RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ZFPM1Q8IX07 1006 aa21.55■■□□□ 1.04
SREBF1-213ENST00000485080 TEX11Q8IYF3 940 aa21.55■■□□□ 1.04
SREBF1-213ENST00000485080 SH3RF3Q8TEJ3 882 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-213ENST00000485080 ADD2P35612 726 aa21.54■■□□□ 1.04
SREBF1-213ENST00000485080 UBE3CQ15386 1083 aa21.54■■□□□ 1.04
SREBF1-213ENST00000485080 KBTBD3Q8NAB2 608 aa21.54■■□□□ 1.04
SREBF1-213ENST00000485080 RIOK1Q9BRS2 568 aaKnown RBP21.54■■□□□ 1.04
SREBF1-213ENST00000485080 PDE1AP54750 535 aa21.53■■□□□ 1.04
SREBF1-213ENST00000485080 TSHZ3Q63HK5 1081 aa21.53■■□□□ 1.04
SREBF1-213ENST00000485080 ZSCAN25Q6NSZ9 544 aa21.53■■□□□ 1.04
SREBF1-213ENST00000485080 PAXIP1Q6ZW49 1069 aaPredicted RBP21.53■■□□□ 1.04
SREBF1-213ENST00000485080 SH3BP5LQ7L8J4 393 aa21.53■■□□□ 1.04
SREBF1-213ENST00000485080 RASAL3Q86YV0 1011 aa21.53■■□□□ 1.04
SREBF1-213ENST00000485080 ANKRD13AQ8IZ07 590 aa21.53■■□□□ 1.04
SREBF1-213ENST00000485080 LNPKQ9C0E8 428 aa21.53■■□□□ 1.04
SREBF1-213ENST00000485080 ZNF532Q9HCE3 1301 aa21.53■■□□□ 1.04
SREBF1-213ENST00000485080 PRKG1Q13976 671 aa21.52■■□□□ 1.04
SREBF1-213ENST00000485080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.52■■□□□ 1.045e-8■■□□□ 12.5
SREBF1-213ENST00000485080 OSBPL5Q9H0X9 879 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-213ENST00000485080 ZNF112Q9UJU3 913 aa21.52■■□□□ 1.04
SREBF1-213ENST00000485080 TBC1D12O60347 775 aa21.51■■□□□ 1.03
SREBF1-213ENST00000485080 DYNLL1P63167 89 aaKnown RBP21.51■■□□□ 1.03
SREBF1-213ENST00000485080 MAP3K9P80192 1104 aa21.51■■□□□ 1.03
SREBF1-213ENST00000485080 B4GALNT3Q6L9W6 998 aa21.51■■□□□ 1.03
SREBF1-213ENST00000485080 TICAM2Q86XR7 235 aa21.51■■□□□ 1.03
SREBF1-213ENST00000485080 REM2Q8IYK8 340 aaPredicted RBP21.51■■□□□ 1.03
SREBF1-213ENST00000485080 CSRNP1Q96S65 589 aa21.51■■□□□ 1.03
SREBF1-213ENST00000485080 ZNF341Q9BYN7 854 aa21.51■■□□□ 1.03
SREBF1-213ENST00000485080 DHX36Q9H2U1 1008 aaKnown RBP21.51■■□□□ 1.03
SREBF1-213ENST00000485080 OSBPL3Q9H4L5 887 aa21.51■■□□□ 1.03
SREBF1-213ENST00000485080 FZD1Q9UP38 647 aa21.51■■□□□ 1.03
SREBF1-213ENST00000485080 MYH7P12883 1935 aa21.51■■□□□ 1.03
SREBF1-213ENST00000485080 FOCADQ5VW36 1801 aa21.5■■□□□ 1.03
SREBF1-213ENST00000485080 DDTLA6NHG4 134 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-213ENST00000485080 MAP2K1Q02750 393 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-213ENST00000485080 PICALMQ13492 652 aa21.5■■□□□ 1.03
SREBF1-213ENST00000485080 LRRFIP1Q32MZ4 808 aaKnown RBP21.5■■□□□ 1.03
SREBF1-213ENST00000485080 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-213ENST00000485080 MIGA1Q8NAN2 632 aa21.5■■□□□ 1.03
SREBF1-213ENST00000485080 AK9Q5TCS8 1911 aa21.5■■□□□ 1.03
SREBF1-213ENST00000485080 FLT1P17948 1338 aa21.5■■□□□ 1.03
SREBF1-213ENST00000485080 CDK5RAP2Q96SN8 1893 aa21.49■■□□□ 1.03
SREBF1-213ENST00000485080 MAGEB6P1A0A0J9YX57 407 aa21.49■■□□□ 1.03
SREBF1-213ENST00000485080 AOC2O75106 756 aa21.49■■□□□ 1.03
SREBF1-213ENST00000485080 ZFYP08048 801 aaPredicted RBP21.49■■□□□ 1.03
SREBF1-213ENST00000485080 TGFBRAP1Q8WUH2 860 aa21.49■■□□□ 1.03
SREBF1-213ENST00000485080 SLC10A4Q96EP9 437 aa21.49■■□□□ 1.03
SREBF1-213ENST00000485080 WBP1LQ9NX94 342 aa21.49■■□□□ 1.03
SREBF1-213ENST00000485080 ZBTB48P10074 688 aaPredicted RBP21.48■■□□□ 1.03
SREBF1-213ENST00000485080 METTL16Q86W50 562 aaKnown RBP21.48■■□□□ 1.03
SREBF1-213ENST00000485080 ZSCAN29Q8IWY8 852 aaPredicted RBP21.48■■□□□ 1.03
SREBF1-213ENST00000485080 CLMNQ96JQ2 1002 aa21.48■■□□□ 1.03
SREBF1-213ENST00000485080 OTOFQ9HC10 1997 aa21.47■■□□□ 1.03
SREBF1-213ENST00000485080 PHF20L1A8MW92 1017 aa21.47■■□□□ 1.03
SREBF1-213ENST00000485080 CENPBP07199 599 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-213ENST00000485080 SPRYD7Q5W111 196 aa21.47■■□□□ 1.03
SREBF1-213ENST00000485080 MIGA2Q7L4E1 593 aa21.47■■□□□ 1.03
SREBF1-213ENST00000485080 PLEKHM2Q8IWE5 1019 aa21.47■■□□□ 1.03
SREBF1-213ENST00000485080 WRNIP1Q96S55 665 aa21.47■■□□□ 1.03
SREBF1-213ENST00000485080 PI4KBQ9UBF8 816 aa21.47■■□□□ 1.03
SREBF1-213ENST00000485080 CSADQ9Y600 493 aa21.47■■□□□ 1.03
SREBF1-213ENST00000485080 RNF113AO15541 343 aaKnown RBP21.46■■□□□ 1.03
SREBF1-213ENST00000485080 KIF23Q02241 960 aaPredicted RBP21.46■■□□□ 1.03
SREBF1-213ENST00000485080 GRM1Q13255 1194 aa21.46■■□□□ 1.03
SREBF1-213ENST00000485080 VGLL4Q14135 290 aa21.46■■□□□ 1.03
SREBF1-213ENST00000485080 NOL9Q5SY16 702 aaKnown RBP21.46■■□□□ 1.03
SREBF1-213ENST00000485080 MAPKAPK5Q8IW41 473 aa21.46■■□□□ 1.03
SREBF1-213ENST00000485080 ZIC5Q96T25 663 aa21.46■■□□□ 1.03
SREBF1-213ENST00000485080 CRNKL1Q9BZJ0 848 aaKnown RBP21.46■■□□□ 1.03
SREBF1-213ENST00000485080 HERC5Q9UII4 1024 aaKnown RBP21.46■■□□□ 1.03
SREBF1-213ENST00000485080 FOXP4Q8IVH2 680 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-213ENST00000485080 APPBP2Q92624 585 aa21.45■■□□□ 1.02
SREBF1-213ENST00000485080 EVI5LQ96CN4 794 aa21.45■■□□□ 1.02
SREBF1-213ENST00000485080 WNK4Q96J92 1243 aa21.45■■□□□ 1.02
SREBF1-213ENST00000485080 USP5P45974 858 aa21.44■■□□□ 1.02
SREBF1-213ENST00000485080 LCORLQ8N3X6 602 aa21.44■■□□□ 1.02
SREBF1-213ENST00000485080 SNCAIPQ9Y6H5 919 aa21.44■■□□□ 1.02
SREBF1-213ENST00000485080 LAMB1P07942 1786 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 SPDYE5A6NIY4 337 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 CA12O43570 354 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 MBD4O95243 580 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 CHGBP05060 677 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 TM4SF4P48230 202 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 SLFNL1Q499Z3 407 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 ERO1BQ86YB8 467 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 PUS7LQ9H0K6 701 aaKnown RBP21.43■■□□□ 1.02
SREBF1-213ENST00000485080 ATP8A2Q9NTI2 1148 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 TAOK2Q9UL54 1235 aa21.43■■□□□ 1.02
SREBF1-213ENST00000485080 HSPA1AP0DMV8 641 aaKnown RBP21.42■■□□□ 1.02
SREBF1-213ENST00000485080 HSPA1BP0DMV9 641 aaKnown RBP21.42■■□□□ 1.02
SREBF1-213ENST00000485080 INPP5BP32019 993 aa21.42■■□□□ 1.02
SREBF1-213ENST00000485080 INHBEP58166 350 aa21.42■■□□□ 1.02
SREBF1-213ENST00000485080 ZKSCAN4Q969J2 545 aaPredicted RBP21.42■■□□□ 1.02
SREBF1-213ENST00000485080 AIDAQ96BJ3 306 aa21.42■■□□□ 1.02
SREBF1-213ENST00000485080 EHD4Q9H223 541 aa21.42■■□□□ 1.02
SREBF1-213ENST00000485080 ARMT1Q9H993 441 aa21.42■■□□□ 1.02
SREBF1-213ENST00000485080 ELP3Q9H9T3 547 aa21.42■■□□□ 1.02
SREBF1-213ENST00000485080 PALD1Q9ULE6 856 aa21.42■■□□□ 1.02
SREBF1-213ENST00000485080 MANSC4A6NHS7 340 aaPredicted RBP21.41■■□□□ 1.02
SREBF1-213ENST00000485080 CTNND1O60716 968 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms