RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 M0R2C6 588 aa13.33□□□□□ -0.28
UBE4B-210ENST00000488228 PLCG2P16885 1265 aa13.33□□□□□ -0.28
UBE4B-210ENST00000488228 HSPA6P17066 643 aa13.33□□□□□ -0.28
UBE4B-210ENST00000488228 PRKG1Q13976 671 aa13.33□□□□□ -0.28
UBE4B-210ENST00000488228 CST9Q5W186 159 aa13.33□□□□□ -0.28
UBE4B-210ENST00000488228 TMED8Q6PL24 325 aaPredicted RBP13.33□□□□□ -0.28
UBE4B-210ENST00000488228 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
UBE4B-210ENST00000488228 TGFBRAP1Q8WUH2 860 aa13.33□□□□□ -0.28
UBE4B-210ENST00000488228 APPBP2Q92624 585 aa13.33□□□□□ -0.28
UBE4B-210ENST00000488228 OSBP2Q969R2 916 aa13.33□□□□□ -0.28
UBE4B-210ENST00000488228 SEC62Q99442 399 aaKnown RBP13.33□□□□□ -0.28
UBE4B-210ENST00000488228 PUS7LQ9H0K6 701 aaKnown RBP13.33□□□□□ -0.28
UBE4B-210ENST00000488228 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
UBE4B-210ENST00000488228 ZFYP08048 801 aaPredicted RBP13.32□□□□□ -0.28
UBE4B-210ENST00000488228 SLC4A8Q2Y0W8 1093 aa13.32□□□□□ -0.28
UBE4B-210ENST00000488228 MOB2Q70IA6 237 aa13.32□□□□□ -0.28
UBE4B-210ENST00000488228 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
UBE4B-210ENST00000488228 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
UBE4B-210ENST00000488228 AIDAQ96BJ3 306 aa13.32□□□□□ -0.28
UBE4B-210ENST00000488228 OSBPL5Q9H0X9 879 aaPredicted RBP13.32□□□□□ -0.28
UBE4B-210ENST00000488228 SAP30BPQ9UHR5 308 aaKnown RBP13.32□□□□□ -0.28
UBE4B-210ENST00000488228 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 DDTLA6NHG4 134 aaPredicted RBP13.31□□□□□ -0.28
UBE4B-210ENST00000488228 TMEM88BA6NKF7 163 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 PRKAB2O43741 272 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 ENTPD3O75355 529 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 SDSP20132 328 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 NMIQ13287 307 aaPredicted RBP13.31□□□□□ -0.28
UBE4B-210ENST00000488228 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
UBE4B-210ENST00000488228 ZMYM1Q5SVZ6 1142 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 CCDC129Q6ZRS4 1044 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 SDR42E1Q8WUS8 393 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
UBE4B-210ENST00000488228 GBA2Q9HCG7 927 aaPredicted RBP13.31□□□□□ -0.28
UBE4B-210ENST00000488228 ABT1Q9ULW3 272 aaKnown RBP13.31□□□□□ -0.28
UBE4B-210ENST00000488228 PHIPQ8WWQ0 1821 aa13.31□□□□□ -0.28
UBE4B-210ENST00000488228 GPAA1O43292 621 aa13.3□□□□□ -0.28
UBE4B-210ENST00000488228 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
UBE4B-210ENST00000488228 NF2P35240 595 aa13.3□□□□□ -0.28
UBE4B-210ENST00000488228 USP5P45974 858 aa13.3□□□□□ -0.28
UBE4B-210ENST00000488228 LRRFIP1Q32MZ4 808 aaKnown RBP13.3□□□□□ -0.28
UBE4B-210ENST00000488228 CERS3Q8IU89 383 aa13.3□□□□□ -0.28
UBE4B-210ENST00000488228 ZSCAN29Q8IWY8 852 aaPredicted RBP13.3□□□□□ -0.28
UBE4B-210ENST00000488228 CSRNP1Q96S65 589 aa13.3□□□□□ -0.28
UBE4B-210ENST00000488228 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
UBE4B-210ENST00000488228 PTPRFP10586 1907 aa13.3□□□□□ -0.28
UBE4B-210ENST00000488228 FAM196BA6NMK8 535 aa13.29□□□□□ -0.28
UBE4B-210ENST00000488228 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
UBE4B-210ENST00000488228 EVX2Q03828 476 aa13.29□□□□□ -0.28
UBE4B-210ENST00000488228 SUPT20HL1Q3ZLR7 823 aa13.29□□□□□ -0.28
UBE4B-210ENST00000488228 DIAPH3Q9NSV4 1193 aa13.29□□□□□ -0.28
UBE4B-210ENST00000488228 ANGEL1Q9UNK9 670 aaKnown RBP13.29□□□□□ -0.28
UBE4B-210ENST00000488228 SLC4A4Q9Y6R1 1079 aa13.29□□□□□ -0.28
UBE4B-210ENST00000488228 CEP350Q5VT06 3117 aa13.29□□□□□ -0.28
UBE4B-210ENST00000488228 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
UBE4B-210ENST00000488228 HUNKP57058 714 aa13.28□□□□□ -0.28
UBE4B-210ENST00000488228 MIGA2Q7L4E1 593 aa13.28□□□□□ -0.28
UBE4B-210ENST00000488228 ZNF589Q86UQ0 364 aaPredicted RBP13.28□□□□□ -0.28
UBE4B-210ENST00000488228 C2orf69Q8N8R5 385 aa13.28□□□□□ -0.28
UBE4B-210ENST00000488228 STRBPQ96SI9 672 aaKnown RBP13.28□□□□□ -0.28
UBE4B-210ENST00000488228 EPB41L4AQ9HCS5 686 aaPredicted RBP13.28□□□□□ -0.28
UBE4B-210ENST00000488228 DCP1AQ9NPI6 582 aaPredicted RBP13.28□□□□□ -0.28
UBE4B-210ENST00000488228 PALD1Q9ULE6 856 aa13.28□□□□□ -0.28
UBE4B-210ENST00000488228 TLL2Q9Y6L7 1015 aa13.28□□□□□ -0.28
UBE4B-210ENST00000488228 CYP2D6P10635 497 aa13.27□□□□□ -0.29
UBE4B-210ENST00000488228 CWC27Q6UX04 472 aaKnown RBP13.27□□□□□ -0.29
UBE4B-210ENST00000488228 SAPCD2Q86UD0 394 aa13.27□□□□□ -0.29
UBE4B-210ENST00000488228 IL25Q9H293 177 aa13.27□□□□□ -0.29
UBE4B-210ENST00000488228 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.27□□□□□ -0.29
UBE4B-210ENST00000488228 MKRN1Q9UHC7 482 aaKnown RBP13.27□□□□□ -0.29
UBE4B-210ENST00000488228 CYP2D7A0A087X1C5 515 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 SMIM22K7EJ46 135 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 FOXP2O15409 715 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 PPP1R12BO60237 982 aaPredicted RBP13.26□□□□□ -0.29
UBE4B-210ENST00000488228 FKBP1BP68106 108 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 GRM1Q13255 1194 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 BMP2KLQ5H9B9 411 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 VPS53Q5VIR6 699 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 DCAF15Q66K64 600 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 CCDC171Q6TFL3 1326 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 PAXIP1Q6ZW49 1069 aaPredicted RBP13.26□□□□□ -0.29
UBE4B-210ENST00000488228 ARMC9Q7Z3E5 817 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 CLMNQ96JQ2 1002 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 WRNIP1Q96S55 665 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 GREB1LQ9C091 1923 aaPredicted RBP13.26□□□□□ -0.29
UBE4B-210ENST00000488228 DNAJC18Q9H819 358 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 HELLSQ9NRZ9 838 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 MCM9Q9NXL9 1143 aa13.26□□□□□ -0.29
UBE4B-210ENST00000488228 RASSF10A6NK89 507 aa13.25□□□□□ -0.29
UBE4B-210ENST00000488228 GSG1L2A8MUP6 293 aa13.25□□□□□ -0.29
UBE4B-210ENST00000488228 USP2O75604 605 aaPredicted RBP13.25□□□□□ -0.29
UBE4B-210ENST00000488228 IREB2P48200 963 aaKnown RBP13.25□□□□□ -0.29
UBE4B-210ENST00000488228 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBE4B-210ENST00000488228 HOOK2Q96ED9 719 aa13.25□□□□□ -0.29
UBE4B-210ENST00000488228 ZNF341Q9BYN7 854 aa13.25□□□□□ -0.29
UBE4B-210ENST00000488228 DHX36Q9H2U1 1008 aaKnown RBP13.25□□□□□ -0.29
UBE4B-210ENST00000488228 HIP1O00291 1037 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 POLR3DP05423 398 aaPredicted RBP13.24□□□□□ -0.29
UBE4B-210ENST00000488228 HLA-DOAP06340 250 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms