RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ATP8B2P98198 1209 aa27.62■■■□□ 2.01
SREBF1-214ENST00000486311 MOGSQ13724 837 aa27.62■■■□□ 2.01
SREBF1-214ENST00000486311 TBC1D9Q6ZT07 1266 aa27.62■■■□□ 2.01
SREBF1-214ENST00000486311 ZSCAN29Q8IWY8 852 aaPredicted RBP27.62■■■□□ 2.01
SREBF1-214ENST00000486311 SSH3Q8TE77 659 aa27.62■■■□□ 2.01
SREBF1-214ENST00000486311 NSUN4Q96CB9 384 aaKnown RBP27.62■■■□□ 2.01
SREBF1-214ENST00000486311 GPR108Q9NPR9 543 aa27.62■■■□□ 2.01
SREBF1-214ENST00000486311 DDTLA6NHG4 134 aaPredicted RBP27.61■■■□□ 2.01
SREBF1-214ENST00000486311 NPM3O75607 178 aaKnown RBP27.61■■■□□ 2.01
SREBF1-214ENST00000486311 GSTO1P78417 241 aa27.61■■■□□ 2.01
SREBF1-214ENST00000486311 FTSJ3Q8IY81 847 aaKnown RBP27.61■■■□□ 2.01
SREBF1-214ENST00000486311 SCYL3Q8IZE3 742 aa27.61■■■□□ 2.01
SREBF1-214ENST00000486311 CXCL11O14625 94 aa27.6■■■□□ 2.01
SREBF1-214ENST00000486311 MAP4K4O95819 1239 aaPredicted RBP27.6■■■□□ 2.01
SREBF1-214ENST00000486311 LDHCP07864 332 aa27.6■■■□□ 2.01
SREBF1-214ENST00000486311 MCAMP43121 646 aa27.6■■■□□ 2.01
SREBF1-214ENST00000486311 LACTBP83111 547 aaPredicted RBP27.6■■■□□ 2.01
SREBF1-214ENST00000486311 PICALMQ13492 652 aa27.6■■■□□ 2.01
SREBF1-214ENST00000486311 PDHXO00330 501 aa27.59■■■□□ 2.01
SREBF1-214ENST00000486311 KIF22Q14807 665 aa27.59■■■□□ 2.01
SREBF1-214ENST00000486311 PRPF38BQ5VTL8 546 aaKnown RBP27.59■■■□□ 2.01
SREBF1-214ENST00000486311 C17orf99Q6UX52 265 aa27.59■■■□□ 2.01
SREBF1-214ENST00000486311 CENPFP49454 3210 aa27.58■■■□□ 2.01
SREBF1-214ENST00000486311 RLBP1P12271 317 aa27.58■■■□□ 2.01
SREBF1-214ENST00000486311 TNNI3KQ59H18 835 aa27.58■■■□□ 2.01
SREBF1-214ENST00000486311 ARHGAP39Q9C0H5 1083 aa27.58■■■□□ 2.01
SREBF1-214ENST00000486311 C1orf115Q9H7X2 142 aa27.58■■■□□ 2.01
SREBF1-214ENST00000486311 PICK1Q9NRD5 415 aa27.58■■■□□ 2.01
SREBF1-214ENST00000486311 RAI14Q9P0K7 980 aa27.58■■■□□ 2.01
SREBF1-214ENST00000486311 PTCH2Q9Y6C5 1203 aa27.58■■■□□ 2.01
SREBF1-214ENST00000486311 FPGT-TNNI3KV9GXZ4 949 aa27.58■■■□□ 2.01
SREBF1-214ENST00000486311 MYH2Q9UKX2 1941 aa27.57■■■□□ 2
SREBF1-214ENST00000486311 POTEFA5A3E0 1075 aa27.57■■■□□ 2
SREBF1-214ENST00000486311 ZBTB7BO15156 539 aaPredicted RBP27.57■■■□□ 2
SREBF1-214ENST00000486311 PTPRAP18433 802 aa27.57■■■□□ 2
SREBF1-214ENST00000486311 OS9Q13438 667 aaPredicted RBP27.57■■■□□ 2
SREBF1-214ENST00000486311 ITPRIPQ8IWB1 547 aa27.57■■■□□ 2
SREBF1-214ENST00000486311 ZHX2Q9Y6X8 837 aa27.57■■■□□ 2
SREBF1-214ENST00000486311 SURF6O75683 361 aaKnown RBP27.56■■■□□ 2
SREBF1-214ENST00000486311 GNRH1P01148 92 aa27.56■■■□□ 2
SREBF1-214ENST00000486311 SLURP2P0DP57 97 aa27.56■■■□□ 2
SREBF1-214ENST00000486311 GPAT2Q6NUI2 795 aa27.56■■■□□ 2
SREBF1-214ENST00000486311 ZNF333Q96JL9 665 aa27.56■■■□□ 2
SREBF1-214ENST00000486311 DBNDD2Q9BQY9 259 aa27.56■■■□□ 2
SREBF1-214ENST00000486311 CPA4Q9UI42 421 aa27.56■■■□□ 2
SREBF1-214ENST00000486311 NOP58Q9Y2X3 529 aaKnown RBP27.56■■■□□ 2
SREBF1-214ENST00000486311 ADGRA2Q96PE1 1338 aa27.56■■■□□ 2
SREBF1-214ENST00000486311 TBC1D12O60347 775 aa27.55■■■□□ 2
SREBF1-214ENST00000486311 CTNND1O60716 968 aaKnown RBP27.55■■■□□ 2
SREBF1-214ENST00000486311 LRP2BPQ9P2M1 347 aa27.55■■■□□ 2
SREBF1-214ENST00000486311 ZBED9Q6R2W3 1325 aa27.55■■■□□ 2
SREBF1-214ENST00000486311 A0A0G2JLL6 359 aaPredicted RBP27.54■■■□□ 2
SREBF1-214ENST00000486311 SLC9C1Q4G0N8 1177 aa27.54■■■□□ 2
SREBF1-214ENST00000486311 CCDC158Q5M9N0 1113 aa27.54■■■□□ 2
SREBF1-214ENST00000486311 TTC39AQ5SRH9 613 aa27.54■■■□□ 2
SREBF1-214ENST00000486311 PRRT2Q7Z6L0 340 aaPredicted RBP27.54■■■□□ 2
SREBF1-214ENST00000486311 NBPF11Q86T75 865 aa27.54■■■□□ 2
SREBF1-214ENST00000486311 PARK7Q99497 189 aaKnown RBP27.54■■■□□ 2
SREBF1-214ENST00000486311 AFG3L2Q9Y4W6 797 aa27.54■■■□□ 2
SREBF1-214ENST00000486311 PRMT2P55345 433 aa27.53■■■□□ 2
SREBF1-214ENST00000486311 FASTKD5Q7L8L6 764 aaKnown RBP27.53■■■□□ 2
SREBF1-214ENST00000486311 ZNF512BQ96KM6 892 aaPredicted RBP27.53■■■□□ 2
SREBF1-214ENST00000486311 SNRKQ9NRH2 765 aa27.53■■■□□ 2
SREBF1-214ENST00000486311 COL2A1P02458 1487 aaPredicted RBP27.52■■■□□ 2
SREBF1-214ENST00000486311 AK9Q5TCS8 1911 aa27.52■■■□□ 2
SREBF1-214ENST00000486311 OSBPL5Q9H0X9 879 aaPredicted RBP27.52■■■□□ 2
SREBF1-214ENST00000486311 DOCK2Q92608 1830 aa27.52■■■□□ 2
SREBF1-214ENST00000486311 RBBP6Q7Z6E9 1792 aaKnown RBP27.51■■□□□ 1.99
SREBF1-214ENST00000486311 TEX11Q8IYF3 940 aa27.51■■□□□ 1.99
SREBF1-214ENST00000486311 BRCA2P51587 3418 aa27.5■■□□□ 1.99
SREBF1-214ENST00000486311 CTGFP29279 349 aa27.5■■□□□ 1.99
SREBF1-214ENST00000486311 TMEM106CQ9BVX2 250 aa27.5■■□□□ 1.99
SREBF1-214ENST00000486311 IGSF3O75054 1194 aa27.49■■□□□ 1.99
SREBF1-214ENST00000486311 CYP2E1P05181 493 aaPredicted RBP27.49■■□□□ 1.99
SREBF1-214ENST00000486311 CYP2C8P10632 490 aa27.49■■□□□ 1.99
SREBF1-214ENST00000486311 BCRP11274 1271 aa27.49■■□□□ 1.99
SREBF1-214ENST00000486311 EN2P19622 333 aaPredicted RBP27.49■■□□□ 1.99
SREBF1-214ENST00000486311 PSMC4P43686 418 aa27.49■■□□□ 1.99
SREBF1-214ENST00000486311 NAA16Q6N069 864 aaPredicted RBP27.49■■□□□ 1.99
SREBF1-214ENST00000486311 SH3RF3Q8TEJ3 882 aaPredicted RBP27.49■■□□□ 1.99
SREBF1-214ENST00000486311 TRIM47Q96LD4 638 aa27.49■■□□□ 1.99
SREBF1-214ENST00000486311 NOL10Q9BSC4 688 aaKnown RBP27.49■■□□□ 1.99
SREBF1-214ENST00000486311 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.49■■□□□ 1.99
SREBF1-214ENST00000486311 DBNLQ9UJU6 430 aaKnown RBP27.49■■□□□ 1.99
SREBF1-214ENST00000486311 SLC45A1Q9Y2W3 748 aa27.49■■□□□ 1.99
SREBF1-214ENST00000486311 MKI67P46013 3256 aaKnown RBP27.48■■□□□ 1.99
SREBF1-214ENST00000486311 BAG3O95817 575 aa27.48■■□□□ 1.99
SREBF1-214ENST00000486311 CEP85Q6P2H3 762 aa27.48■■□□□ 1.99
SREBF1-214ENST00000486311 SRRDQ9UH36 339 aa27.48■■□□□ 1.99
SREBF1-214ENST00000486311 FAM196BA6NMK8 535 aa27.47■■□□□ 1.99
SREBF1-214ENST00000486311 PPP4CP60510 307 aa27.47■■□□□ 1.99
SREBF1-214ENST00000486311 GADL1Q6ZQY3 521 aa27.47■■□□□ 1.99
SREBF1-214ENST00000486311 SH3TC2Q8TF17 1288 aa27.47■■□□□ 1.99
SREBF1-214ENST00000486311 AATFQ9NY61 560 aaKnown RBP eCLIP27.47■■□□□ 1.99
SREBF1-214ENST00000486311 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.47■■□□□ 1.99
SREBF1-214ENST00000486311 TRIM75PA6NK02 468 aa27.46■■□□□ 1.99
SREBF1-214ENST00000486311 ECM2O94769 699 aaPredicted RBP27.46■■□□□ 1.99
SREBF1-214ENST00000486311 PLCG2P16885 1265 aa27.46■■□□□ 1.99
SREBF1-214ENST00000486311 OSBPP22059 807 aa27.46■■□□□ 1.99
SREBF1-214ENST00000486311 HOXD10P28358 340 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms