RNA–Protein interactions for RNA: ENST00000488779.5

EXOSC8-208, Transcript of exosome component 8, human

TSL 5

Gene EXOSC8, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOSC8-208	ENST00000488779	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.31	□□□□□ -0.6
EXOSC8-208	ENST00000488779	NUDT7	P0C024	238 aa		11.31	□□□□□ -0.6
EXOSC8-208	ENST00000488779	DEFB115	Q30KQ5	88 aa		11.31	□□□□□ -0.6
EXOSC8-208	ENST00000488779	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.31	□□□□□ -0.6
EXOSC8-208	ENST00000488779	IL1RAPL2	Q9NP60	686 aa		11.31	□□□□□ -0.6
EXOSC8-208	ENST00000488779	ABCF2	Q9UG63	623 aa		11.31	□□□□□ -0.6
EXOSC8-208	ENST00000488779	DAGLA	Q9Y4D2	1042 aa		11.31	□□□□□ -0.6
EXOSC8-208	ENST00000488779	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.31	□□□□□ -0.6
EXOSC8-208	ENST00000488779	PAPPA2	Q9BXP8	1791 aa		11.31	□□□□□ -0.6
EXOSC8-208	ENST00000488779	GPR75-ASB3	A0A0A6YYF3	556 aa		11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	ATP5J	P18859	108 aa		11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	MAP3K11	Q16584	847 aa		11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	NSUN4	Q96CB9	384 aa	Known RBP	11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	GPATCH3	Q96I76	525 aa		11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	IDI2	Q9BXS1	227 aa		11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	RWDD1	Q9H446	243 aa	Predicted RBP	11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	LRP2BP	Q9P2M1	347 aa		11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	ABT1	Q9ULW3	272 aa	Known RBP	11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	POLR2A	P24928	1970 aa	Known RBP	11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	MROH7-TTC4	A0A0A0MT08	1334 aa		11.3	□□□□□ -0.6
EXOSC8-208	ENST00000488779	AKAP11	Q9UKA4	1901 aa		11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	PPP1R12B	O60237	982 aa	Predicted RBP	11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	CYP2E1	P05181	493 aa	Predicted RBP	11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	MECOM	Q03112	1051 aa		11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	RASA3	Q14644	834 aa		11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	ARMC9	Q7Z3E5	817 aa		11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	CCDC102A	Q96A19	550 aa		11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	TDRD3	Q9H7E2	651 aa	Known RBP	11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	VEZT	Q9HBM0	779 aa		11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	TLR7	Q9NYK1	1049 aa	Known RBP	11.29	□□□□□ -0.6
EXOSC8-208	ENST00000488779	CLRN2	A0PK11	232 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	ENTPD3	O75355	529 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	BAG3	O95817	575 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	MAP2K2	P36507	400 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	ZAP70	P43403	619 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	HUNK	P57058	714 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	PPP4C	P60510	307 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	MAP3K12	Q12852	859 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	DIXDC1	Q155Q3	683 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	PI16	Q6UXB8	463 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	TICAM2	Q86XR7	235 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	FAM151A	Q8WW52	585 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	RAI14	Q9P0K7	980 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	PCDHAC2	Q9Y5I4	1007 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	TTC41P	Q6P2S7	1318 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	MAST2	Q6P0Q8	1798 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	RFX7	Q2KHR2	1363 aa		11.28	□□□□□ -0.6
EXOSC8-208	ENST00000488779	COL2A1	P02458	1487 aa	Predicted RBP	11.27	□□□□□ -0.6
EXOSC8-208	ENST00000488779	FMR1	Q06787	632 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	NOG	Q13253	232 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	LDLRAD1	Q5T700	205 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	NAA16	Q6N069	864 aa	Predicted RBP	11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	RGMB	Q6NW40	437 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	CDC42EP5	Q6NZY7	148 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	SMC5	Q8IY18	1101 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	ZNF384	Q8TF68	577 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	TEPSIN	Q96N21	525 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	HAUS7	Q99871	368 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	NOL10	Q9BSC4	688 aa	Known RBP	11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	ZNF408	Q9H9D4	720 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	ECHDC1	Q9NTX5	307 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	THSD7B	Q9C0I4	1608 aa		11.27	□□□□□ -0.61
EXOSC8-208	ENST00000488779	APBB1	O00213	710 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	ERC2	O15083	957 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	IREB2	P48200	963 aa	Known RBP	11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	HTRA3	P83110	453 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	DCAF15	Q66K64	600 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	POTEE	Q6S8J3	1075 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	TBC1D9	Q6ZT07	1266 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	EXOC6	Q8TAG9	804 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	CAPNS2	Q96L46	248 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	SNRK	Q9NRH2	765 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	USP40	Q9NVE5	1235 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	MYH2	Q9UKX2	1941 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	AOX1	Q06278	1338 aa		11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	WDR33	Q9C0J8	1336 aa	Known RBP	11.26	□□□□□ -0.61
EXOSC8-208	ENST00000488779	TCP10L2	B9ZVM9	353 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	WDHD1	O75717	1129 aa	Predicted RBP	11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	BTD	P43251	543 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	VEGFB	P49765	207 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	RHBDL3	P58872	404 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	MAP2K1	Q02750	393 aa	Predicted RBP	11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	ZSCAN25	Q6NSZ9	544 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.25	□□□□□ -0.61	4e-6	■■□□□ 13.6
EXOSC8-208	ENST00000488779	PIH1D3	Q9NQM4	214 aa	Known RBP	11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	PAG1	Q9NWQ8	432 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	MKRN1	Q9UHC7	482 aa	Known RBP	11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	LHX6	Q9UPM6	363 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	PCDHGA4	Q9Y5G9	962 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	DOCK2	Q92608	1830 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	ATRNL1	Q5VV63	1379 aa		11.25	□□□□□ -0.61
EXOSC8-208	ENST00000488779	SSC5D	A1L4H1	1573 aa		11.24	□□□□□ -0.61
EXOSC8-208	ENST00000488779	IDH1	O75874	414 aa	Known RBP	11.24	□□□□□ -0.61
EXOSC8-208	ENST00000488779	GLRX3	O76003	335 aa	Known RBP	11.24	□□□□□ -0.61
EXOSC8-208	ENST00000488779	MAP3K10	Q02779	954 aa		11.24	□□□□□ -0.61
EXOSC8-208	ENST00000488779	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.24	□□□□□ -0.61
EXOSC8-208	ENST00000488779	ANKRD13A	Q8IZ07	590 aa		11.24	□□□□□ -0.61
EXOSC8-208	ENST00000488779	TMEM39B	Q9GZU3	492 aa		11.24	□□□□□ -0.61
EXOSC8-208	ENST00000488779	FAM198A	Q9UFP1	575 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms