RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 AATFQ9NY61 560 aaKnown RBP eCLIP20.76■□□□□ 0.91
HMG20B-212ENST00000487894 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.76■□□□□ 0.91
HMG20B-212ENST00000487894 SUPT16HQ9Y5B9 1047 aaKnown RBP20.76■□□□□ 0.91
HMG20B-212ENST00000487894 PHIPQ8WWQ0 1821 aa20.76■□□□□ 0.91
HMG20B-212ENST00000487894 CA12O43570 354 aa20.75■□□□□ 0.91
HMG20B-212ENST00000487894 ZBTB48P10074 688 aaPredicted RBP20.75■□□□□ 0.91
HMG20B-212ENST00000487894 ATP5JP18859 108 aa20.75■□□□□ 0.91
HMG20B-212ENST00000487894 GJA5P36382 358 aa20.75■□□□□ 0.91
HMG20B-212ENST00000487894 AAMPQ13685 434 aa20.75■□□□□ 0.91
HMG20B-212ENST00000487894 VGLL4Q14135 290 aa20.75■□□□□ 0.91
HMG20B-212ENST00000487894 REM2Q8IYK8 340 aaPredicted RBP20.75■□□□□ 0.91
HMG20B-212ENST00000487894 SH3RF3Q8TEJ3 882 aaPredicted RBP20.75■□□□□ 0.91
HMG20B-212ENST00000487894 WRNIP1Q96S55 665 aa20.75■□□□□ 0.91
HMG20B-212ENST00000487894 DNAJC2Q99543 621 aaKnown RBP20.75■□□□□ 0.91
HMG20B-212ENST00000487894 NOL10Q9BSC4 688 aaKnown RBP20.75■□□□□ 0.91
HMG20B-212ENST00000487894 ELP3Q9H9T3 547 aa20.75■□□□□ 0.91
HMG20B-212ENST00000487894 RTN4Q9NQC3 1192 aaKnown RBP20.75■□□□□ 0.91
HMG20B-212ENST00000487894 TSKSQ9UJT2 592 aa20.75■□□□□ 0.91
HMG20B-212ENST00000487894 DDTLA6NHG4 134 aaPredicted RBP20.74■□□□□ 0.91
HMG20B-212ENST00000487894 CYP7A1P22680 504 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 LBX1P52954 281 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 PPP4CP60510 307 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 MAP3K9P80192 1104 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 MAP3K12Q12852 859 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 TTF1Q15361 905 aaPredicted RBP20.74■□□□□ 0.91
HMG20B-212ENST00000487894 MIGA2Q7L4E1 593 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 TEX11Q8IYF3 940 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 MAGEB6Q8N7X4 407 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 EDC3Q96F86 508 aaKnown RBP20.74■□□□□ 0.91
HMG20B-212ENST00000487894 ZNF341Q9BYN7 854 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 BOLA2Q9H3K6 86 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 PTPRFP10586 1907 aa20.74■□□□□ 0.91
HMG20B-212ENST00000487894 GOLIM4O00461 696 aa20.73■□□□□ 0.91
HMG20B-212ENST00000487894 BAG3O95817 575 aa20.73■□□□□ 0.91
HMG20B-212ENST00000487894 EXOC6Q8TAG9 804 aa20.73■□□□□ 0.91
HMG20B-212ENST00000487894 CNKSR2Q8WXI2 1034 aa20.73■□□□□ 0.91
HMG20B-212ENST00000487894 OSBPL5Q9H0X9 879 aaPredicted RBP20.73■□□□□ 0.91
HMG20B-212ENST00000487894 SNCAIPQ9Y6H5 919 aa20.73■□□□□ 0.91
HMG20B-212ENST00000487894 PLCG2P16885 1265 aa20.72■□□□□ 0.91
HMG20B-212ENST00000487894 DYNLL1P63167 89 aaKnown RBP20.72■□□□□ 0.91
HMG20B-212ENST00000487894 HDAC1Q13547 482 aaPredicted RBP20.72■□□□□ 0.91
HMG20B-212ENST00000487894 TMED8Q6PL24 325 aaPredicted RBP20.72■□□□□ 0.91
HMG20B-212ENST00000487894 ZSCAN29Q8IWY8 852 aaPredicted RBP20.72■□□□□ 0.91
HMG20B-212ENST00000487894 OPTNQ96CV9 577 aa20.72■□□□□ 0.91
HMG20B-212ENST00000487894 HAUS7Q99871 368 aa20.72■□□□□ 0.91
HMG20B-212ENST00000487894 PRDM10Q9NQV6 1147 aa20.72■□□□□ 0.91
HMG20B-212ENST00000487894 PAG1Q9NWQ8 432 aa20.72■□□□□ 0.91
HMG20B-212ENST00000487894 SAGE1Q9NXZ1 904 aa20.72■□□□□ 0.91
HMG20B-212ENST00000487894 ZNF112Q9UJU3 913 aa20.72■□□□□ 0.91
HMG20B-212ENST00000487894 CSADQ9Y600 493 aa20.72■□□□□ 0.91
HMG20B-212ENST00000487894 INPP5BP32019 993 aa20.71■□□□□ 0.91
HMG20B-212ENST00000487894 TM4SF4P48230 202 aa20.71■□□□□ 0.91
HMG20B-212ENST00000487894 ZKSCAN4Q969J2 545 aaPredicted RBP20.71■□□□□ 0.91
HMG20B-212ENST00000487894 ECHDC1Q9NTX5 307 aa20.71■□□□□ 0.91
HMG20B-212ENST00000487894 RNF186Q9NXI6 227 aa20.71■□□□□ 0.91
HMG20B-212ENST00000487894 SLURP2P0DP57 97 aa20.7■□□□□ 0.9
HMG20B-212ENST00000487894 PDE6AP16499 860 aa20.7■□□□□ 0.9
HMG20B-212ENST00000487894 SREBF2Q12772 1141 aa20.7■□□□□ 0.9
HMG20B-212ENST00000487894 MIGA1Q8NAN2 632 aa20.7■□□□□ 0.9
HMG20B-212ENST00000487894 FLT1P17948 1338 aa20.7■□□□□ 0.9
HMG20B-212ENST00000487894 BAZ2AQ9UIF9 1905 aaKnown RBP20.69■□□□□ 0.9
HMG20B-212ENST00000487894 MANSC4A6NHS7 340 aaPredicted RBP20.69■□□□□ 0.9
HMG20B-212ENST00000487894 SPDYE5A6NIY4 337 aa20.69■□□□□ 0.9
HMG20B-212ENST00000487894 TRPA1O75762 1119 aa20.69■□□□□ 0.9
HMG20B-212ENST00000487894 MAP3K10Q02779 954 aa20.69■□□□□ 0.9
HMG20B-212ENST00000487894 TSHZ3Q63HK5 1081 aa20.69■□□□□ 0.9
HMG20B-212ENST00000487894 TGFBRAP1Q8WUH2 860 aa20.69■□□□□ 0.9
HMG20B-212ENST00000487894 TCRBV5S4A2TA0A5A2 114 aa20.68■□□□□ 0.9
HMG20B-212ENST00000487894 NOL9Q5SY16 702 aaKnown RBP20.68■□□□□ 0.9
HMG20B-212ENST00000487894 SLC9C2Q5TAH2 1124 aa20.68■□□□□ 0.9
HMG20B-212ENST00000487894 MAPKAPK5Q8IW41 473 aa20.68■□□□□ 0.9
HMG20B-212ENST00000487894 GCC1Q96CN9 775 aa20.68■□□□□ 0.9
HMG20B-212ENST00000487894 OTUD5Q96G74 571 aa20.68■□□□□ 0.9
HMG20B-212ENST00000487894 GPATCH3Q96I76 525 aa20.68■□□□□ 0.9
HMG20B-212ENST00000487894 ZNF532Q9HCE3 1301 aa20.68■□□□□ 0.9
HMG20B-212ENST00000487894 MYH8P13535 1937 aa20.68■□□□□ 0.9
HMG20B-212ENST00000487894 PHF20L1A8MW92 1017 aa20.67■□□□□ 0.9
HMG20B-212ENST00000487894 CERS3Q8IU89 383 aa20.67■□□□□ 0.9
HMG20B-212ENST00000487894 OTUD7AQ8TE49 926 aaPredicted RBP20.67■□□□□ 0.9
HMG20B-212ENST00000487894 RIOK1Q9BRS2 568 aaKnown RBP20.67■□□□□ 0.9
HMG20B-212ENST00000487894 SALL3Q9BXA9 1300 aa20.67■□□□□ 0.9
HMG20B-212ENST00000487894 ERO1BQ86YB8 467 aa20.66■□□□□ 0.9
HMG20B-212ENST00000487894 TTC41PQ6P2S7 1318 aa20.66■□□□□ 0.9
HMG20B-212ENST00000487894 FAM196BA6NMK8 535 aa20.65■□□□□ 0.9
HMG20B-212ENST00000487894 IGF2BP3O00425 579 aaKnown RBP eCLIP20.65■□□□□ 0.9
HMG20B-212ENST00000487894 TBC1D12O60347 775 aa20.65■□□□□ 0.9
HMG20B-212ENST00000487894 ADD2P35612 726 aa20.65■□□□□ 0.9
HMG20B-212ENST00000487894 INHBEP58166 350 aa20.65■□□□□ 0.9
HMG20B-212ENST00000487894 IFNL1Q8IU54 200 aa20.65■□□□□ 0.9
HMG20B-212ENST00000487894 MS4A4AQ96JQ5 239 aa20.65■□□□□ 0.9
HMG20B-212ENST00000487894 MAGEB6P1A0A0J9YX57 407 aa20.64■□□□□ 0.89
HMG20B-212ENST00000487894 TESPA1A2RU30 521 aaPredicted RBP20.64■□□□□ 0.89
HMG20B-212ENST00000487894 PPIL2Q13356 520 aa20.64■□□□□ 0.89
HMG20B-212ENST00000487894 SLFNL1Q499Z3 407 aa20.64■□□□□ 0.89
HMG20B-212ENST00000487894 ANKRD45Q5TZF3 282 aa20.64■□□□□ 0.89
HMG20B-212ENST00000487894 PI4K2BQ8TCG2 481 aa20.64■□□□□ 0.89
HMG20B-212ENST00000487894 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.64■□□□□ 0.894e-11■■■□□ 17.3
HMG20B-212ENST00000487894 DHX36Q9H2U1 1008 aaKnown RBP20.64■□□□□ 0.89
HMG20B-212ENST00000487894 IRF6O14896 467 aa20.63■□□□□ 0.89
HMG20B-212ENST00000487894 CHGBP05060 677 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms