RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 CCDC102BQ68D86 513 aa14.32□□□□□ -0.12
GARNL3-217ENST00000481875 PTCH2Q9Y6C5 1203 aa14.32□□□□□ -0.12
GARNL3-217ENST00000481875 MGAMO43451 1857 aa14.31□□□□□ -0.12
GARNL3-217ENST00000481875 BCAR3O75815 825 aa14.31□□□□□ -0.12
GARNL3-217ENST00000481875 MAP4K4O95819 1239 aaPredicted RBP14.31□□□□□ -0.12
GARNL3-217ENST00000481875 GNAI3P08754 354 aa14.31□□□□□ -0.12
GARNL3-217ENST00000481875 EN2P19622 333 aaPredicted RBP14.31□□□□□ -0.12
GARNL3-217ENST00000481875 SLF2Q8IX21 1173 aa14.31□□□□□ -0.12
GARNL3-217ENST00000481875 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.31□□□□□ -0.12
GARNL3-217ENST00000481875 SIL1Q9H173 461 aa14.31□□□□□ -0.12
GARNL3-217ENST00000481875 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
GARNL3-217ENST00000481875 AKAP2Q9Y2D5 859 aa14.31□□□□□ -0.12
GARNL3-217ENST00000481875 SLC45A1Q9Y2W3 748 aa14.31□□□□□ -0.12
GARNL3-217ENST00000481875 PHIPQ8WWQ0 1821 aa14.31□□□□□ -0.12
GARNL3-217ENST00000481875 RANBP2P49792 3224 aaKnown RBP14.3□□□□□ -0.12
GARNL3-217ENST00000481875 ZSWIM8A7E2V4 1837 aa14.3□□□□□ -0.12
GARNL3-217ENST00000481875 PDHXO00330 501 aa14.3□□□□□ -0.12
GARNL3-217ENST00000481875 TCP10Q12799 353 aa14.3□□□□□ -0.12
GARNL3-217ENST00000481875 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
GARNL3-217ENST00000481875 MEIS3Q99687 375 aa14.3□□□□□ -0.12
GARNL3-217ENST00000481875 TBC1D12O60347 775 aa14.29□□□□□ -0.12
GARNL3-217ENST00000481875 HOXD10P28358 340 aa14.29□□□□□ -0.12
GARNL3-217ENST00000481875 RASGRF1Q13972 1273 aa14.29□□□□□ -0.12
GARNL3-217ENST00000481875 ARHGAP39Q9C0H5 1083 aa14.29□□□□□ -0.12
GARNL3-217ENST00000481875 SRRDQ9UH36 339 aa14.29□□□□□ -0.12
GARNL3-217ENST00000481875 PA2G4Q9UQ80 394 aaKnown RBP14.29□□□□□ -0.12
GARNL3-217ENST00000481875 DOCK3Q8IZD9 2030 aa14.29□□□□□ -0.12
GARNL3-217ENST00000481875 GPR75-ASB3A0A0A6YYF3 556 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 A0A0G2JLL6 359 aaPredicted RBP14.28□□□□□ -0.12
GARNL3-217ENST00000481875 IPO8O15397 1037 aaKnown RBP14.28□□□□□ -0.12
GARNL3-217ENST00000481875 CTNND1O60716 968 aaKnown RBP14.28□□□□□ -0.12
GARNL3-217ENST00000481875 COL2A1P02458 1487 aaPredicted RBP14.28□□□□□ -0.12
GARNL3-217ENST00000481875 BCRP11274 1271 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 CAPN2P17655 700 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 ADORA1P30542 326 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 RGS3P49796 1198 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 TIMM10P62072 90 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 DOCK1Q14185 1865 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 MVPQ14764 893 aaKnown RBP14.28□□□□□ -0.12
GARNL3-217ENST00000481875 GPAT2Q6NUI2 795 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 FASTKD5Q7L8L6 764 aaKnown RBP14.28□□□□□ -0.12
GARNL3-217ENST00000481875 PRRT2Q7Z6L0 340 aaPredicted RBP14.28□□□□□ -0.12
GARNL3-217ENST00000481875 ZFPM1Q8IX07 1006 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 SCYL3Q8IZE3 742 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 FRAT1Q92837 279 aaPredicted RBP14.28□□□□□ -0.12
GARNL3-217ENST00000481875 TRIM47Q96LD4 638 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 AFG3L2Q9Y4W6 797 aa14.28□□□□□ -0.12
GARNL3-217ENST00000481875 A0A1B0GUL7 405 aa14.27□□□□□ -0.13
GARNL3-217ENST00000481875 IGSF3O75054 1194 aa14.27□□□□□ -0.13
GARNL3-217ENST00000481875 PTPRAP18433 802 aa14.27□□□□□ -0.13
GARNL3-217ENST00000481875 CTGFP29279 349 aa14.27□□□□□ -0.13
GARNL3-217ENST00000481875 PSMC4P43686 418 aa14.27□□□□□ -0.13
GARNL3-217ENST00000481875 SH3BP5LQ7L8J4 393 aa14.27□□□□□ -0.13
GARNL3-217ENST00000481875 XAGE2Q96GT9 111 aa14.27□□□□□ -0.13
GARNL3-217ENST00000481875 PARK7Q99497 189 aaKnown RBP14.27□□□□□ -0.13
GARNL3-217ENST00000481875 TRIOBPQ9H2D6 2365 aa14.27□□□□□ -0.13
GARNL3-217ENST00000481875 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
GARNL3-217ENST00000481875 SRGAP3O43295 1099 aa14.26□□□□□ -0.13
GARNL3-217ENST00000481875 RHBDL3P58872 404 aa14.26□□□□□ -0.13
GARNL3-217ENST00000481875 HABP4Q5JVS0 413 aaKnown RBP14.26□□□□□ -0.13
GARNL3-217ENST00000481875 NKX2-3Q8TAU0 364 aa14.26□□□□□ -0.13
GARNL3-217ENST00000481875 ZNF384Q8TF68 577 aa14.26□□□□□ -0.13
GARNL3-217ENST00000481875 CPA4Q9UI42 421 aa14.26□□□□□ -0.13
GARNL3-217ENST00000481875 ZHX2Q9Y6X8 837 aa14.26□□□□□ -0.13
GARNL3-217ENST00000481875 DDTLA6NHG4 134 aaPredicted RBP14.25□□□□□ -0.13
GARNL3-217ENST00000481875 OSBPP22059 807 aa14.25□□□□□ -0.13
GARNL3-217ENST00000481875 ARID4AP29374 1257 aaPredicted RBP14.25□□□□□ -0.13
GARNL3-217ENST00000481875 TFCP2Q12800 502 aa14.25□□□□□ -0.13
GARNL3-217ENST00000481875 SLC4A8Q2Y0W8 1093 aa14.25□□□□□ -0.13
GARNL3-217ENST00000481875 ZKSCAN2Q63HK3 967 aa14.25□□□□□ -0.13
GARNL3-217ENST00000481875 DZIP1Q86YF9 867 aaKnown RBP14.25□□□□□ -0.13
GARNL3-217ENST00000481875 TBC1D2Q9BYX2 928 aa14.25□□□□□ -0.13
GARNL3-217ENST00000481875 PICK1Q9NRD5 415 aa14.25□□□□□ -0.13
GARNL3-217ENST00000481875 LDHCP07864 332 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 TRIM27P14373 513 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 GRK4P32298 578 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 GSTO1P78417 241 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 MECOMQ03112 1051 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 ERICH6Q7L0X2 663 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 UBE2Q1Q7Z7E8 422 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 SH3TC2Q8TF17 1288 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 NSUN4Q96CB9 384 aaKnown RBP14.24□□□□□ -0.13
GARNL3-217ENST00000481875 DDX4Q9NQI0 724 aaKnown RBP14.24□□□□□ -0.13
GARNL3-217ENST00000481875 HMG20BQ9P0W2 317 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 ABCF2Q9UG63 623 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 SZT2Q5T011 3432 aa14.24□□□□□ -0.13
GARNL3-217ENST00000481875 GNAI2P04899 355 aa14.23□□□□□ -0.13
GARNL3-217ENST00000481875 GJB1P08034 283 aa14.23□□□□□ -0.13
GARNL3-217ENST00000481875 BTDP43251 543 aa14.23□□□□□ -0.13
GARNL3-217ENST00000481875 GJA8P48165 433 aa14.23□□□□□ -0.13
GARNL3-217ENST00000481875 FCGRTP55899 365 aa14.23□□□□□ -0.13
GARNL3-217ENST00000481875 ATF7IPQ6VMQ6 1270 aa14.23□□□□□ -0.13
GARNL3-217ENST00000481875 SPATA5Q8NB90 893 aa14.23□□□□□ -0.13
GARNL3-217ENST00000481875 OSBPL5Q9H0X9 879 aaPredicted RBP14.23□□□□□ -0.13
GARNL3-217ENST00000481875 GPR108Q9NPR9 543 aa14.23□□□□□ -0.13
GARNL3-217ENST00000481875 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.23□□□□□ -0.13
GARNL3-217ENST00000481875 MYPNQ86TC9 1320 aa14.22□□□□□ -0.13
GARNL3-217ENST00000481875 FMNL1O95466 1100 aaPredicted RBP14.22□□□□□ -0.13
GARNL3-217ENST00000481875 CYP2C8P10632 490 aa14.22□□□□□ -0.13
GARNL3-217ENST00000481875 IRF5Q13568 498 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms