RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 ARMC9Q7Z3E5 817 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 SIRT2Q8IXJ6 389 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 VGLL2Q8N8G2 317 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 MS4A4AQ96JQ5 239 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 PRMT6Q96LA8 375 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-208ENST00000486533 EYA2O00167 538 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 ERC2O15083 957 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 TRPA1O75762 1119 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 IFIT1P09914 478 aaKnown RBP10.81□□□□□ -0.68
COL12A1-208ENST00000486533 XRCC6P12956 609 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL12A1-208ENST00000486533 FBXO33Q7Z6M2 555 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 CSRNP1Q96S65 589 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 SIL1Q9H173 461 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 RNF186Q9NXI6 227 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 SAGE1Q9NXZ1 904 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-208ENST00000486533 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
COL12A1-208ENST00000486533 ANGEL1Q9UNK9 670 aaKnown RBP10.81□□□□□ -0.68
COL12A1-208ENST00000486533 AOX1Q06278 1338 aa10.8□□□□□ -0.68
COL12A1-208ENST00000486533 GNAI2P04899 355 aa10.8□□□□□ -0.68
COL12A1-208ENST00000486533 RFX5P48382 616 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-208ENST00000486533 BCAMP50895 628 aa10.8□□□□□ -0.68
COL12A1-208ENST00000486533 PTPN12Q05209 780 aaKnown RBP10.8□□□□□ -0.68
COL12A1-208ENST00000486533 KLHL40Q2TBA0 621 aa10.8□□□□□ -0.68
COL12A1-208ENST00000486533 ABHD8Q96I13 439 aa10.8□□□□□ -0.68
COL12A1-208ENST00000486533 SERPINA10Q9UK55 444 aa10.8□□□□□ -0.68
COL12A1-208ENST00000486533 FZD1Q9UP38 647 aa10.8□□□□□ -0.68
COL12A1-208ENST00000486533 HDAC5Q9UQL6 1122 aa10.8□□□□□ -0.68
COL12A1-208ENST00000486533 PPP2R3BQ9Y5P8 575 aa10.8□□□□□ -0.68
COL12A1-208ENST00000486533 LRRFIP2Q9Y608 721 aaKnown RBP10.8□□□□□ -0.68
COL12A1-208ENST00000486533 MYH13Q9UKX3 1938 aa10.79□□□□□ -0.68
COL12A1-208ENST00000486533 PPP1R12BO60237 982 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-208ENST00000486533 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-208ENST00000486533 SLC5A1P13866 664 aa10.79□□□□□ -0.68
COL12A1-208ENST00000486533 TBC1D22AQ8WUA7 517 aa10.79□□□□□ -0.68
COL12A1-208ENST00000486533 KIF2CQ99661 725 aa10.79□□□□□ -0.68
COL12A1-208ENST00000486533 MEIS3Q99687 375 aa10.79□□□□□ -0.68
COL12A1-208ENST00000486533 GZF1Q9H116 711 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-208ENST00000486533 GSPT1P15170 499 aaKnown RBP10.78□□□□□ -0.68
COL12A1-208ENST00000486533 FGFR2P21802 821 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 CLCN1P35523 988 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 CRKP46108 304 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 ANAPC15P60006 121 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 CCDC173Q0VFZ6 552 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 TNFAIP1Q13829 316 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 RASA3Q14644 834 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 SUPT20HL1Q3ZLR7 823 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 ATG9AQ7Z3C6 839 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 LPIN2Q92539 896 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 USP26Q9BXU7 913 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 TDRD3Q9H7E2 651 aaKnown RBP10.78□□□□□ -0.68
COL12A1-208ENST00000486533 ZNF70Q9UC06 446 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-208ENST00000486533 SSC5DA1L4H1 1573 aa10.78□□□□□ -0.68
COL12A1-208ENST00000486533 CIAO1O76071 339 aa10.77□□□□□ -0.68
COL12A1-208ENST00000486533 DGKZQ13574 1117 aa10.77□□□□□ -0.68
COL12A1-208ENST00000486533 GRIK5Q16478 980 aa10.77□□□□□ -0.68
COL12A1-208ENST00000486533 NBPF12Q5TAG4 269 aaPredicted RBP10.77□□□□□ -0.68
COL12A1-208ENST00000486533 MARVELD3Q96A59 401 aa10.77□□□□□ -0.68
COL12A1-208ENST00000486533 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.68
COL12A1-208ENST00000486533 CCDC85CA6NKD9 419 aa10.77□□□□□ -0.69
COL12A1-208ENST00000486533 TCP10L2B9ZVM9 353 aa10.77□□□□□ -0.69
COL12A1-208ENST00000486533 IREB2P48200 963 aaKnown RBP10.77□□□□□ -0.69
COL12A1-208ENST00000486533 ATP2B3Q16720 1220 aa10.77□□□□□ -0.69
COL12A1-208ENST00000486533 LDLRAD1Q5T700 205 aa10.77□□□□□ -0.69
COL12A1-208ENST00000486533 TEKT1Q969V4 418 aa10.77□□□□□ -0.69
COL12A1-208ENST00000486533 SLC10A4Q96EP9 437 aa10.77□□□□□ -0.69
COL12A1-208ENST00000486533 MCOLN1Q9GZU1 580 aa10.77□□□□□ -0.69
COL12A1-208ENST00000486533 PA2G4Q9UQ80 394 aaKnown RBP10.77□□□□□ -0.69
COL12A1-208ENST00000486533 DDX49Q9Y6V7 483 aaKnown RBP10.77□□□□□ -0.69
COL12A1-208ENST00000486533 AK9Q5TCS8 1911 aa10.77□□□□□ -0.69
COL12A1-208ENST00000486533 BAG4O95429 457 aaKnown RBP10.76□□□□□ -0.69
COL12A1-208ENST00000486533 MBD3O95983 291 aa10.76□□□□□ -0.69
COL12A1-208ENST00000486533 HOXB3P14651 431 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-208ENST00000486533 SDSP20132 328 aa10.76□□□□□ -0.69
COL12A1-208ENST00000486533 IL15P40933 162 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-208ENST00000486533 TNNI2P48788 182 aa10.76□□□□□ -0.69
COL12A1-208ENST00000486533 HDLBPQ00341 1268 aaKnown RBP10.76□□□□□ -0.69
COL12A1-208ENST00000486533 SREBF2Q12772 1141 aa10.76□□□□□ -0.69
COL12A1-208ENST00000486533 CLMNQ96JQ2 1002 aa10.76□□□□□ -0.69
COL12A1-208ENST00000486533 LRRCC1Q9C099 1032 aa10.76□□□□□ -0.69
COL12A1-208ENST00000486533 MAST3O60307 1309 aa10.76□□□□□ -0.69
COL12A1-208ENST00000486533 SRGAP3O43295 1099 aa10.75□□□□□ -0.69
COL12A1-208ENST00000486533 RAB11FIP3O75154 756 aa10.75□□□□□ -0.69
COL12A1-208ENST00000486533 TM4SF4P48230 202 aa10.75□□□□□ -0.69
COL12A1-208ENST00000486533 MAP3K11Q16584 847 aa10.75□□□□□ -0.69
COL12A1-208ENST00000486533 SPRYD7Q5W111 196 aa10.75□□□□□ -0.69
COL12A1-208ENST00000486533 WDR66Q8TBY9 1149 aa10.75□□□□□ -0.69
COL12A1-208ENST00000486533 SYAP1Q96A49 352 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-208ENST00000486533 TMEM39BQ9GZU3 492 aa10.75□□□□□ -0.69
COL12A1-208ENST00000486533 GNL3LQ9NVN8 582 aaKnown RBP10.75□□□□□ -0.69
COL12A1-208ENST00000486533 TMOD2Q9NZR1 351 aa10.75□□□□□ -0.69
COL12A1-208ENST00000486533 SUGT1Q9Y2Z0 365 aa10.75□□□□□ -0.69
COL12A1-208ENST00000486533 TBC1D8O95759 1140 aa10.74□□□□□ -0.69
COL12A1-208ENST00000486533 CACNB3P54284 484 aa10.74□□□□□ -0.69
COL12A1-208ENST00000486533 PDE1AP54750 535 aa10.74□□□□□ -0.69
COL12A1-208ENST00000486533 HSP90AB4PQ58FF6 505 aa10.74□□□□□ -0.69
COL12A1-208ENST00000486533 ANKRD13AQ8IZ07 590 aa10.74□□□□□ -0.69
COL12A1-208ENST00000486533 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
COL12A1-208ENST00000486533 ZDHHC15Q96MV8 337 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms