RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CREB3L3Q68CJ9 461 aa16.04■□□□□ 0.16
COPS7B-221ENST00000488111 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
COPS7B-221ENST00000488111 PSMD1Q99460 953 aa16.04■□□□□ 0.16
COPS7B-221ENST00000488111 SNX14Q9Y5W7 946 aa16.04■□□□□ 0.16
COPS7B-221ENST00000488111 TAF6LQ9Y6J9 622 aa16.04■□□□□ 0.16
COPS7B-221ENST00000488111 DOCK2Q92608 1830 aa16.03■□□□□ 0.16
COPS7B-221ENST00000488111 PRKAB2O43741 272 aa16.03■□□□□ 0.16
COPS7B-221ENST00000488111 APPP05067 770 aa16.03■□□□□ 0.16
COPS7B-221ENST00000488111 GABPB1Q06547 395 aaPredicted RBP16.03■□□□□ 0.16
COPS7B-221ENST00000488111 SOGA3Q5TF21 947 aa16.03■□□□□ 0.16
COPS7B-221ENST00000488111 CERS5Q8N5B7 392 aa16.03■□□□□ 0.16
COPS7B-221ENST00000488111 FAM205AQ6ZU69 1335 aa16.03■□□□□ 0.16
COPS7B-221ENST00000488111 MYH13Q9UKX3 1938 aa16.03■□□□□ 0.16
COPS7B-221ENST00000488111 SLC27A2O14975 620 aa16.02■□□□□ 0.16
COPS7B-221ENST00000488111 GRIPAP1Q4V328 841 aa16.02■□□□□ 0.16
COPS7B-221ENST00000488111 LARGE2Q8N3Y3 721 aa16.02■□□□□ 0.16
COPS7B-221ENST00000488111 DSCC1Q9BVC3 393 aa16.02■□□□□ 0.16
COPS7B-221ENST00000488111 MYH7P12883 1935 aa16.02■□□□□ 0.16
COPS7B-221ENST00000488111 MAGEB6P1A0A0J9YX57 407 aa16.02■□□□□ 0.15
COPS7B-221ENST00000488111 AP5Z1O43299 807 aa16.02■□□□□ 0.15
COPS7B-221ENST00000488111 TMEM51Q9NW97 253 aa16.02■□□□□ 0.15
COPS7B-221ENST00000488111 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.15
COPS7B-221ENST00000488111 CHD4Q14839 1912 aa16.02■□□□□ 0.15
COPS7B-221ENST00000488111 YDJCA8MPS7 323 aa16.01■□□□□ 0.15
COPS7B-221ENST00000488111 UBE2HP62256 183 aa16.01■□□□□ 0.15
COPS7B-221ENST00000488111 NCBP1Q09161 790 aaKnown RBP16.01■□□□□ 0.15
COPS7B-221ENST00000488111 TBC1D22AQ8WUA7 517 aa16.01■□□□□ 0.15
COPS7B-221ENST00000488111 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
COPS7B-221ENST00000488111 FGAP02671 866 aa16.01■□□□□ 0.15
COPS7B-221ENST00000488111 PDE4CQ08493 712 aa16.01■□□□□ 0.15
COPS7B-221ENST00000488111 ADCK5Q3MIX3 580 aa16.01■□□□□ 0.15
COPS7B-221ENST00000488111 FOXD4L6Q3SYB3 417 aaPredicted RBP16.01■□□□□ 0.15
COPS7B-221ENST00000488111 FOXD4L3Q6VB84 417 aaPredicted RBP16.01■□□□□ 0.15
COPS7B-221ENST00000488111 RIOK1Q9BRS2 568 aaKnown RBP16.01■□□□□ 0.15
COPS7B-221ENST00000488111 SLC4A4Q9Y6R1 1079 aa16.01■□□□□ 0.15
COPS7B-221ENST00000488111 NFKBIEO00221 500 aa16■□□□□ 0.15
COPS7B-221ENST00000488111 CYP21A2P08686 494 aa16■□□□□ 0.15
COPS7B-221ENST00000488111 UPF3BQ9BZI7 483 aaKnown RBP16■□□□□ 0.15
COPS7B-221ENST00000488111 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
COPS7B-221ENST00000488111 CTNNA3Q9UI47 895 aa16■□□□□ 0.15
COPS7B-221ENST00000488111 CPA1P15085 419 aa16■□□□□ 0.15
COPS7B-221ENST00000488111 HAND2P61296 217 aa16■□□□□ 0.15
COPS7B-221ENST00000488111 SDR42E1Q8WUS8 393 aa16■□□□□ 0.15
COPS7B-221ENST00000488111 SYT17Q9BSW7 474 aa16■□□□□ 0.15
COPS7B-221ENST00000488111 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
COPS7B-221ENST00000488111 ZKSCAN1P17029 563 aaPredicted RBP15.99■□□□□ 0.15
COPS7B-221ENST00000488111 IARSP41252 1262 aaKnown RBP15.99■□□□□ 0.15
COPS7B-221ENST00000488111 RASSF7Q02833 373 aa15.99■□□□□ 0.15
COPS7B-221ENST00000488111 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
COPS7B-221ENST00000488111 ZNF771Q7L3S4 317 aaPredicted RBP15.99■□□□□ 0.15
COPS7B-221ENST00000488111 CNPY2Q9Y2B0 182 aa15.99■□□□□ 0.15
COPS7B-221ENST00000488111 USP17L3A6NCW0 530 aa15.99■□□□□ 0.15
COPS7B-221ENST00000488111 USP17L4A6NCW7 530 aa15.99■□□□□ 0.15
COPS7B-221ENST00000488111 PATL2C9JE40 543 aaKnown RBP15.99■□□□□ 0.15
COPS7B-221ENST00000488111 IGSF3O75054 1194 aa15.99■□□□□ 0.15
COPS7B-221ENST00000488111 RAD17O75943 681 aa15.99■□□□□ 0.15
COPS7B-221ENST00000488111 RNF20Q5VTR2 975 aa15.99■□□□□ 0.15
COPS7B-221ENST00000488111 NOL8Q76FK4 1167 aaKnown RBP15.99■□□□□ 0.15
COPS7B-221ENST00000488111 USP17L1Q7RTZ2 530 aa15.99■□□□□ 0.15
COPS7B-221ENST00000488111 TTF2Q9UNY4 1162 aaKnown RBP15.99■□□□□ 0.15
COPS7B-221ENST00000488111 BRCA1P38398 1863 aaKnown RBP15.98■□□□□ 0.15
COPS7B-221ENST00000488111 GSG1L2A8MUP6 293 aa15.98■□□□□ 0.15
COPS7B-221ENST00000488111 SCNN1DP51172 638 aa15.98■□□□□ 0.15
COPS7B-221ENST00000488111 DACT2Q5SW24 774 aa15.98■□□□□ 0.15
COPS7B-221ENST00000488111 STRIP1Q5VSL9 837 aa15.98■□□□□ 0.15
COPS7B-221ENST00000488111 KIAA0825Q8IV33 1275 aa15.98■□□□□ 0.15
COPS7B-221ENST00000488111 IFNL3Q8IZI9 196 aa15.98■□□□□ 0.15
COPS7B-221ENST00000488111 KCNB2Q92953 911 aa15.98■□□□□ 0.15
COPS7B-221ENST00000488111 JAKMIP1Q96N16 626 aaKnown RBP15.98■□□□□ 0.15
COPS7B-221ENST00000488111 EPB41L4AQ9HCS5 686 aaPredicted RBP15.98■□□□□ 0.15
COPS7B-221ENST00000488111 COL4A5P29400 1685 aa15.98■□□□□ 0.15
COPS7B-221ENST00000488111 PDIA4P13667 645 aaKnown RBP15.98■□□□□ 0.15
COPS7B-221ENST00000488111 GSTO1P78417 241 aa15.98■□□□□ 0.15
COPS7B-221ENST00000488111 DDX41Q9UJV9 622 aaKnown RBP15.98■□□□□ 0.15
COPS7B-221ENST00000488111 ZSCAN22P10073 491 aaPredicted RBP15.97■□□□□ 0.15
COPS7B-221ENST00000488111 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
COPS7B-221ENST00000488111 CASTP20810 708 aaKnown RBP15.97■□□□□ 0.15
COPS7B-221ENST00000488111 NIM1KQ8IY84 436 aa15.97■□□□□ 0.15
COPS7B-221ENST00000488111 CGNQ9P2M7 1197 aaKnown RBP15.97■□□□□ 0.15
COPS7B-221ENST00000488111 MROH7-TTC4A0A0A0MT08 1334 aa15.96■□□□□ 0.15
COPS7B-221ENST00000488111 LDHCP07864 332 aa15.96■□□□□ 0.15
COPS7B-221ENST00000488111 SLFN14P0C7P3 912 aa15.96■□□□□ 0.15
COPS7B-221ENST00000488111 STOX1Q6ZVD7 989 aa15.96■□□□□ 0.15
COPS7B-221ENST00000488111 SH3RF3Q8TEJ3 882 aaPredicted RBP15.96■□□□□ 0.15
COPS7B-221ENST00000488111 NAPBQ9H115 298 aa15.96■□□□□ 0.15
COPS7B-221ENST00000488111 MORC2Q9Y6X9 1032 aaPredicted RBP15.96■□□□□ 0.15
COPS7B-221ENST00000488111 SCN9AQ15858 1988 aa15.96■□□□□ 0.15
COPS7B-221ENST00000488111 GNAT2P19087 354 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 BTDP43251 543 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 TDO2P48775 406 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 PRELPP51888 382 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 GIMAP6Q6P9H5 292 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 STK11IPQ8N1F8 1099 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 ZNF213O14771 459 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 IMMTQ16891 758 aaKnown RBP15.95■□□□□ 0.14
COPS7B-221ENST00000488111 ARHGAP27Q6ZUM4 889 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 VPS33BQ9H267 617 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 ZNRF3Q9ULT6 936 aa15.95■□□□□ 0.14
COPS7B-221ENST00000488111 PSMD14O00487 310 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 BAG3O95817 575 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms