RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 IGHMBP2P38935 993 aaKnown RBP14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 SLC4A4Q9Y6R1 1079 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 PCDH11XQ9BZA7 1347 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 PCDH11YQ9BZA8 1340 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.08□□□□□ -0.15
SHROOM3-208ENST00000486758 TSR1Q2NL82 804 aaKnown RBP14.08□□□□□ -0.15
SHROOM3-208ENST00000486758 CCDC102BQ68D86 513 aa14.08□□□□□ -0.15
SHROOM3-208ENST00000486758 NYAP1Q6ZVC0 841 aa14.08□□□□□ -0.15
SHROOM3-208ENST00000486758 GPIHBP1Q8IV16 184 aa14.08□□□□□ -0.15
SHROOM3-208ENST00000486758 HELLSQ9NRZ9 838 aa14.08□□□□□ -0.15
SHROOM3-208ENST00000486758 ZNF142P52746 1687 aaPredicted RBP14.08□□□□□ -0.15
SHROOM3-208ENST00000486758 PHKA1P46020 1223 aa14.08□□□□□ -0.16
SHROOM3-208ENST00000486758 DPF2Q92785 391 aa14.08□□□□□ -0.16
SHROOM3-208ENST00000486758 DENND2AQ9ULE3 1009 aa14.08□□□□□ -0.16
SHROOM3-208ENST00000486758 ZNF532Q9HCE3 1301 aa14.08□□□□□ -0.16
SHROOM3-208ENST00000486758 CDC25BP30305 580 aa14.08□□□□□ -0.16
SHROOM3-208ENST00000486758 DNA2P51530 1060 aa14.08□□□□□ -0.16
SHROOM3-208ENST00000486758 DHX8Q14562 1220 aaKnown RBP14.08□□□□□ -0.16
SHROOM3-208ENST00000486758 PPP2R2CQ9Y2T4 447 aa14.08□□□□□ -0.16
SHROOM3-208ENST00000486758 UBR1Q8IWV7 1749 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 HLFQ16534 295 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 MFSD6Q6ZSS7 791 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 PARD6BQ9BYG5 372 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 DEF6Q9H4E7 631 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 STAMQ92783 540 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 DHX58Q96C10 678 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 CAPZA3Q96KX2 299 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 ACBD3Q9H3P7 528 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 IMPACTQ9P2X3 320 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 RCOR1Q9UKL0 485 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 CDKL5O76039 1030 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 CHMP4BP1P59074 171 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 SSRP1Q08945 709 aaKnown RBP14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 TCIRG1Q13488 830 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 NIP7Q9Y221 180 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 COL15A1P39059 1388 aa14.07□□□□□ -0.16
SHROOM3-208ENST00000486758 CYP2C19P33261 490 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 ATP6V1AP38606 617 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 MATR3P43243 847 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 NLRP12P59046 1061 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 ANO1Q5XXA6 986 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 MICALL1Q8N3F8 863 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 APPBP2Q92624 585 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 SECISBP2LQ93073 1101 aaKnown RBP14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 ZBTB1Q9Y2K1 713 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 NFE2L3Q9Y4A8 694 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 MYO1CO00159 1063 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 SLC5A1P13866 664 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 CYP7A1P22680 504 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 FILIP1LQ4L180 1135 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 ADALQ6DHV7 355 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 SARM1Q6SZW1 724 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 BRINP3Q76B58 766 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 PFKFB2O60825 505 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 SMIM5Q71RC9 77 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 NOC3LQ8WTT2 800 aaKnown RBP14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 FHOD1Q9Y613 1164 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 ZNF609O15014 1411 aa14.06□□□□□ -0.16
SHROOM3-208ENST00000486758 CCT6AP40227 531 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 ZMYM1Q5SVZ6 1142 aa14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 MYSM1Q5VVJ2 828 aa14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 WDR24Q96S15 920 aa14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 NUP88Q99567 741 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 NAA16Q6N069 864 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 SMARCC1Q92922 1105 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 ANKARQ7Z5J8 1434 aa14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 EFCAB8A8MWE9 144 aa14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 IPO7O95373 1038 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 NAP1L1P55209 391 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 LONRF2Q1L5Z9 754 aa14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 CENPHQ9H3R5 247 aa14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 ADAM21Q9UKJ8 722 aa14.05□□□□□ -0.16
SHROOM3-208ENST00000486758 PSDA5PKW4 1024 aaPredicted RBP14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 CCDC175P0C221 793 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 E2F4Q16254 413 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 GRAMD1CQ8IYS0 662 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 SEC31BQ9NQW1 1179 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 WWC3Q9ULE0 1092 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 PRKAB2O43741 272 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 ZFYP08048 801 aaPredicted RBP14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 WTAPQ15007 396 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 SDR42E1Q8WUS8 393 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 RUFY1Q96T51 708 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 CRACR2AQ9BSW2 395 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 GUCA1BQ9UMX6 200 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 SPATA31A6Q5VVP1 1343 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 KRT40Q6A162 431 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 ATG9AQ7Z3C6 839 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 SUGCTQ9HAC7 445 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 FEZ2Q9UHY8 353 aaPredicted RBP14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 FAN1Q9Y2M0 1017 aa14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 RRP15Q9Y3B9 282 aaKnown RBP14.04□□□□□ -0.16
SHROOM3-208ENST00000486758 PATL2C9JE40 543 aaKnown RBP14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 ARHGAP6O43182 974 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 BCAMP50895 628 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 TTC31Q49AM3 519 aaPredicted RBP14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 DSCC1Q9BVC3 393 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms