PTCD3-217ENST00000488801 CSRNP1Q96S65 589 aa22.53■■□□□ 1.2
PTCD3-217ENST00000488801 PUS7LQ9H0K6 701 aaKnown RBP22.53■■□□□ 1.2
PTCD3-217ENST00000488801 ZNF112Q9UJU3 913 aa22.53■■□□□ 1.2
PTCD3-217ENST00000488801 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.52■■□□□ 1.2
PTCD3-217ENST00000488801 METTL16Q86W50 562 aaKnown RBP22.52■■□□□ 1.2
PTCD3-217ENST00000488801 MAPKAPK5Q8IW41 473 aa22.52■■□□□ 1.2
PTCD3-217ENST00000488801 APPBP2Q92624 585 aa22.52■■□□□ 1.2
PTCD3-217ENST00000488801 EVI5LQ96CN4 794 aa22.52■■□□□ 1.2
PTCD3-217ENST00000488801 LOC285556D6RIA3 1793 aa22.52■■□□□ 1.2
PTCD3-217ENST00000488801 TBC1D12O60347 775 aa22.51■■□□□ 1.19
PTCD3-217ENST00000488801 MBD4O95243 580 aa22.51■■□□□ 1.19
PTCD3-217ENST00000488801 NEFLP07196 543 aa22.51■■□□□ 1.19
PTCD3-217ENST00000488801 ANKRD13AQ8IZ07 590 aa22.51■■□□□ 1.19
PTCD3-217ENST00000488801 OSBP2Q969R2 916 aa22.51■■□□□ 1.19
PTCD3-217ENST00000488801 CLMNQ96JQ2 1002 aa22.51■■□□□ 1.19
PTCD3-217ENST00000488801 ZNF341Q9BYN7 854 aa22.51■■□□□ 1.19
PTCD3-217ENST00000488801 DHX36Q9H2U1 1008 aaKnown RBP22.51■■□□□ 1.19
PTCD3-217ENST00000488801 ZNF157P51786 506 aaPredicted RBP22.5■■□□□ 1.19
PTCD3-217ENST00000488801 ERICH6BQ5W0A0 696 aa22.5■■□□□ 1.19
PTCD3-217ENST00000488801 CCDC102AQ96A19 550 aa22.5■■□□□ 1.19
PTCD3-217ENST00000488801 FSD1Q9BTV5 496 aa22.5■■□□□ 1.19
PTCD3-217ENST00000488801 CRNKL1Q9BZJ0 848 aaKnown RBP22.5■■□□□ 1.19
PTCD3-217ENST00000488801 ARMT1Q9H993 441 aa22.5■■□□□ 1.19
PTCD3-217ENST00000488801 PHF20L1A8MW92 1017 aa22.49■■□□□ 1.19
PTCD3-217ENST00000488801 MAP2K2P36507 400 aa22.49■■□□□ 1.19
PTCD3-217ENST00000488801 NOGQ13253 232 aa22.49■■□□□ 1.19
PTCD3-217ENST00000488801 VGLL4Q14135 290 aa22.49■■□□□ 1.19
PTCD3-217ENST00000488801 LRRFIP1Q32MZ4 808 aaKnown RBP22.49■■□□□ 1.19
PTCD3-217ENST00000488801 ZMYM1Q5SVZ6 1142 aa22.49■■□□□ 1.19
PTCD3-217ENST00000488801 MIGA2Q7L4E1 593 aa22.49■■□□□ 1.19
PTCD3-217ENST00000488801 SLURP2P0DP57 97 aa22.48■■□□□ 1.19
PTCD3-217ENST00000488801 MAP3K9P80192 1104 aa22.48■■□□□ 1.19
PTCD3-217ENST00000488801 NOL9Q5SY16 702 aaKnown RBP22.48■■□□□ 1.19
PTCD3-217ENST00000488801 ZSCAN29Q8IWY8 852 aaPredicted RBP22.48■■□□□ 1.19
PTCD3-217ENST00000488801 WRNIP1Q96S55 665 aa22.48■■□□□ 1.19
PTCD3-217ENST00000488801 ZIC5Q96T25 663 aa22.48■■□□□ 1.19
PTCD3-217ENST00000488801 DNAJC18Q9H819 358 aa22.48■■□□□ 1.19
PTCD3-217ENST00000488801 DCP1AQ9NPI6 582 aaPredicted RBP22.48■■□□□ 1.19
PTCD3-217ENST00000488801 SNCAIPQ9Y6H5 919 aa22.48■■□□□ 1.19
PTCD3-217ENST00000488801 M0R2C6 588 aa22.47■■□□□ 1.19
PTCD3-217ENST00000488801 AOC2O75106 756 aa22.47■■□□□ 1.19
PTCD3-217ENST00000488801 PAXIP1Q6ZW49 1069 aaPredicted RBP22.47■■□□□ 1.19
PTCD3-217ENST00000488801 SDR42E1Q8WUS8 393 aa22.47■■□□□ 1.19
PTCD3-217ENST00000488801 STRBPQ96SI9 672 aaKnown RBP22.47■■□□□ 1.19
PTCD3-217ENST00000488801 PI4KBQ9UBF8 816 aa22.47■■□□□ 1.19
PTCD3-217ENST00000488801 PALD1Q9ULE6 856 aa22.47■■□□□ 1.19
PTCD3-217ENST00000488801 ZBTB48P10074 688 aaPredicted RBP22.46■■□□□ 1.19
PTCD3-217ENST00000488801 GSPT1P15170 499 aaKnown RBP22.46■■□□□ 1.19
PTCD3-217ENST00000488801 INPP5BP32019 993 aa22.46■■□□□ 1.19
PTCD3-217ENST00000488801 GJA5P36382 358 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms