RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 TRPA1O75762 1119 aa20.7■□□□□ 0.9
NELFCD-208ENST00000482747 CHGBP05060 677 aa20.7■□□□□ 0.9
NELFCD-208ENST00000482747 INPP5BP32019 993 aa20.7■□□□□ 0.9
NELFCD-208ENST00000482747 MAP3K9P80192 1104 aa20.7■□□□□ 0.9
NELFCD-208ENST00000482747 ENTPD3O75355 529 aa20.69■□□□□ 0.9
NELFCD-208ENST00000482747 OTUD7AQ8TE49 926 aaPredicted RBP20.69■□□□□ 0.9
NELFCD-208ENST00000482747 WNK4Q96J92 1243 aa20.69■□□□□ 0.9
NELFCD-208ENST00000482747 NOL10Q9BSC4 688 aaKnown RBP20.69■□□□□ 0.9
NELFCD-208ENST00000482747 RPAP1Q9BWH6 1393 aaPredicted RBP20.68■□□□□ 0.9
NELFCD-208ENST00000482747 ATP5JP18859 108 aa20.68■□□□□ 0.9
NELFCD-208ENST00000482747 RNF186Q9NXI6 227 aa20.68■□□□□ 0.9
NELFCD-208ENST00000482747 MAST2Q6P0Q8 1798 aa20.68■□□□□ 0.9
NELFCD-208ENST00000482747 FAM196BA6NMK8 535 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 MAP3K12Q12852 859 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 TGFBRAP1Q8WUH2 860 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 OPTNQ96CV9 577 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 BAG3O95817 575 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 SLC4A8Q2Y0W8 1093 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 SLC9C2Q5TAH2 1124 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 MAPKAPK5Q8IW41 473 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.67■□□□□ 0.9
NELFCD-208ENST00000482747 OTUD5Q96G74 571 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 ZNF341Q9BYN7 854 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 PAG1Q9NWQ8 432 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 CSADQ9Y600 493 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 SNCAIPQ9Y6H5 919 aa20.67■□□□□ 0.9
NELFCD-208ENST00000482747 DCAF15Q66K64 600 aa20.66■□□□□ 0.9
NELFCD-208ENST00000482747 DOCK2Q92608 1830 aa20.66■□□□□ 0.9
NELFCD-208ENST00000482747 PPP4CP60510 307 aa20.65■□□□□ 0.9
NELFCD-208ENST00000482747 TTF1Q15361 905 aaPredicted RBP20.65■□□□□ 0.9
NELFCD-208ENST00000482747 ANKRD45Q5TZF3 282 aa20.65■□□□□ 0.9
NELFCD-208ENST00000482747 HAUS7Q99871 368 aa20.65■□□□□ 0.9
NELFCD-208ENST00000482747 OSBPL5Q9H0X9 879 aaPredicted RBP20.65■□□□□ 0.9
NELFCD-208ENST00000482747 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
NELFCD-208ENST00000482747 ATRNL1Q5VV63 1379 aa20.65■□□□□ 0.9
NELFCD-208ENST00000482747 MAP4K4O95819 1239 aaPredicted RBP20.64■□□□□ 0.9
NELFCD-208ENST00000482747 PDE6AP16499 860 aa20.64■□□□□ 0.9
NELFCD-208ENST00000482747 HOOK2Q96ED9 719 aa20.64■□□□□ 0.9
NELFCD-208ENST00000482747 ZNF532Q9HCE3 1301 aa20.64■□□□□ 0.89
NELFCD-208ENST00000482747 IGHDP01880 384 aa20.64■□□□□ 0.89
NELFCD-208ENST00000482747 HDAC1Q13547 482 aaPredicted RBP20.64■□□□□ 0.89
NELFCD-208ENST00000482747 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.64■□□□□ 0.89
NELFCD-208ENST00000482747 SAP30BPQ9UHR5 308 aaKnown RBP20.64■□□□□ 0.89
NELFCD-208ENST00000482747 UNCXA6NJT0 531 aa20.63■□□□□ 0.89
NELFCD-208ENST00000482747 TBC1D8O95759 1140 aa20.63■□□□□ 0.89
NELFCD-208ENST00000482747 ZBTB48P10074 688 aaPredicted RBP20.63■□□□□ 0.89
NELFCD-208ENST00000482747 TM4SF4P48230 202 aa20.63■□□□□ 0.89
NELFCD-208ENST00000482747 PALD1Q9ULE6 856 aa20.63■□□□□ 0.89
NELFCD-208ENST00000482747 FLT1P17948 1338 aa20.63■□□□□ 0.89
NELFCD-208ENST00000482747 PHF20L1A8MW92 1017 aa20.62■□□□□ 0.89
NELFCD-208ENST00000482747 B4GALNT3Q6L9W6 998 aa20.62■□□□□ 0.89
NELFCD-208ENST00000482747 ZNF112Q9UJU3 913 aa20.62■□□□□ 0.89
NELFCD-208ENST00000482747 CDK5RAP2Q96SN8 1893 aa20.62■□□□□ 0.89
NELFCD-208ENST00000482747 TCRBV5S4A2TA0A5A2 114 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 IGF2BP3O00425 579 aaKnown RBP eCLIP20.61■□□□□ 0.89
NELFCD-208ENST00000482747 CA12O43570 354 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 PLCG2P16885 1265 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 R3HDMLQ9H3Y0 253 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 CASP8AP2Q9UKL3 1982 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 IRF6O14896 467 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 SREBF2Q12772 1141 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 MS4A4AQ96JQ5 239 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 PTPN18Q99952 460 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 RIOK1Q9BRS2 568 aaKnown RBP20.61■□□□□ 0.89
NELFCD-208ENST00000482747 PRDM10Q9NQV6 1147 aa20.61■□□□□ 0.89
NELFCD-208ENST00000482747 MAGEB6P1A0A0J9YX57 407 aa20.6■□□□□ 0.89
NELFCD-208ENST00000482747 MANSC4A6NHS7 340 aaPredicted RBP20.6■□□□□ 0.89
NELFCD-208ENST00000482747 SPDYE5A6NIY4 337 aa20.6■□□□□ 0.89
NELFCD-208ENST00000482747 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
NELFCD-208ENST00000482747 CCDC84Q86UT8 332 aaPredicted RBP20.6■□□□□ 0.89
NELFCD-208ENST00000482747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.6■□□□□ 0.89
NELFCD-208ENST00000482747 USP5P45974 858 aa20.59■□□□□ 0.89
NELFCD-208ENST00000482747 ERO1BQ86YB8 467 aa20.59■□□□□ 0.89
NELFCD-208ENST00000482747 IFNL1Q8IU54 200 aa20.59■□□□□ 0.89
NELFCD-208ENST00000482747 GCC1Q96CN9 775 aa20.59■□□□□ 0.89
NELFCD-208ENST00000482747 GPATCH3Q96I76 525 aa20.59■□□□□ 0.89
NELFCD-208ENST00000482747 ADD2P35612 726 aa20.58■□□□□ 0.89
NELFCD-208ENST00000482747 MAP3K10Q02779 954 aa20.58■□□□□ 0.89
NELFCD-208ENST00000482747 RRP1BQ14684 758 aaKnown RBP20.58■□□□□ 0.89
NELFCD-208ENST00000482747 REM2Q8IYK8 340 aaPredicted RBP20.58■□□□□ 0.89
NELFCD-208ENST00000482747 LCORLQ8N3X6 602 aa20.58■□□□□ 0.89
NELFCD-208ENST00000482747 BRI3BPQ8WY22 251 aa20.58■□□□□ 0.89
NELFCD-208ENST00000482747 ARMT1Q9H993 441 aa20.58■□□□□ 0.89
NELFCD-208ENST00000482747 SAGE1Q9NXZ1 904 aa20.58■□□□□ 0.89
NELFCD-208ENST00000482747 PI4K2BQ8TCG2 481 aa20.58■□□□□ 0.88
NELFCD-208ENST00000482747 LNPKQ9C0E8 428 aa20.58■□□□□ 0.88
NELFCD-208ENST00000482747 RWDD1Q9H446 243 aaPredicted RBP20.58■□□□□ 0.88
NELFCD-208ENST00000482747 CCL15-CCL14A0A0B4J2E2 113 aa20.57■□□□□ 0.88
NELFCD-208ENST00000482747 IGSF3O75054 1194 aa20.57■□□□□ 0.88
NELFCD-208ENST00000482747 MX1P20591 662 aa20.57■□□□□ 0.88
NELFCD-208ENST00000482747 EVX2Q03828 476 aa20.57■□□□□ 0.88
NELFCD-208ENST00000482747 AAMPQ13685 434 aa20.57■□□□□ 0.88
NELFCD-208ENST00000482747 CCL15Q16663 113 aa20.57■□□□□ 0.88
NELFCD-208ENST00000482747 TNS4Q8IZW8 715 aa20.57■□□□□ 0.88
NELFCD-208ENST00000482747 SDR42E1Q8WUS8 393 aa20.57■□□□□ 0.88
NELFCD-208ENST00000482747 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
NELFCD-208ENST00000482747 FOCADQ5VW36 1801 aa20.57■□□□□ 0.88
NELFCD-208ENST00000482747 PRKAB2O43741 272 aa20.56■□□□□ 0.88
NELFCD-208ENST00000482747 SHROOM1Q2M3G4 852 aaPredicted RBP20.56■□□□□ 0.88
NELFCD-208ENST00000482747 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.56■□□□□ 0.887e-8■■■□□ 16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms