RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 TEX11Q8IYF3 940 aa28.82■■■□□ 2.2
RHBDD3-205ENST00000488106 MAGEB6Q8N7X4 407 aa28.82■■■□□ 2.2
RHBDD3-205ENST00000488106 SH3RF3Q8TEJ3 882 aaPredicted RBP28.82■■■□□ 2.2
RHBDD3-205ENST00000488106 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.82■■■□□ 2.2
RHBDD3-205ENST00000488106 UNCXA6NJT0 531 aa28.81■■■□□ 2.2
RHBDD3-205ENST00000488106 GOLIM4O00461 696 aa28.81■■■□□ 2.2
RHBDD3-205ENST00000488106 MAP3K12Q12852 859 aa28.81■■■□□ 2.2
RHBDD3-205ENST00000488106 COL13A1Q5TAT6 717 aaPredicted RBP28.81■■■□□ 2.2
RHBDD3-205ENST00000488106 BOLA2Q9H3K6 86 aa28.81■■■□□ 2.2
RHBDD3-205ENST00000488106 CSADQ9Y600 493 aa28.81■■■□□ 2.2
RHBDD3-205ENST00000488106 BAG3O95817 575 aa28.8■■■□□ 2.2
RHBDD3-205ENST00000488106 MAP3K9P80192 1104 aa28.8■■■□□ 2.2
RHBDD3-205ENST00000488106 TTF1Q15361 905 aaPredicted RBP28.8■■■□□ 2.2
RHBDD3-205ENST00000488106 SH3BP5LQ7L8J4 393 aa28.8■■■□□ 2.2
RHBDD3-205ENST00000488106 EDC3Q96F86 508 aaKnown RBP28.8■■■□□ 2.2
RHBDD3-205ENST00000488106 ZNF341Q9BYN7 854 aa28.8■■■□□ 2.2
RHBDD3-205ENST00000488106 PTPRFP10586 1907 aa28.79■■■□□ 2.2
RHBDD3-205ENST00000488106 MYH8P13535 1937 aa28.79■■■□□ 2.2
RHBDD3-205ENST00000488106 BAZ2AQ9UIF9 1905 aaKnown RBP28.79■■■□□ 2.2
RHBDD3-205ENST00000488106 PHIPQ8WWQ0 1821 aa28.79■■■□□ 2.2
RHBDD3-205ENST00000488106 CA12O43570 354 aa28.79■■■□□ 2.2
RHBDD3-205ENST00000488106 ATP5JP18859 108 aa28.79■■■□□ 2.2
RHBDD3-205ENST00000488106 EXOC6Q8TAG9 804 aa28.79■■■□□ 2.2
RHBDD3-205ENST00000488106 ATRNL1Q5VV63 1379 aa28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 DDX60LQ5H9U9 1706 aaKnown RBP28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 DDTLA6NHG4 134 aaPredicted RBP28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 IGSF3O75054 1194 aa28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 MAP4K4O95819 1239 aaPredicted RBP28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 ZBTB48P10074 688 aaPredicted RBP28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 REM2Q8IYK8 340 aaPredicted RBP28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 MIGA1Q8NAN2 632 aa28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 ZKSCAN4Q969J2 545 aaPredicted RBP28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 OPTNQ96CV9 577 aa28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 COL2A1P02458 1487 aaPredicted RBP28.78■■■□□ 2.2
RHBDD3-205ENST00000488106 PLCG2P16885 1265 aa28.77■■■□□ 2.2
RHBDD3-205ENST00000488106 GJA5P36382 358 aa28.77■■■□□ 2.2
RHBDD3-205ENST00000488106 DYNLL1P63167 89 aaKnown RBP28.77■■■□□ 2.2
RHBDD3-205ENST00000488106 CNKSR2Q8WXI2 1034 aa28.77■■■□□ 2.2
RHBDD3-205ENST00000488106 PAG1Q9NWQ8 432 aa28.77■■■□□ 2.2
RHBDD3-205ENST00000488106 RNF186Q9NXI6 227 aa28.77■■■□□ 2.2
RHBDD3-205ENST00000488106 TRPA1O75762 1119 aa28.76■■■□□ 2.19
RHBDD3-205ENST00000488106 SREBF2Q12772 1141 aa28.76■■■□□ 2.19
RHBDD3-205ENST00000488106 SNCAIPQ9Y6H5 919 aa28.76■■■□□ 2.19
RHBDD3-205ENST00000488106 INPP5BP32019 993 aa28.75■■■□□ 2.19
RHBDD3-205ENST00000488106 PPP4CP60510 307 aa28.75■■■□□ 2.19
RHBDD3-205ENST00000488106 TSHZ3Q63HK5 1081 aa28.75■■■□□ 2.19
RHBDD3-205ENST00000488106 OTUD5Q96G74 571 aa28.75■■■□□ 2.19
RHBDD3-205ENST00000488106 GPATCH3Q96I76 525 aa28.75■■■□□ 2.19
RHBDD3-205ENST00000488106 HAUS7Q99871 368 aa28.75■■■□□ 2.19
RHBDD3-205ENST00000488106 OSBPL5Q9H0X9 879 aaPredicted RBP28.75■■■□□ 2.19
RHBDD3-205ENST00000488106 PRDM10Q9NQV6 1147 aa28.75■■■□□ 2.19
RHBDD3-205ENST00000488106 NPM3O75607 178 aaKnown RBP28.74■■■□□ 2.19
RHBDD3-205ENST00000488106 SLURP2P0DP57 97 aa28.74■■■□□ 2.19
RHBDD3-205ENST00000488106 PDE6AP16499 860 aa28.74■■■□□ 2.19
RHBDD3-205ENST00000488106 AAMPQ13685 434 aa28.74■■■□□ 2.19
RHBDD3-205ENST00000488106 MAPKAPK5Q8IW41 473 aa28.74■■■□□ 2.19
RHBDD3-205ENST00000488106 TGFBRAP1Q8WUH2 860 aa28.74■■■□□ 2.19
RHBDD3-205ENST00000488106 ECHDC1Q9NTX5 307 aa28.74■■■□□ 2.19
RHBDD3-205ENST00000488106 SAGE1Q9NXZ1 904 aa28.74■■■□□ 2.19
RHBDD3-205ENST00000488106 HDAC1Q13547 482 aaPredicted RBP28.73■■■□□ 2.19
RHBDD3-205ENST00000488106 SLC9C2Q5TAH2 1124 aa28.73■■■□□ 2.19
RHBDD3-205ENST00000488106 FLT1P17948 1338 aa28.72■■■□□ 2.19
RHBDD3-205ENST00000488106 MANSC4A6NHS7 340 aaPredicted RBP28.72■■■□□ 2.19
RHBDD3-205ENST00000488106 TM4SF4P48230 202 aa28.72■■■□□ 2.19
RHBDD3-205ENST00000488106 ZNF532Q9HCE3 1301 aa28.71■■■□□ 2.19
RHBDD3-205ENST00000488106 SPDYE5A6NIY4 337 aa28.71■■■□□ 2.19
RHBDD3-205ENST00000488106 IRX6P78412 446 aaPredicted RBP28.71■■■□□ 2.19
RHBDD3-205ENST00000488106 ZNF112Q9UJU3 913 aa28.71■■■□□ 2.19
RHBDD3-205ENST00000488106 FAM196BA6NMK8 535 aa28.7■■■□□ 2.18
RHBDD3-205ENST00000488106 TMED8Q6PL24 325 aaPredicted RBP28.7■■■□□ 2.18
RHBDD3-205ENST00000488106 ZBTB47Q9UFB7 747 aaPredicted RBP28.7■■■□□ 2.18
RHBDD3-205ENST00000488106 ANKRD45Q5TZF3 282 aa28.69■■■□□ 2.18
RHBDD3-205ENST00000488106 ERO1BQ86YB8 467 aa28.69■■■□□ 2.18
RHBDD3-205ENST00000488106 OTUD7AQ8TE49 926 aaPredicted RBP28.69■■■□□ 2.18
RHBDD3-205ENST00000488106 GCC1Q96CN9 775 aa28.69■■■□□ 2.18
RHBDD3-205ENST00000488106 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.69■■■□□ 2.18
RHBDD3-205ENST00000488106 MAGEB6P1A0A0J9YX57 407 aa28.68■■■□□ 2.18
RHBDD3-205ENST00000488106 SLC4A8Q2Y0W8 1093 aa28.68■■■□□ 2.18
RHBDD3-205ENST00000488106 SAP30BPQ9UHR5 308 aaKnown RBP28.68■■■□□ 2.18
RHBDD3-205ENST00000488106 TCRBV5S4A2TA0A5A2 114 aa28.67■■■□□ 2.18
RHBDD3-205ENST00000488106 PHF20L1A8MW92 1017 aa28.67■■■□□ 2.18
RHBDD3-205ENST00000488106 USP5P45974 858 aa28.67■■■□□ 2.18
RHBDD3-205ENST00000488106 SLFNL1Q499Z3 407 aa28.67■■■□□ 2.18
RHBDD3-205ENST00000488106 CERS3Q8IU89 383 aa28.67■■■□□ 2.18
RHBDD3-205ENST00000488106 IGF2BP3O00425 579 aaKnown RBP eCLIP28.66■■■□□ 2.18
RHBDD3-205ENST00000488106 NOL9Q5SY16 702 aaKnown RBP28.66■■■□□ 2.18
RHBDD3-205ENST00000488106 IFNL1Q8IU54 200 aa28.66■■■□□ 2.18
RHBDD3-205ENST00000488106 RIOK1Q9BRS2 568 aaKnown RBP28.66■■■□□ 2.18
RHBDD3-205ENST00000488106 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.66■■■□□ 2.18
RHBDD3-205ENST00000488106 TBC1D8O95759 1140 aa28.65■■■□□ 2.18
RHBDD3-205ENST00000488106 ADD2P35612 726 aa28.65■■■□□ 2.18
RHBDD3-205ENST00000488106 INHBEP58166 350 aa28.65■■■□□ 2.18
RHBDD3-205ENST00000488106 PPIL2Q13356 520 aa28.65■■■□□ 2.18
RHBDD3-205ENST00000488106 TNS4Q8IZW8 715 aa28.65■■■□□ 2.18
RHBDD3-205ENST00000488106 DHX36Q9H2U1 1008 aaKnown RBP28.65■■■□□ 2.18
RHBDD3-205ENST00000488106 RWDD1Q9H446 243 aaPredicted RBP28.65■■■□□ 2.18
RHBDD3-205ENST00000488106 PALD1Q9ULE6 856 aa28.65■■■□□ 2.18
RHBDD3-205ENST00000488106 TTC41PQ6P2S7 1318 aa28.65■■■□□ 2.18
RHBDD3-205ENST00000488106 CCL15-CCL14A0A0B4J2E2 113 aa28.64■■■□□ 2.18
RHBDD3-205ENST00000488106 IRF6O14896 467 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms