RNA–Protein interactions for RNA: ENST00000486750.1

SP140-211, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-211ENST00000486750 GNL3LQ9NVN8 582 aaKnown RBP16.41■□□□□ 0.22
SP140-211ENST00000486750 SRRDQ9UH36 339 aa16.41■□□□□ 0.22
SP140-211ENST00000486750 DENND2AQ9ULE3 1009 aa16.41■□□□□ 0.22
SP140-211ENST00000486750 KCNH4Q9UQ05 1017 aa16.41■□□□□ 0.22
SP140-211ENST00000486750 ZHX2Q9Y6X8 837 aa16.41■□□□□ 0.22
SP140-211ENST00000486750 MYPNQ86TC9 1320 aa16.41■□□□□ 0.22
SP140-211ENST00000486750 ATRNL1Q5VV63 1379 aa16.4■□□□□ 0.22
SP140-211ENST00000486750 BTDP43251 543 aa16.4■□□□□ 0.22
SP140-211ENST00000486750 PRKCZQ05513 592 aa16.4■□□□□ 0.22
SP140-211ENST00000486750 TAOK2Q9UL54 1235 aa16.4■□□□□ 0.22
SP140-211ENST00000486750 TRIM75PA6NK02 468 aa16.39■□□□□ 0.21
SP140-211ENST00000486750 PHF20L1A8MW92 1017 aa16.39■□□□□ 0.21
SP140-211ENST00000486750 CIAO1O76071 339 aa16.39■□□□□ 0.21
SP140-211ENST00000486750 NOL9Q5SY16 702 aaKnown RBP16.39■□□□□ 0.21
SP140-211ENST00000486750 TBC1D9Q6ZT07 1266 aa16.39■□□□□ 0.21
SP140-211ENST00000486750 A0A1B0GUL7 405 aa16.38■□□□□ 0.21
SP140-211ENST00000486750 CCL5P13501 91 aa16.38■□□□□ 0.21
SP140-211ENST00000486750 ELNP15502 786 aa16.38■□□□□ 0.21
SP140-211ENST00000486750 GRK4P32298 578 aa16.38■□□□□ 0.21
SP140-211ENST00000486750 IL15P40933 162 aaPredicted RBP16.38■□□□□ 0.21
SP140-211ENST00000486750 FXR1P51114 621 aaKnown RBP eCLIP16.38■□□□□ 0.21
SP140-211ENST00000486750 ZNF384Q8TF68 577 aa16.38■□□□□ 0.21
SP140-211ENST00000486750 XAGE2Q96GT9 111 aa16.38■□□□□ 0.21
SP140-211ENST00000486750 NEUROD6Q96NK8 337 aa16.38■□□□□ 0.21
SP140-211ENST00000486750 ZCCHC17Q9NP64 241 aaKnown RBP16.38■□□□□ 0.21
SP140-211ENST00000486750 PICK1Q9NRD5 415 aa16.38■□□□□ 0.21
SP140-211ENST00000486750 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
SP140-211ENST00000486750 CDK5RAP2Q96SN8 1893 aa16.37■□□□□ 0.21
SP140-211ENST00000486750 PTPRAP18433 802 aa16.37■□□□□ 0.21
SP140-211ENST00000486750 SCYL3Q8IZE3 742 aa16.37■□□□□ 0.21
SP140-211ENST00000486750 DPF3Q92784 378 aa16.37■□□□□ 0.21
SP140-211ENST00000486750 PARK7Q99497 189 aaKnown RBP16.37■□□□□ 0.21
SP140-211ENST00000486750 GAKO14976 1311 aa16.37■□□□□ 0.21
SP140-211ENST00000486750 SALL1Q9NSC2 1324 aa16.37■□□□□ 0.21
SP140-211ENST00000486750 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
SP140-211ENST00000486750 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
SP140-211ENST00000486750 BCRP11274 1271 aa16.36■□□□□ 0.21
SP140-211ENST00000486750 MECOMQ03112 1051 aa16.36■□□□□ 0.21
SP140-211ENST00000486750 CHRDL2Q6WN34 429 aa16.36■□□□□ 0.21
SP140-211ENST00000486750 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
SP140-211ENST00000486750 API5Q9BZZ5 524 aaKnown RBP16.36■□□□□ 0.21
SP140-211ENST00000486750 RNF208Q9H0X6 261 aa16.36■□□□□ 0.21
SP140-211ENST00000486750 UNC93B1Q9H1C4 597 aa16.36■□□□□ 0.21
SP140-211ENST00000486750 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
SP140-211ENST00000486750 MROH7-TTC4A0A0A0MT08 1334 aa16.36■□□□□ 0.21
SP140-211ENST00000486750 SIPA1L1O43166 1804 aa16.35■□□□□ 0.21
SP140-211ENST00000486750 A0A0G2JLL6 359 aaPredicted RBP16.35■□□□□ 0.21
SP140-211ENST00000486750 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
SP140-211ENST00000486750 TREML2Q5T2D2 321 aa16.35■□□□□ 0.21
SP140-211ENST00000486750 PRRT2Q7Z6L0 340 aaPredicted RBP16.35■□□□□ 0.21
SP140-211ENST00000486750 CLUAP1Q96AJ1 413 aa16.35■□□□□ 0.21
SP140-211ENST00000486750 IDI2Q9BXS1 227 aa16.35■□□□□ 0.21
SP140-211ENST00000486750 AFG3L2Q9Y4W6 797 aa16.35■□□□□ 0.21
SP140-211ENST00000486750 CXCL11O14625 94 aa16.34■□□□□ 0.21
SP140-211ENST00000486750 PEX10O60683 326 aa16.34■□□□□ 0.21
SP140-211ENST00000486750 ENTPD3O75355 529 aa16.34■□□□□ 0.21
SP140-211ENST00000486750 FCGRTP55899 365 aa16.34■□□□□ 0.21
SP140-211ENST00000486750 RHBDL3P58872 404 aa16.34■□□□□ 0.21
SP140-211ENST00000486750 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
SP140-211ENST00000486750 ERICH6Q7L0X2 663 aa16.34■□□□□ 0.21
SP140-211ENST00000486750 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
SP140-211ENST00000486750 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
SP140-211ENST00000486750 HMG20BQ9P0W2 317 aa16.34■□□□□ 0.21
SP140-211ENST00000486750 PNMA6EA0A0J9YXQ4 647 aa16.33■□□□□ 0.2
SP140-211ENST00000486750 SEMA3EO15041 775 aa16.33■□□□□ 0.2
SP140-211ENST00000486750 HOXD10P28358 340 aa16.33■□□□□ 0.2
SP140-211ENST00000486750 SHROOM1Q2M3G4 852 aaPredicted RBP16.33■□□□□ 0.2
SP140-211ENST00000486750 ANKRD13CQ8N6S4 541 aa16.33■□□□□ 0.2
SP140-211ENST00000486750 SMCR8Q8TEV9 937 aaPredicted RBP16.33■□□□□ 0.2
SP140-211ENST00000486750 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
SP140-211ENST00000486750 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
SP140-211ENST00000486750 LOC285556D6RIA3 1793 aa16.33■□□□□ 0.2
SP140-211ENST00000486750 ADCY3O60266 1144 aa16.32■□□□□ 0.2
SP140-211ENST00000486750 BCAR3O75815 825 aa16.32■□□□□ 0.2
SP140-211ENST00000486750 GNRH1P01148 92 aa16.32■□□□□ 0.2
SP140-211ENST00000486750 FLT3LGP49771 235 aa16.32■□□□□ 0.2
SP140-211ENST00000486750 PRMT2P55345 433 aa16.32■□□□□ 0.2
SP140-211ENST00000486750 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
SP140-211ENST00000486750 ZGPATQ8N5A5 531 aaKnown RBP16.32■□□□□ 0.2
SP140-211ENST00000486750 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.32■□□□□ 0.2
SP140-211ENST00000486750 TNPO2O14787 897 aaKnown RBP16.31■□□□□ 0.2
SP140-211ENST00000486750 INHAP05111 366 aa16.31■□□□□ 0.2
SP140-211ENST00000486750 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
SP140-211ENST00000486750 U2AF1L4Q8WU68 220 aaKnown RBP16.31■□□□□ 0.2
SP140-211ENST00000486750 RBM27Q9P2N5 1060 aaKnown RBP16.31■□□□□ 0.2
SP140-211ENST00000486750 FARP2O94887 1054 aaPredicted RBP16.3■□□□□ 0.2
SP140-211ENST00000486750 GJB1P08034 283 aa16.3■□□□□ 0.2
SP140-211ENST00000486750 MCAMP43121 646 aa16.3■□□□□ 0.2
SP140-211ENST00000486750 GJA8P48165 433 aa16.3■□□□□ 0.2
SP140-211ENST00000486750 HMGCS2P54868 508 aa16.3■□□□□ 0.2
SP140-211ENST00000486750 UBXN2AP68543 259 aa16.3■□□□□ 0.2
SP140-211ENST00000486750 SPP2Q13103 211 aa16.3■□□□□ 0.2
SP140-211ENST00000486750 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
SP140-211ENST00000486750 SPTY2D1Q68D10 685 aaPredicted RBP16.3■□□□□ 0.2
SP140-211ENST00000486750 SPATA5Q8NB90 893 aa16.3■□□□□ 0.2
SP140-211ENST00000486750 SH3RF3Q8TEJ3 882 aaPredicted RBP16.3■□□□□ 0.2
SP140-211ENST00000486750 C1orf115Q9H7X2 142 aa16.3■□□□□ 0.2
SP140-211ENST00000486750 PLXNB2O15031 1838 aa16.3■□□□□ 0.2
SP140-211ENST00000486750 MAST2Q6P0Q8 1798 aa16.29■□□□□ 0.2
SP140-211ENST00000486750 GPR75-ASB3A0A0A6YYF3 556 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms