RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
ABCF3-213ENST00000480539 SAPCD2Q86UD0 394 aa18.28■□□□□ 0.52
ABCF3-213ENST00000480539 TGFBRAP1Q8WUH2 860 aa18.28■□□□□ 0.52
ABCF3-213ENST00000480539 OSBPL5Q9H0X9 879 aaPredicted RBP18.28■□□□□ 0.52
ABCF3-213ENST00000480539 ARMT1Q9H993 441 aa18.28■□□□□ 0.52
ABCF3-213ENST00000480539 MKRN1Q9UHC7 482 aaKnown RBP18.28■□□□□ 0.52
ABCF3-213ENST00000480539 RNF113AO15541 343 aaKnown RBP18.27■□□□□ 0.52
ABCF3-213ENST00000480539 SH3BP5LQ7L8J4 393 aa18.27■□□□□ 0.52
ABCF3-213ENST00000480539 CERS3Q8IU89 383 aa18.27■□□□□ 0.52
ABCF3-213ENST00000480539 ZSCAN29Q8IWY8 852 aaPredicted RBP18.27■□□□□ 0.52
ABCF3-213ENST00000480539 RILPL2Q969X0 211 aa18.27■□□□□ 0.52
ABCF3-213ENST00000480539 EVI5LQ96CN4 794 aa18.27■□□□□ 0.52
ABCF3-213ENST00000480539 PUS7LQ9H0K6 701 aaKnown RBP18.27■□□□□ 0.52
ABCF3-213ENST00000480539 ANGEL1Q9UNK9 670 aaKnown RBP18.27■□□□□ 0.52
ABCF3-213ENST00000480539 COL2A1P02458 1487 aaPredicted RBP18.26■□□□□ 0.51
ABCF3-213ENST00000480539 DDTLA6NHG4 134 aaPredicted RBP18.26■□□□□ 0.51
ABCF3-213ENST00000480539 UBE2Q2LH0YL09 131 aa18.26■□□□□ 0.51
ABCF3-213ENST00000480539 USP5P45974 858 aa18.26■□□□□ 0.51
ABCF3-213ENST00000480539 FKBP1BP68106 108 aa18.26■□□□□ 0.51
ABCF3-213ENST00000480539 SLC4A8Q2Y0W8 1093 aa18.26■□□□□ 0.51
ABCF3-213ENST00000480539 ERICH6BQ5W0A0 696 aa18.26■□□□□ 0.51
ABCF3-213ENST00000480539 APPBP2Q92624 585 aa18.26■□□□□ 0.51
ABCF3-213ENST00000480539 AIDAQ96BJ3 306 aa18.26■□□□□ 0.51
ABCF3-213ENST00000480539 CSRNP1Q96S65 589 aa18.26■□□□□ 0.51
ABCF3-213ENST00000480539 PPP4R2Q9NY27 417 aa18.26■□□□□ 0.51
ABCF3-213ENST00000480539 RASSF10A6NK89 507 aa18.25■□□□□ 0.51
ABCF3-213ENST00000480539 M0R2C6 588 aa18.25■□□□□ 0.51
ABCF3-213ENST00000480539 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-213ENST00000480539 GSPT1P15170 499 aaKnown RBP18.25■□□□□ 0.51
ABCF3-213ENST00000480539 GRM1Q13255 1194 aa18.25■□□□□ 0.51
ABCF3-213ENST00000480539 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
ABCF3-213ENST00000480539 TTC22Q5TAA0 569 aa18.25■□□□□ 0.51
ABCF3-213ENST00000480539 ARMC9Q7Z3E5 817 aa18.25■□□□□ 0.51
ABCF3-213ENST00000480539 OSBP2Q969R2 916 aa18.25■□□□□ 0.51
ABCF3-213ENST00000480539 CRNKL1Q9BZJ0 848 aaKnown RBP18.25■□□□□ 0.51
ABCF3-213ENST00000480539 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-213ENST00000480539 SAP30BPQ9UHR5 308 aaKnown RBP18.25■□□□□ 0.51
ABCF3-213ENST00000480539 ATRNL1Q5VV63 1379 aa18.25■□□□□ 0.51
ABCF3-213ENST00000480539 SIPA1L1O43166 1804 aa18.25■□□□□ 0.51
ABCF3-213ENST00000480539 AK9Q5TCS8 1911 aa18.25■□□□□ 0.51
ABCF3-213ENST00000480539 PPP1R12BO60237 982 aaPredicted RBP18.24■□□□□ 0.51
ABCF3-213ENST00000480539 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
ABCF3-213ENST00000480539 CYP4F22Q6NT55 531 aa18.24■□□□□ 0.51
ABCF3-213ENST00000480539 SDR42E1Q8WUS8 393 aa18.24■□□□□ 0.51
ABCF3-213ENST00000480539 PRKAB2O43741 272 aa18.23■□□□□ 0.51
ABCF3-213ENST00000480539 SLURP2P0DP57 97 aa18.23■□□□□ 0.51
ABCF3-213ENST00000480539 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
ABCF3-213ENST00000480539 DEFB115Q30KQ5 88 aa18.23■□□□□ 0.51
ABCF3-213ENST00000480539 ZMYM1Q5SVZ6 1142 aa18.23■□□□□ 0.51
ABCF3-213ENST00000480539 MIGA2Q7L4E1 593 aa18.23■□□□□ 0.51
ABCF3-213ENST00000480539 HOOK2Q96ED9 719 aa18.23■□□□□ 0.51
ABCF3-213ENST00000480539 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
ABCF3-213ENST00000480539 FAM196BA6NMK8 535 aa18.22■□□□□ 0.51
ABCF3-213ENST00000480539 USP2O75604 605 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-213ENST00000480539 DCAF15Q66K64 600 aa18.22■□□□□ 0.51
ABCF3-213ENST00000480539 WRNIP1Q96S55 665 aa18.22■□□□□ 0.51
ABCF3-213ENST00000480539 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
ABCF3-213ENST00000480539 SLC4A4Q9Y6R1 1079 aa18.22■□□□□ 0.51
ABCF3-213ENST00000480539 MYH1P12882 1939 aa18.21■□□□□ 0.51
ABCF3-213ENST00000480539 THSD7BQ9C0I4 1608 aa18.21■□□□□ 0.51
ABCF3-213ENST00000480539 GPAA1O43292 621 aa18.21■□□□□ 0.51
ABCF3-213ENST00000480539 VEGFBP49765 207 aa18.21■□□□□ 0.51
ABCF3-213ENST00000480539 MAP3K11Q16584 847 aa18.21■□□□□ 0.51
ABCF3-213ENST00000480539 RGMBQ6NW40 437 aa18.21■□□□□ 0.51
ABCF3-213ENST00000480539 KLRG1Q96E93 195 aa18.21■□□□□ 0.51
ABCF3-213ENST00000480539 CLMNQ96JQ2 1002 aa18.21■□□□□ 0.51
ABCF3-213ENST00000480539 CAPNS2Q96L46 248 aa18.21■□□□□ 0.51
ABCF3-213ENST00000480539 A0A0D9SFI3 127 aa18.2■□□□□ 0.5
ABCF3-213ENST00000480539 SDSP20132 328 aa18.2■□□□□ 0.5
ABCF3-213ENST00000480539 ZNF157P51786 506 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-213ENST00000480539 NMIQ13287 307 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-213ENST00000480539 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
ABCF3-213ENST00000480539 RASAL3Q86YV0 1011 aa18.2■□□□□ 0.5
ABCF3-213ENST00000480539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.2■□□□□ 0.5
ABCF3-213ENST00000480539 HHIPL1Q96JK4 782 aa18.2■□□□□ 0.5
ABCF3-213ENST00000480539 FAM227BQ96M60 508 aa18.2■□□□□ 0.5
ABCF3-213ENST00000480539 ZNF341Q9BYN7 854 aa18.2■□□□□ 0.5
ABCF3-213ENST00000480539 DCP1AQ9NPI6 582 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-213ENST00000480539 CEP350Q5VT06 3117 aa18.19■□□□□ 0.5
ABCF3-213ENST00000480539 HLA-DOAP06340 250 aa18.19■□□□□ 0.5
ABCF3-213ENST00000480539 VGLL4Q14135 290 aa18.19■□□□□ 0.5
ABCF3-213ENST00000480539 LDLRAD1Q5T700 205 aa18.19■□□□□ 0.5
ABCF3-213ENST00000480539 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
ABCF3-213ENST00000480539 STRBPQ96SI9 672 aaKnown RBP18.19■□□□□ 0.5
ABCF3-213ENST00000480539 DHX36Q9H2U1 1008 aaKnown RBP18.19■□□□□ 0.5
ABCF3-213ENST00000480539 AOC2O75106 756 aa18.18■□□□□ 0.5
ABCF3-213ENST00000480539 SLC10A3P09131 477 aa18.18■□□□□ 0.5
ABCF3-213ENST00000480539 INPP5BP32019 993 aa18.18■□□□□ 0.5
ABCF3-213ENST00000480539 EVX2Q03828 476 aa18.18■□□□□ 0.5
ABCF3-213ENST00000480539 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
ABCF3-213ENST00000480539 ANKRD13AQ8IZ07 590 aa18.18■□□□□ 0.5
ABCF3-213ENST00000480539 ZKSCAN4Q969J2 545 aaPredicted RBP18.18■□□□□ 0.5
ABCF3-213ENST00000480539 ELP3Q9H9T3 547 aa18.18■□□□□ 0.5
ABCF3-213ENST00000480539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.18■□□□□ 0.5
ABCF3-213ENST00000480539 EPB41L4AQ9HCS5 686 aaPredicted RBP18.18■□□□□ 0.5
ABCF3-213ENST00000480539 DIAPH3Q9NSV4 1193 aa18.18■□□□□ 0.5
ABCF3-213ENST00000480539 MCM9Q9NXL9 1143 aa18.18■□□□□ 0.5
ABCF3-213ENST00000480539 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
ABCF3-213ENST00000480539 BAZ2AQ9UIF9 1905 aaKnown RBP18.17■□□□□ 0.5
ABCF3-213ENST00000480539 CYP2D6P10635 497 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms