RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 TCIRG1Q13488 830 aa9.21□□□□□ -0.94
RBM39-233ENST00000482563 FNDC3BQ53EP0 1204 aaKnown RBP9.21□□□□□ -0.94
RBM39-233ENST00000482563 LRRC69Q6ZNQ3 347 aa9.21□□□□□ -0.94
RBM39-233ENST00000482563 DDX46Q7L014 1031 aaKnown RBP9.21□□□□□ -0.94
RBM39-233ENST00000482563 EEPD1Q7L9B9 569 aa9.21□□□□□ -0.94
RBM39-233ENST00000482563 BTLAQ7Z6A9 289 aa9.21□□□□□ -0.94
RBM39-233ENST00000482563 ZBTB46Q86UZ6 589 aa9.21□□□□□ -0.94
RBM39-233ENST00000482563 LEO1Q8WVC0 666 aaPredicted RBP9.21□□□□□ -0.94
RBM39-233ENST00000482563 CEP44Q9C0F1 390 aa9.21□□□□□ -0.94
RBM39-233ENST00000482563 LIN7BQ9HAP6 207 aa9.21□□□□□ -0.94
RBM39-233ENST00000482563 GOLGA6AQ9NYA3 693 aa9.21□□□□□ -0.94
RBM39-233ENST00000482563 CCDC163A0A0D9SF12 145 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 PGRP06401 933 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 ADH1AP07327 375 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 SRGNP10124 158 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 HTR3AP46098 478 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 TRIM32Q13049 653 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 ZNF280DQ6N043 979 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 NBPF10Q6P3W6 841 aaKnown RBP9.2□□□□□ -0.94
RBM39-233ENST00000482563 PAF1Q8N7H5 531 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 EHMT1Q9H9B1 1298 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 PPP2R3BQ9Y5P8 575 aa9.2□□□□□ -0.94
RBM39-233ENST00000482563 XYLBO75191 536 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 ZSCAN20P17040 1043 aaPredicted RBP9.19□□□□□ -0.94
RBM39-233ENST00000482563 TRAPPC10P48553 1259 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 DGKGP49619 791 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 STAT4Q14765 748 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 HIF1AQ16665 826 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 ADGRD1Q6QNK2 874 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 FAM43BQ6ZT52 329 aaPredicted RBP9.19□□□□□ -0.94
RBM39-233ENST00000482563 MORC1Q86VD1 984 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 RHBDD1Q8TEB9 315 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 RUNDC1Q96C34 613 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 CNTNAP3BQ96NU0 1288 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 ZSCAN10Q96SZ4 725 aaPredicted RBP9.19□□□□□ -0.94
RBM39-233ENST00000482563 MTRQ99707 1265 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 SARGQ9BW04 601 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 CNTNAP3Q9BZ76 1288 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 AS3MTQ9HBK9 375 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 SEC31BQ9NQW1 1179 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 LUZP4Q9P127 313 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 TRHDEQ9UKU6 1024 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 TCEA3O75764 348 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 PLA2G4AP47712 749 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 ZC3H12BQ5HYM0 836 aaKnown RBP9.19□□□□□ -0.94
RBM39-233ENST00000482563 FAM209AQ5JX71 171 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 CCNJLQ8IV13 435 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 PJA1Q8NG27 643 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 DDX1Q92499 740 aaKnown RBP9.19□□□□□ -0.94
RBM39-233ENST00000482563 PMEPA1Q969W9 287 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 ZHX3Q9H4I2 956 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 LRRC4BQ9NT99 713 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 USP25Q9UHP3 1055 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 POLR3KQ9Y2Y1 108 aaPredicted RBP9.19□□□□□ -0.94
RBM39-233ENST00000482563 PCDHB14Q9Y5E9 798 aa9.19□□□□□ -0.94
RBM39-233ENST00000482563 EDN3P14138 238 aa9.18□□□□□ -0.94
RBM39-233ENST00000482563 LIG1P18858 919 aa9.18□□□□□ -0.94
RBM39-233ENST00000482563 GRIA4P48058 902 aa9.18□□□□□ -0.94
RBM39-233ENST00000482563 FAAP100Q0VG06 881 aa9.18□□□□□ -0.94
RBM39-233ENST00000482563 RNF219Q5W0B1 726 aaPredicted RBP9.18□□□□□ -0.94
RBM39-233ENST00000482563 TPH2Q8IWU9 490 aa9.18□□□□□ -0.94
RBM39-233ENST00000482563 COG1Q8WTW3 980 aa9.18□□□□□ -0.94
RBM39-233ENST00000482563 NEUROD6Q96NK8 337 aa9.18□□□□□ -0.94
RBM39-233ENST00000482563 MIR1-1HGQ9H1L0 117 aa9.18□□□□□ -0.94
RBM39-233ENST00000482563 PIP5K1CO60331 668 aa9.17□□□□□ -0.94
RBM39-233ENST00000482563 LDHCP07864 332 aa9.17□□□□□ -0.94
RBM39-233ENST00000482563 PCBP1Q15365 356 aaKnown RBP eCLIP9.17□□□□□ -0.94
RBM39-233ENST00000482563 NLRP13Q86W25 1043 aa9.17□□□□□ -0.94
RBM39-233ENST00000482563 STRBPQ96SI9 672 aaKnown RBP9.17□□□□□ -0.94
RBM39-233ENST00000482563 SUSD5O60279 629 aa9.17□□□□□ -0.94
RBM39-233ENST00000482563 ACPPP15309 386 aa9.17□□□□□ -0.94
RBM39-233ENST00000482563 ZYXQ15942 572 aaKnown RBP9.17□□□□□ -0.94
RBM39-233ENST00000482563 SEPT7Q16181 437 aaKnown RBP9.17□□□□□ -0.94
RBM39-233ENST00000482563 YOD1Q5VVQ6 348 aaPredicted RBP9.17□□□□□ -0.94
RBM39-233ENST00000482563 TMEM214Q6NUQ4 689 aaKnown RBP9.17□□□□□ -0.94
RBM39-233ENST00000482563 SPNS2Q8IVW8 549 aa9.17□□□□□ -0.94
RBM39-233ENST00000482563 CNPY4Q8N129 248 aa9.17□□□□□ -0.94
RBM39-233ENST00000482563 LRRC47Q8N1G4 583 aaKnown RBP9.17□□□□□ -0.94
RBM39-233ENST00000482563 USP33Q8TEY7 942 aa9.17□□□□□ -0.94
RBM39-233ENST00000482563 WNT2BQ93097 391 aa9.17□□□□□ -0.94
RBM39-233ENST00000482563 NGRNQ9NPE2 291 aaKnown RBP9.17□□□□□ -0.94
RBM39-233ENST00000482563 INTS7Q9NVH2 962 aaKnown RBP9.17□□□□□ -0.94
RBM39-233ENST00000482563 KLRG2A4D1S0 409 aaPredicted RBP9.16□□□□□ -0.94
RBM39-233ENST00000482563 MEN1O00255 615 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 APAF1O14727 1248 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 DNAJC8O75937 253 aaPredicted RBP9.16□□□□□ -0.94
RBM39-233ENST00000482563 ADH1CP00326 375 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 EGFRP00533 1210 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 MYL3P08590 195 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 CPEP16870 476 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 SPRED3Q2MJR0 410 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 C4orf17Q53FE4 359 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 PKN3Q6P5Z2 889 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 CACTIN-AS1Q8N1I8 211 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 CNTD1Q8N815 330 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 DHRS4Q9BTZ2 278 aa9.16□□□□□ -0.94
RBM39-233ENST00000482563 LTBP3Q9NS15 1303 aa9.15□□□□□ -0.94
RBM39-233ENST00000482563 METTL12A8MUP2 240 aa9.15□□□□□ -0.94
RBM39-233ENST00000482563 ARAFP10398 606 aa9.15□□□□□ -0.94
RBM39-233ENST00000482563 ITPKAP23677 461 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms