RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 RASSF4Q9H2L5 321 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 POLLQ9UGP5 575 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
APTX-226ENST00000483148 AKAP11Q9UKA4 1901 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 UTYO14607 1347 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 GRM8O00222 908 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 HOXD11P31277 338 aaPredicted RBP11.79□□□□□ -0.52
APTX-226ENST00000483148 TNNT3P45378 269 aaPredicted RBP11.79□□□□□ -0.52
APTX-226ENST00000483148 CASP7P55210 303 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 TYRO3Q06418 890 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 RAD51AP2Q09MP3 1159 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 WASHC4Q2M389 1173 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 USP44Q9H0E7 712 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 CWC15Q9P013 229 aaKnown RBP11.79□□□□□ -0.52
APTX-226ENST00000483148 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
APTX-226ENST00000483148 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 V9GYY5 206 aaPredicted RBP11.79□□□□□ -0.52
APTX-226ENST00000483148 SH3TC1Q8TE82 1336 aa11.79□□□□□ -0.52
APTX-226ENST00000483148 GPSM2P81274 684 aa11.78□□□□□ -0.52
APTX-226ENST00000483148 GPS2Q13227 327 aa11.78□□□□□ -0.52
APTX-226ENST00000483148 NAA30Q147X3 362 aaPredicted RBP11.78□□□□□ -0.52
APTX-226ENST00000483148 RASAL3Q86YV0 1011 aa11.78□□□□□ -0.52
APTX-226ENST00000483148 CELF1Q92879 486 aaKnown RBP11.78□□□□□ -0.52
APTX-226ENST00000483148 CDCA5Q96FF9 252 aa11.78□□□□□ -0.52
APTX-226ENST00000483148 FAM89AQ96GI7 184 aa11.78□□□□□ -0.52
APTX-226ENST00000483148 TRIM5Q9C035 493 aa11.78□□□□□ -0.52
APTX-226ENST00000483148 NUP62CLQ9H1M0 184 aa11.78□□□□□ -0.52
APTX-226ENST00000483148 SMC3Q9UQE7 1217 aa11.78□□□□□ -0.52
APTX-226ENST00000483148 RAD50Q92878 1312 aa11.78□□□□□ -0.52
APTX-226ENST00000483148 DDX60Q8IY21 1712 aaKnown RBP11.78□□□□□ -0.52
APTX-226ENST00000483148 FIBPO43427 364 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 TBC1D8O95759 1140 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 SYT1P21579 422 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 CHMLP26374 656 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 HSPA4P34932 840 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 DHX8Q14562 1220 aaKnown RBP11.77□□□□□ -0.52
APTX-226ENST00000483148 KIF4BQ2VIQ3 1234 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 SARM1Q6SZW1 724 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 MOB2Q70IA6 237 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 UBE3BQ7Z3V4 1068 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 ARGLU1Q9NWB6 273 aaPredicted RBP11.77□□□□□ -0.52
APTX-226ENST00000483148 GGA3Q9NZ52 723 aa11.77□□□□□ -0.52
APTX-226ENST00000483148 AOX1Q06278 1338 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 COL4A1P02462 1669 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 C6orf229H3BNL8 230 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 ECE2O60344 883 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 NBPF7P0C2Y1 421 aaPredicted RBP11.77□□□□□ -0.53
APTX-226ENST00000483148 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
APTX-226ENST00000483148 LRMPQ12912 555 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 ELF2Q15723 593 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 FOXD4L6Q3SYB3 417 aaPredicted RBP11.77□□□□□ -0.53
APTX-226ENST00000483148 FOXD4L3Q6VB84 417 aaPredicted RBP11.77□□□□□ -0.53
APTX-226ENST00000483148 RBM43Q6ZSC3 357 aaKnown RBP11.77□□□□□ -0.53
APTX-226ENST00000483148 FILIP1Q7Z7B0 1213 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 CBX8Q9HC52 389 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.53
APTX-226ENST00000483148 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.53
APTX-226ENST00000483148 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 PALD1Q9ULE6 856 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.53
APTX-226ENST00000483148 IRS4O14654 1257 aaPredicted RBP11.76□□□□□ -0.53
APTX-226ENST00000483148 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
APTX-226ENST00000483148 LRRC8AQ8IWT6 810 aa11.76□□□□□ -0.53
APTX-226ENST00000483148 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
APTX-226ENST00000483148 CACTINQ8WUQ7 758 aaKnown RBP11.76□□□□□ -0.53
APTX-226ENST00000483148 ZNF296Q8WUU4 475 aaPredicted RBP11.76□□□□□ -0.53
APTX-226ENST00000483148 ZNF592Q92610 1267 aa11.76□□□□□ -0.53
APTX-226ENST00000483148 MRFAP1L1Q96HT8 127 aa11.76□□□□□ -0.53
APTX-226ENST00000483148 MEIS3Q99687 375 aa11.76□□□□□ -0.53
APTX-226ENST00000483148 PLA2G12BQ9BX93 195 aa11.76□□□□□ -0.53
APTX-226ENST00000483148 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
APTX-226ENST00000483148 ANO2Q9NQ90 1003 aa11.76□□□□□ -0.53
APTX-226ENST00000483148 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
APTX-226ENST00000483148 SALL3Q9BXA9 1300 aa11.76□□□□□ -0.53
APTX-226ENST00000483148 TPM1P09493 284 aa11.75□□□□□ -0.53
APTX-226ENST00000483148 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
APTX-226ENST00000483148 ZSCAN31Q96LW9 406 aaPredicted RBP11.75□□□□□ -0.53
APTX-226ENST00000483148 L2HGDHQ9H9P8 463 aa11.75□□□□□ -0.53
APTX-226ENST00000483148 ZNF446Q9NWS9 450 aa11.75□□□□□ -0.53
APTX-226ENST00000483148 FHOD1Q9Y613 1164 aa11.75□□□□□ -0.53
APTX-226ENST00000483148 MYH3P11055 1940 aa11.75□□□□□ -0.53
APTX-226ENST00000483148 UBE2Q2LH0YL09 131 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
APTX-226ENST00000483148 MMP14P50281 582 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 SCARF1Q14162 830 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
APTX-226ENST00000483148 ANGEL2Q5VTE6 544 aaKnown RBP11.74□□□□□ -0.53
APTX-226ENST00000483148 NOL8Q76FK4 1167 aaKnown RBP11.74□□□□□ -0.53
APTX-226ENST00000483148 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 KAZALD1Q96I82 304 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 TTC14Q96N46 770 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 R3HDMLQ9H3Y0 253 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 HDAC9Q9UKV0 1011 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 TCHHQ07283 1943 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 SCN9AQ15858 1988 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 PDE8AO60658 829 aa11.74□□□□□ -0.53
APTX-226ENST00000483148 GNAI3P08754 354 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms