RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SLC45A1Q9Y2W3 748 aa23.67■■□□□ 1.38
GGPS1-206ENST00000488594 PDS5AQ29RF7 1337 aaKnown RBP23.67■■□□□ 1.38
GGPS1-206ENST00000488594 CT47B1P0C2W7 299 aaPredicted RBP23.66■■□□□ 1.38
GGPS1-206ENST00000488594 CCL5P13501 91 aa23.66■■□□□ 1.38
GGPS1-206ENST00000488594 PTPRAP18433 802 aa23.66■■□□□ 1.38
GGPS1-206ENST00000488594 MAP3K10Q02779 954 aa23.66■■□□□ 1.38
GGPS1-206ENST00000488594 PRKCZQ05513 592 aa23.66■■□□□ 1.38
GGPS1-206ENST00000488594 DZIP1Q86YF9 867 aaKnown RBP23.66■■□□□ 1.38
GGPS1-206ENST00000488594 ZSCAN29Q8IWY8 852 aaPredicted RBP23.66■■□□□ 1.38
GGPS1-206ENST00000488594 DPF3Q92784 378 aa23.66■■□□□ 1.38
GGPS1-206ENST00000488594 COPRSQ9NQ92 184 aa23.66■■□□□ 1.38
GGPS1-206ENST00000488594 BIN2Q9UBW5 565 aaPredicted RBP23.66■■□□□ 1.38
GGPS1-206ENST00000488594 LRRFIP2Q9Y608 721 aaKnown RBP23.66■■□□□ 1.38
GGPS1-206ENST00000488594 FAM163AQ96GL9 167 aaPredicted RBP23.65■■□□□ 1.38
GGPS1-206ENST00000488594 HTATIP2Q9BUP3 242 aa23.65■■□□□ 1.38
GGPS1-206ENST00000488594 API5Q9BZZ5 524 aaKnown RBP23.65■■□□□ 1.38
GGPS1-206ENST00000488594 RNF208Q9H0X6 261 aa23.65■■□□□ 1.38
GGPS1-206ENST00000488594 AFG3L2Q9Y4W6 797 aa23.65■■□□□ 1.38
GGPS1-206ENST00000488594 RFX7Q2KHR2 1363 aa23.65■■□□□ 1.38
GGPS1-206ENST00000488594 AK9Q5TCS8 1911 aa23.65■■□□□ 1.38
GGPS1-206ENST00000488594 CTNND1O60716 968 aaKnown RBP23.65■■□□□ 1.38
GGPS1-206ENST00000488594 SPTY2D1Q68D10 685 aaPredicted RBP23.65■■□□□ 1.38
GGPS1-206ENST00000488594 RASGRF1Q13972 1273 aa23.64■■□□□ 1.37
GGPS1-206ENST00000488594 UBE2Q1Q7Z7E8 422 aa23.64■■□□□ 1.37
GGPS1-206ENST00000488594 ABCF2Q9UG63 623 aa23.64■■□□□ 1.37
GGPS1-206ENST00000488594 CAPN2P17655 700 aa23.63■■□□□ 1.37
GGPS1-206ENST00000488594 ADORA1P30542 326 aa23.63■■□□□ 1.37
GGPS1-206ENST00000488594 SH3BP5LQ7L8J4 393 aa23.63■■□□□ 1.37
GGPS1-206ENST00000488594 NOB1Q9ULX3 412 aaKnown RBP23.63■■□□□ 1.37
GGPS1-206ENST00000488594 PA2G4Q9UQ80 394 aaKnown RBP23.63■■□□□ 1.37
GGPS1-206ENST00000488594 CHRDL2Q6WN34 429 aa23.62■■□□□ 1.37
GGPS1-206ENST00000488594 GADL1Q6ZQY3 521 aa23.62■■□□□ 1.37
GGPS1-206ENST00000488594 SMCR8Q8TEV9 937 aaPredicted RBP23.62■■□□□ 1.37
GGPS1-206ENST00000488594 CDCA7LQ96GN5 454 aa23.62■■□□□ 1.37
GGPS1-206ENST00000488594 AKAP2Q9Y2D5 859 aa23.62■■□□□ 1.37
GGPS1-206ENST00000488594 CEP290O15078 2479 aa23.62■■□□□ 1.37
GGPS1-206ENST00000488594 DDTLA6NHG4 134 aaPredicted RBP23.61■■□□□ 1.37
GGPS1-206ENST00000488594 BTDP43251 543 aa23.61■■□□□ 1.37
GGPS1-206ENST00000488594 MVPQ14764 893 aaKnown RBP23.61■■□□□ 1.37
GGPS1-206ENST00000488594 TRMT2AQ8IZ69 625 aaKnown RBP23.61■■□□□ 1.37
GGPS1-206ENST00000488594 U2AF1L4Q8WU68 220 aaKnown RBP23.61■■□□□ 1.37
GGPS1-206ENST00000488594 GABRQQ9UN88 632 aa23.61■■□□□ 1.37
GGPS1-206ENST00000488594 DOCK2Q92608 1830 aa23.61■■□□□ 1.37
GGPS1-206ENST00000488594 MROH7-TTC4A0A0A0MT08 1334 aa23.6■■□□□ 1.37
GGPS1-206ENST00000488594 ADCY3O60266 1144 aa23.6■■□□□ 1.37
GGPS1-206ENST00000488594 NPM3O75607 178 aaKnown RBP23.6■■□□□ 1.37
GGPS1-206ENST00000488594 TIMM10P62072 90 aa23.6■■□□□ 1.37
GGPS1-206ENST00000488594 IRF5Q13568 498 aa23.6■■□□□ 1.37
GGPS1-206ENST00000488594 PXYLP1Q8TE99 480 aa23.6■■□□□ 1.37
GGPS1-206ENST00000488594 NR2E3Q9Y5X4 410 aa23.6■■□□□ 1.37
GGPS1-206ENST00000488594 A0A1B0GUL7 405 aa23.59■■□□□ 1.37
GGPS1-206ENST00000488594 TNPO2O14787 897 aaKnown RBP23.59■■□□□ 1.37
GGPS1-206ENST00000488594 TBC1D12O60347 775 aa23.59■■□□□ 1.37
GGPS1-206ENST00000488594 FLT3LGP49771 235 aa23.59■■□□□ 1.37
GGPS1-206ENST00000488594 PICALMQ13492 652 aa23.59■■□□□ 1.37
GGPS1-206ENST00000488594 UNC93B1Q9H1C4 597 aa23.59■■□□□ 1.37
GGPS1-206ENST00000488594 DDX4Q9NQI0 724 aaKnown RBP23.59■■□□□ 1.37
GGPS1-206ENST00000488594 AGTPBP1Q9UPW5 1226 aa23.59■■□□□ 1.37
GGPS1-206ENST00000488594 GPR75-ASB3A0A0A6YYF3 556 aa23.58■■□□□ 1.37
GGPS1-206ENST00000488594 TRIM75PA6NK02 468 aa23.58■■□□□ 1.37
GGPS1-206ENST00000488594 FARP2O94887 1054 aaPredicted RBP23.58■■□□□ 1.37
GGPS1-206ENST00000488594 SGPL1O95470 568 aa23.58■■□□□ 1.37
GGPS1-206ENST00000488594 MAP4K4O95819 1239 aaPredicted RBP23.58■■□□□ 1.37
GGPS1-206ENST00000488594 ERICH6Q7L0X2 663 aa23.58■■□□□ 1.37
GGPS1-206ENST00000488594 XAGE2Q96GT9 111 aa23.58■■□□□ 1.37
GGPS1-206ENST00000488594 MEIS3Q99687 375 aa23.58■■□□□ 1.37
GGPS1-206ENST00000488594 PNMA3Q9UL41 463 aa23.58■■□□□ 1.37
GGPS1-206ENST00000488594 MYH2Q9UKX2 1941 aa23.58■■□□□ 1.36
GGPS1-206ENST00000488594 TRIOBPQ9H2D6 2365 aa23.58■■□□□ 1.36
GGPS1-206ENST00000488594 MECOMQ03112 1051 aa23.57■■□□□ 1.36
GGPS1-206ENST00000488594 RBM27Q9P2N5 1060 aaKnown RBP23.57■■□□□ 1.36
GGPS1-206ENST00000488594 SRGAP3O43295 1099 aa23.56■■□□□ 1.36
GGPS1-206ENST00000488594 INHAP05111 366 aa23.56■■□□□ 1.36
GGPS1-206ENST00000488594 GNAI3P08754 354 aa23.56■■□□□ 1.36
GGPS1-206ENST00000488594 GSTO1P78417 241 aa23.56■■□□□ 1.36
GGPS1-206ENST00000488594 LDHCP07864 332 aa23.55■■□□□ 1.36
GGPS1-206ENST00000488594 RHBDL3P58872 404 aa23.55■■□□□ 1.36
GGPS1-206ENST00000488594 TFCP2Q12800 502 aa23.55■■□□□ 1.36
GGPS1-206ENST00000488594 MTX1Q13505 466 aa23.55■■□□□ 1.36
GGPS1-206ENST00000488594 PROCA1Q8NCQ7 364 aaPredicted RBP23.55■■□□□ 1.36
GGPS1-206ENST00000488594 COA7Q96BR5 231 aa23.55■■□□□ 1.36
GGPS1-206ENST00000488594 TBC1D2Q9BYX2 928 aa23.55■■□□□ 1.36
GGPS1-206ENST00000488594 OSBPL5Q9H0X9 879 aaPredicted RBP23.55■■□□□ 1.36
GGPS1-206ENST00000488594 ELNP15502 786 aa23.54■■□□□ 1.36
GGPS1-206ENST00000488594 FAM110CQ1W6H9 321 aa23.54■■□□□ 1.36
GGPS1-206ENST00000488594 ANKRD13CQ8N6S4 541 aa23.54■■□□□ 1.36
GGPS1-206ENST00000488594 ARHGAP45Q92619 1136 aa23.54■■□□□ 1.36
GGPS1-206ENST00000488594 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.54■■□□□ 1.36
GGPS1-206ENST00000488594 MGAMO43451 1857 aa23.54■■□□□ 1.36
GGPS1-206ENST00000488594 DOCK1Q14185 1865 aa23.54■■□□□ 1.36
GGPS1-206ENST00000488594 SLURP2P0DP57 97 aa23.53■■□□□ 1.36
GGPS1-206ENST00000488594 COL2A1P02458 1487 aaPredicted RBP23.53■■□□□ 1.36
GGPS1-206ENST00000488594 TFRCP02786 760 aaKnown RBP23.52■■□□□ 1.36
GGPS1-206ENST00000488594 SPATA5Q8NB90 893 aa23.52■■□□□ 1.36
GGPS1-206ENST00000488594 NEUROD6Q96NK8 337 aa23.52■■□□□ 1.36
GGPS1-206ENST00000488594 PRO3102Q9H379 93 aa23.52■■□□□ 1.36
GGPS1-206ENST00000488594 PAK6Q9NQU5 681 aaPredicted RBP23.52■■□□□ 1.36
GGPS1-206ENST00000488594 HMG20BQ9P0W2 317 aa23.52■■□□□ 1.36
GGPS1-206ENST00000488594 ZBTB7BO15156 539 aaPredicted RBP23.52■■□□□ 1.36
GGPS1-206ENST00000488594 GCLCP48506 637 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms