RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 NAA16Q6N069 864 aaPredicted RBP17.35■□□□□ 0.37
COL9A2-208ENST00000488463 MIGA2Q7L4E1 593 aa17.35■□□□□ 0.37
COL9A2-208ENST00000488463 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
COL9A2-208ENST00000488463 ELP3Q9H9T3 547 aa17.35■□□□□ 0.37
COL9A2-208ENST00000488463 SNCAIPQ9Y6H5 919 aa17.35■□□□□ 0.37
COL9A2-208ENST00000488463 COL2A1P02458 1487 aaPredicted RBP17.35■□□□□ 0.37
COL9A2-208ENST00000488463 SIPA1L1O43166 1804 aa17.35■□□□□ 0.37
COL9A2-208ENST00000488463 TRPA1O75762 1119 aa17.34■□□□□ 0.37
COL9A2-208ENST00000488463 IFIT2P09913 472 aaKnown RBP17.34■□□□□ 0.37
COL9A2-208ENST00000488463 SLURP2P0DP57 97 aa17.34■□□□□ 0.37
COL9A2-208ENST00000488463 SH3RF3Q8TEJ3 882 aaPredicted RBP17.34■□□□□ 0.37
COL9A2-208ENST00000488463 ZKSCAN4Q969J2 545 aaPredicted RBP17.34■□□□□ 0.37
COL9A2-208ENST00000488463 HOOK2Q96ED9 719 aa17.34■□□□□ 0.37
COL9A2-208ENST00000488463 PHF20L1A8MW92 1017 aa17.33■□□□□ 0.36
COL9A2-208ENST00000488463 ATP5JP18859 108 aa17.33■□□□□ 0.36
COL9A2-208ENST00000488463 INPP5BP32019 993 aa17.33■□□□□ 0.36
COL9A2-208ENST00000488463 DCAF15Q66K64 600 aa17.33■□□□□ 0.36
COL9A2-208ENST00000488463 MS4A4AQ96JQ5 239 aa17.33■□□□□ 0.36
COL9A2-208ENST00000488463 WRNIP1Q96S55 665 aa17.33■□□□□ 0.36
COL9A2-208ENST00000488463 ZNF341Q9BYN7 854 aa17.33■□□□□ 0.36
COL9A2-208ENST00000488463 AATFQ9NY61 560 aaKnown RBP eCLIP17.33■□□□□ 0.36
COL9A2-208ENST00000488463 TESPA1A2RU30 521 aaPredicted RBP17.32■□□□□ 0.36
COL9A2-208ENST00000488463 SPDYE5A6NIY4 337 aa17.32■□□□□ 0.36
COL9A2-208ENST00000488463 PICALMQ13492 652 aa17.32■□□□□ 0.36
COL9A2-208ENST00000488463 OPTNQ96CV9 577 aa17.32■□□□□ 0.36
COL9A2-208ENST00000488463 EDC3Q96F86 508 aaKnown RBP17.32■□□□□ 0.36
COL9A2-208ENST00000488463 ABHD8Q96I13 439 aa17.32■□□□□ 0.36
COL9A2-208ENST00000488463 HTTP42858 3142 aa17.32■□□□□ 0.36
COL9A2-208ENST00000488463 MANSC4A6NHS7 340 aaPredicted RBP17.31■□□□□ 0.36
COL9A2-208ENST00000488463 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL9A2-208ENST00000488463 IDH1O75874 414 aaKnown RBP17.31■□□□□ 0.36
COL9A2-208ENST00000488463 CYP7A1P22680 504 aa17.31■□□□□ 0.36
COL9A2-208ENST00000488463 DYNLL1P63167 89 aaKnown RBP17.31■□□□□ 0.36
COL9A2-208ENST00000488463 SREBF2Q12772 1141 aa17.31■□□□□ 0.36
COL9A2-208ENST00000488463 TEX11Q8IYF3 940 aa17.31■□□□□ 0.36
COL9A2-208ENST00000488463 PTPN18Q99952 460 aa17.31■□□□□ 0.36
COL9A2-208ENST00000488463 CFHR5Q9BXR6 569 aa17.31■□□□□ 0.36
COL9A2-208ENST00000488463 OSBPL5Q9H0X9 879 aaPredicted RBP17.31■□□□□ 0.36
COL9A2-208ENST00000488463 TCRBV5S4A2TA0A5A2 114 aa17.3■□□□□ 0.36
COL9A2-208ENST00000488463 INHBEP58166 350 aa17.3■□□□□ 0.36
COL9A2-208ENST00000488463 NOL9Q5SY16 702 aaKnown RBP17.3■□□□□ 0.36
COL9A2-208ENST00000488463 TMED8Q6PL24 325 aaPredicted RBP17.3■□□□□ 0.36
COL9A2-208ENST00000488463 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
COL9A2-208ENST00000488463 HAUS7Q99871 368 aa17.3■□□□□ 0.36
COL9A2-208ENST00000488463 R3HDMLQ9H3Y0 253 aa17.3■□□□□ 0.36
COL9A2-208ENST00000488463 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
COL9A2-208ENST00000488463 CSADQ9Y600 493 aa17.3■□□□□ 0.36
COL9A2-208ENST00000488463 PHIPQ8WWQ0 1821 aa17.3■□□□□ 0.36
COL9A2-208ENST00000488463 MYH7P12883 1935 aa17.29■□□□□ 0.36
COL9A2-208ENST00000488463 GOLIM4O00461 696 aa17.29■□□□□ 0.36
COL9A2-208ENST00000488463 BAG3O95817 575 aa17.29■□□□□ 0.36
COL9A2-208ENST00000488463 MAP3K12Q12852 859 aa17.29■□□□□ 0.36
COL9A2-208ENST00000488463 TTF1Q15361 905 aaPredicted RBP17.29■□□□□ 0.36
COL9A2-208ENST00000488463 ERO1BQ86YB8 467 aa17.29■□□□□ 0.36
COL9A2-208ENST00000488463 IFNL1Q8IU54 200 aa17.29■□□□□ 0.36
COL9A2-208ENST00000488463 RIOK1Q9BRS2 568 aaKnown RBP17.29■□□□□ 0.36
COL9A2-208ENST00000488463 BCL11AQ9H165 835 aa17.29■□□□□ 0.36
COL9A2-208ENST00000488463 BOLA2Q9H3K6 86 aa17.29■□□□□ 0.36
COL9A2-208ENST00000488463 DDX60LQ5H9U9 1706 aaKnown RBP17.29■□□□□ 0.36
COL9A2-208ENST00000488463 FLT1P17948 1338 aa17.28■□□□□ 0.36
COL9A2-208ENST00000488463 TBC1D12O60347 775 aa17.28■□□□□ 0.36
COL9A2-208ENST00000488463 PDE6AP16499 860 aa17.28■□□□□ 0.36
COL9A2-208ENST00000488463 PLCG2P16885 1265 aa17.28■□□□□ 0.36
COL9A2-208ENST00000488463 HDAC1Q13547 482 aaPredicted RBP17.28■□□□□ 0.36
COL9A2-208ENST00000488463 MIGA1Q8NAN2 632 aa17.28■□□□□ 0.36
COL9A2-208ENST00000488463 BRI3BPQ8WY22 251 aa17.28■□□□□ 0.36
COL9A2-208ENST00000488463 OTUD5Q96G74 571 aa17.28■□□□□ 0.36
COL9A2-208ENST00000488463 DNAJC2Q99543 621 aaKnown RBP17.28■□□□□ 0.36
COL9A2-208ENST00000488463 PAG1Q9NWQ8 432 aa17.28■□□□□ 0.36
COL9A2-208ENST00000488463 DOCK1Q14185 1865 aa17.28■□□□□ 0.36
COL9A2-208ENST00000488463 MYH1P12882 1939 aa17.27■□□□□ 0.36
COL9A2-208ENST00000488463 IRF6O14896 467 aa17.27■□□□□ 0.36
COL9A2-208ENST00000488463 TBC1D8O95759 1140 aa17.27■□□□□ 0.36
COL9A2-208ENST00000488463 PPIL2Q13356 520 aa17.27■□□□□ 0.36
COL9A2-208ENST00000488463 METTL16Q86W50 562 aaKnown RBP17.27■□□□□ 0.36
COL9A2-208ENST00000488463 TGFBRAP1Q8WUH2 860 aa17.27■□□□□ 0.36
COL9A2-208ENST00000488463 PTPRFP10586 1907 aa17.27■□□□□ 0.35
COL9A2-208ENST00000488463 SALL3Q9BXA9 1300 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 CHGBP05060 677 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 PPATQ06203 517 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 AAMPQ13685 434 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 RRP1BQ14684 758 aaKnown RBP17.26■□□□□ 0.35
COL9A2-208ENST00000488463 SLFNL1Q499Z3 407 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 NOM1Q5C9Z4 860 aaKnown RBP17.26■□□□□ 0.35
COL9A2-208ENST00000488463 SLC9C2Q5TAH2 1124 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 ZSCAN29Q8IWY8 852 aaPredicted RBP17.26■□□□□ 0.35
COL9A2-208ENST00000488463 EXOC6Q8TAG9 804 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
COL9A2-208ENST00000488463 NOL10Q9BSC4 688 aaKnown RBP17.26■□□□□ 0.35
COL9A2-208ENST00000488463 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 KCNH4Q9UQ05 1017 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
COL9A2-208ENST00000488463 ATAD5Q96QE3 1844 aa17.26■□□□□ 0.35
COL9A2-208ENST00000488463 ZNF532Q9HCE3 1301 aa17.25■□□□□ 0.35
COL9A2-208ENST00000488463 FAM196BA6NMK8 535 aa17.25■□□□□ 0.35
COL9A2-208ENST00000488463 GTF2A2P52657 109 aa17.25■□□□□ 0.35
COL9A2-208ENST00000488463 MOGSQ13724 837 aa17.25■□□□□ 0.35
COL9A2-208ENST00000488463 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
COL9A2-208ENST00000488463 DNAJC18Q9H819 358 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms